Click here to switch to the map view.

The map label for this gene is CooC

Identifier: 45358540

GI number: 45358540

Start: 963269

End: 964051

Strand: Direct

Name: CooC

Synonym: MMP0977

Alternate gene names: NA

Gene position: 963269-964051 (Clockwise)

Preceding gene: 45358539

Following gene: 45358553

Centisome position: 57.99

GC content: 32.06

Gene sequence:

>783_bases
ATGAAGATTGCAATTACTGGAAAAGGCGGAGTTGGAAAAACAACATTTTCCGGAACTTTAGCCTGCATTTTATCAGAAAA
ATACAAAGTTTATGCAATAGATGCCGACCCGGACATGAATTTAGCATCAAGTCTTGGAATAACTGAAAAAATAACTCCGA
TTTCAAAAATGAAAGACTTAATAAAAGAAAGAACCTGTGCTGAGCAGGGTTCATCTTTTGGAGAAGTTTTTAAAATAAAT
CCAAAAACTAGCGACCTTCCAGAAAAATTATCAGTAAATTATGATAAAAATGGAAACTTAAAAATAATGGTCATGGGGAC
CGTTGAAAAAGGAGGAACTGGCTGTGTCTGTCCTGCATCAGTTCTTTTAAAAGCACTTATTCGAAATTTAATTTTAAAAA
AAGACGAAGTTGTAATTTTGGATATGGAAGCAGGAATCGAACATTTGGGTAGAAAAACCGCGGAAGCTGTCGATGTAATG
ATTATTGTTTCGGAAGCAAGCTCAAAATCTATGGAAACCGTTGAAAGAATTAAAAAACTTGCTGAAGAAATTGGAATTAA
AAAAATTGTATGCGTTTTAAATAAAATTTCAAATGAAACTGAAAAAAGTTTTGCGAAAGAAAATTTAAATAGAATCGGCC
TTGAAATACTAGGATGCATCCCATATGACTCGGAAGTATCTGTTGCAGATATGAAAAGAGAGCCACTTGTACTTTACGAA
AATTCAAAAGCGAAAAATGCAATTAAAGAAATTTCAGAAAAAATAATGAATCTTAAAAATTAA

Upstream 100 bases:

>100_bases
GATCAGACTTTTTTCAGATGAAGAAAGTGGAAGATACAAAGCTGCTACATTTCATCACGACGCATTTGAAAAAGCATTAA
AAAAGAAATCTGGTGAATAA

Downstream 100 bases:

>100_bases
AAAATTATAATTCGGTTACAATTATTTTATGGCATTCCAAATCTAAAACATTGAATTTTGCCTTGATTTCTTTTTTATTG
TTTAGTATATCGTAAAGTTC

Product: CO dehydrogenase maturation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKIAITGKGGVGKTTFSGTLACILSEKYKVYAIDADPDMNLASSLGITEKITPISKMKDLIKERTCAEQGSSFGEVFKIN
PKTSDLPEKLSVNYDKNGNLKIMVMGTVEKGGTGCVCPASVLLKALIRNLILKKDEVVILDMEAGIEHLGRKTAEAVDVM
IIVSEASSKSMETVERIKKLAEEIGIKKIVCVLNKISNETEKSFAKENLNRIGLEILGCIPYDSEVSVADMKREPLVLYE
NSKAKNAIKEISEKIMNLKN

Sequences:

>Translated_260_residues
MKIAITGKGGVGKTTFSGTLACILSEKYKVYAIDADPDMNLASSLGITEKITPISKMKDLIKERTCAEQGSSFGEVFKIN
PKTSDLPEKLSVNYDKNGNLKIMVMGTVEKGGTGCVCPASVLLKALIRNLILKKDEVVILDMEAGIEHLGRKTAEAVDVM
IIVSEASSKSMETVERIKKLAEEIGIKKIVCVLNKISNETEKSFAKENLNRIGLEILGCIPYDSEVSVADMKREPLVLYE
NSKAKNAIKEISEKIMNLKN
>Mature_260_residues
MKIAITGKGGVGKTTFSGTLACILSEKYKVYAIDADPDMNLASSLGITEKITPISKMKDLIKERTCAEQGSSFGEVFKIN
PKTSDLPEKLSVNYDKNGNLKIMVMGTVEKGGTGCVCPASVLLKALIRNLILKKDEVVILDMEAGIEHLGRKTAEAVDVM
IIVSEASSKSMETVERIKKLAEEIGIKKIVCVLNKISNETEKSFAKENLNRIGLEILGCIPYDSEVSVADMKREPLVLYE
NSKAKNAIKEISEKIMNLKN

Specific function: Unknown

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0084 and MJ0685 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR014433 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28390; Mature: 28390

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAITGKGGVGKTTFSGTLACILSEKYKVYAIDADPDMNLASSLGITEKITPISKMKDL
CEEEEECCCCCCCCCHHHHEEEEEECCEEEEEEECCCCCCHHHHCCCCHHCCCHHHHHHH
IKERTCAEQGSSFGEVFKINPKTSDLPEKLSVNYDKNGNLKIMVMGTVEKGGTGCVCPAS
HHHHHHHHCCCCCCCEEEECCCCCCCCHHHEECCCCCCCEEEEEEEEECCCCCCCCCHHH
VLLKALIRNLILKKDEVVILDMEAGIEHLGRKTAEAVDVMIIVSEASSKSMETVERIKKL
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHH
AEEIGIKKIVCVLNKISNETEKSFAKENLNRIGLEILGCIPYDSEVSVADMKREPLVLYE
HHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCEEEEE
NSKAKNAIKEISEKIMNLKN
CCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIAITGKGGVGKTTFSGTLACILSEKYKVYAIDADPDMNLASSLGITEKITPISKMKDL
CEEEEECCCCCCCCCHHHHEEEEEECCEEEEEEECCCCCCHHHHCCCCHHCCCHHHHHHH
IKERTCAEQGSSFGEVFKINPKTSDLPEKLSVNYDKNGNLKIMVMGTVEKGGTGCVCPAS
HHHHHHHHCCCCCCCEEEECCCCCCCCHHHEECCCCCCCEEEEEEEEECCCCCCCCCHHH
VLLKALIRNLILKKDEVVILDMEAGIEHLGRKTAEAVDVMIIVSEASSKSMETVERIKKL
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHH
AEEIGIKKIVCVLNKISNETEKSFAKENLNRIGLEILGCIPYDSEVSVADMKREPLVLYE
HHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCEEEEE
NSKAKNAIKEISEKIMNLKN
CCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]