Definition Methanococcus maripaludis S2 chromosome, complete genome.
Accession NC_005791
Length 1,661,137

Click here to switch to the map view.

The map label for this gene is 45358524

Identifier: 45358524

GI number: 45358524

Start: 949611

End: 951110

Strand: Direct

Name: 45358524

Synonym: MMP0961

Alternate gene names: NA

Gene position: 949611-951110 (Clockwise)

Preceding gene: 45358519

Following gene: 45358525

Centisome position: 57.17

GC content: 36.47

Gene sequence:

>1500_bases
ATGGAAGAAATATATTCAAAAATGGTTAATGAAGCAATGGCCGCTCAATGGGCGGATGTAAATATAATTAAAGAAAAAAG
AGGGCATGAATTTAAGATAAAACATGCTAAAGGATACGTAGATGTTGCAAATAAGATGGAAGCGGTTGGAAAGCAGGATC
CTTCAGTAATTAAATTACATAAAGATTCGATTAATGCACATTTCGATATTTTATCGGAACTTACCAAAACTGTAAGGCCT
GAAGATGACCCATTTGTTGAACACTATCAAACTCCAGCTATACTTGAAATACTTTACAAAGAAGACCCAGAATTTAGAAA
AAGTGTTGAAAAATTTATTCAAACAATTGAAAAATCAGAAGCGCTTATAGGTAAAGAAGTTCTCAGAAGGTATGGTGGTT
TTTATGGGCCTACCTGTGTTGTAGACTTCGCATTGATTCCTGGAAGCACTAGTAACATCGTAAACAGGATTCTTAAAAAT
GTAGATATTCCAATTGCACACAAACAGGCAATTTTAGCGTCAAAATCATGGGGAATGAATACATCCTATGGTTTTGGGGA
AAAATTTACAAATGCAATTGAAGCAGGAAAATCATTAAATGAAGCCATTAAAGAAGAAATTGAAATGATAAAATTCATTT
ATGACAAACCAATTGATGCTCAAGCAAAACTTATGGACGATTTCGGCCATGAAAGCTTCGATGTTAGAAAATATATGGGA
GAATACAAAAAGAAAATGGAACCTGCAGTAGCTGCTGCAATGGAATCAGAAGTTCATTACGGAAACATTGTAACTATTCC
GGCATACTGTGTTGGAGATATTGCACACCACGTTGCCCAGTCAACATTTAACATGTGCAAAGATGACGTTGTAATGGGCG
TAATCGAAGCTGTTTCAACAGTAATGGACAATACGTTAAGATCCAATGTGAAAAACTTCAAAAATGAATATGAAGTATTA
TCTCTTGCAACAGGATCGACTGCAGCTGCAACAGAATGTATACTTGAATTAGATGGATTTAATGCACCAACAGTTGTAGA
TTTACTTACGAAAAGATTCCACAACTACGTACAGCTCTACCCGACAAGAGGTGCTGCTGCAGAACTTCACAACCACGACT
TCATGGACATGATTTATAGAGGTTGGAAGTTAATTGATAAAGCTCGAAGAGTTAAAAATGGAAGCGATGCCCCAATAACT
CCAAAAATAGGTAATTTCAAAGTAGATCTTGATCCTATCTTCAAAAATGAAGTTATTATGAACCCGCAAAGATATGCATA
CCCTGCTTGCGCAATAACAGTTAGATTTTCAGCACTGATGAGGCTTGCAGACTATCCATGTCTTTTAACGAGTGAACCAG
TAACTGCAACAATGATGACAAACATTATTGCACTGCATAAAGAAACACCTGGAGCTCCTGCAAGAGTTTGTAAAGACTGT
GCAACCGCTTGTTTGGTGGACTTTAGACATCAATACTGCCAGTACAGAGAAGCAGTATAA

Upstream 100 bases:

>100_bases
TTTTTATATGGCTAATAATTAAACAAACTGCCTGTAAATTAAATAGGGCGCTGTTTAAAGCTTGAGCCGTTTAGGTATCC
AATCAATAGGGGGATAGGAT

Downstream 100 bases:

>100_bases
TTTATAACTATTTTCATTTTTAACGGAGGGGTAAAATGAAGTGTTATCTCTGTAAATTAGAAGGAAAAGATACCGATGCA
GTAGCTTCGTGCATAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MEEIYSKMVNEAMAAQWADVNIIKEKRGHEFKIKHAKGYVDVANKMEAVGKQDPSVIKLHKDSINAHFDILSELTKTVRP
EDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIQTIEKSEALIGKEVLRRYGGFYGPTCVVDFALIPGSTSNIVNRILKN
VDIPIAHKQAILASKSWGMNTSYGFGEKFTNAIEAGKSLNEAIKEEIEMIKFIYDKPIDAQAKLMDDFGHESFDVRKYMG
EYKKKMEPAVAAAMESEVHYGNIVTIPAYCVGDIAHHVAQSTFNMCKDDVVMGVIEAVSTVMDNTLRSNVKNFKNEYEVL
SLATGSTAAATECILELDGFNAPTVVDLLTKRFHNYVQLYPTRGAAAELHNHDFMDMIYRGWKLIDKARRVKNGSDAPIT
PKIGNFKVDLDPIFKNEVIMNPQRYAYPACAITVRFSALMRLADYPCLLTSEPVTATMMTNIIALHKETPGAPARVCKDC
ATACLVDFRHQYCQYREAV

Sequences:

>Translated_499_residues
MEEIYSKMVNEAMAAQWADVNIIKEKRGHEFKIKHAKGYVDVANKMEAVGKQDPSVIKLHKDSINAHFDILSELTKTVRP
EDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIQTIEKSEALIGKEVLRRYGGFYGPTCVVDFALIPGSTSNIVNRILKN
VDIPIAHKQAILASKSWGMNTSYGFGEKFTNAIEAGKSLNEAIKEEIEMIKFIYDKPIDAQAKLMDDFGHESFDVRKYMG
EYKKKMEPAVAAAMESEVHYGNIVTIPAYCVGDIAHHVAQSTFNMCKDDVVMGVIEAVSTVMDNTLRSNVKNFKNEYEVL
SLATGSTAAATECILELDGFNAPTVVDLLTKRFHNYVQLYPTRGAAAELHNHDFMDMIYRGWKLIDKARRVKNGSDAPIT
PKIGNFKVDLDPIFKNEVIMNPQRYAYPACAITVRFSALMRLADYPCLLTSEPVTATMMTNIIALHKETPGAPARVCKDC
ATACLVDFRHQYCQYREAV
>Mature_499_residues
MEEIYSKMVNEAMAAQWADVNIIKEKRGHEFKIKHAKGYVDVANKMEAVGKQDPSVIKLHKDSINAHFDILSELTKTVRP
EDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIQTIEKSEALIGKEVLRRYGGFYGPTCVVDFALIPGSTSNIVNRILKN
VDIPIAHKQAILASKSWGMNTSYGFGEKFTNAIEAGKSLNEAIKEEIEMIKFIYDKPIDAQAKLMDDFGHESFDVRKYMG
EYKKKMEPAVAAAMESEVHYGNIVTIPAYCVGDIAHHVAQSTFNMCKDDVVMGVIEAVSTVMDNTLRSNVKNFKNEYEVL
SLATGSTAAATECILELDGFNAPTVVDLLTKRFHNYVQLYPTRGAAAELHNHDFMDMIYRGWKLIDKARRVKNGSDAPIT
PKIGNFKVDLDPIFKNEVIMNPQRYAYPACAITVRFSALMRLADYPCLLTSEPVTATMMTNIIALHKETPGAPARVCKDC
ATACLVDFRHQYCQYREAV

Specific function: Unknown

COG id: COG4883

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56158; Mature: 56158

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIYSKMVNEAMAAQWADVNIIKEKRGHEFKIKHAKGYVDVANKMEAVGKQDPSVIKLH
CHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEE
KDSINAHFDILSELTKTVRPEDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIQTIEKSE
CCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ALIGKEVLRRYGGFYGPTCVVDFALIPGSTSNIVNRILKNVDIPIAHKQAILASKSWGMN
HHHHHHHHHHHCCCCCCHHHEEEHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
TSYGFGEKFTNAIEAGKSLNEAIKEEIEMIKFIYDKPIDAQAKLMDDFGHESFDVRKYMG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHH
EYKKKMEPAVAAAMESEVHYGNIVTIPAYCVGDIAHHVAQSTFNMCKDDVVMGVIEAVST
HHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMDNTLRSNVKNFKNEYEVLSLATGSTAAATECILELDGFNAPTVVDLLTKRFHNYVQLY
HHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEE
PTRGAAAELHNHDFMDMIYRGWKLIDKARRVKNGSDAPITPKIGNFKVDLDPIFKNEVIM
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHCCCEEE
NPQRYAYPACAITVRFSALMRLADYPCLLTSEPVTATMMTNIIALHKETPGAPARVCKDC
CCHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
ATACLVDFRHQYCQYREAV
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEEIYSKMVNEAMAAQWADVNIIKEKRGHEFKIKHAKGYVDVANKMEAVGKQDPSVIKLH
CHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEE
KDSINAHFDILSELTKTVRPEDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIQTIEKSE
CCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ALIGKEVLRRYGGFYGPTCVVDFALIPGSTSNIVNRILKNVDIPIAHKQAILASKSWGMN
HHHHHHHHHHHCCCCCCHHHEEEHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
TSYGFGEKFTNAIEAGKSLNEAIKEEIEMIKFIYDKPIDAQAKLMDDFGHESFDVRKYMG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHH
EYKKKMEPAVAAAMESEVHYGNIVTIPAYCVGDIAHHVAQSTFNMCKDDVVMGVIEAVST
HHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMDNTLRSNVKNFKNEYEVLSLATGSTAAATECILELDGFNAPTVVDLLTKRFHNYVQLY
HHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEE
PTRGAAAELHNHDFMDMIYRGWKLIDKARRVKNGSDAPITPKIGNFKVDLDPIFKNEVIM
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHCCCEEE
NPQRYAYPACAITVRFSALMRLADYPCLLTSEPVTATMMTNIIALHKETPGAPARVCKDC
CCHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
ATACLVDFRHQYCQYREAV
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA