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The map label for this gene is vhcB [H]

Identifier: 45358387

GI number: 45358387

Start: 818140

End: 819333

Strand: Direct

Name: vhcB [H]

Synonym: MMP0824

Alternate gene names: 45358387

Gene position: 818140-819333 (Clockwise)

Preceding gene: 45358386

Following gene: 45358388

Centisome position: 49.25

GC content: 36.68

Gene sequence:

>1194_bases
ATGATCAAGATAAACACTGAAGACTGTTATATGTGTAAAGCTTGTGAAAATAGCTGCCCTACAGAAGCTTTAAAATTAAA
TCCCTTTAAAGTATGCCAACTTTGTGGAAATTGTGTCAATGTATGTCCAAACGATGCCCTAAACTTAAGAGAAATCGAAT
TAAATGGTAAAACTATTAAACAGATTGCATATTTCCCTACAAAGTGCGATTTGTGCGGTGAATGTGTTAAAGTCTGTCCA
AATAACCTCAAAATAGAAAATGATAAATTAAAAGGTTTCTGCGTAGGCTGTATGAAATGTGTTGATGCATGTCCTGATTC
TTACGTTGGAATGGAAGGCGTAGTTGAACCTGCTAAAAGAAACATTACATTGCCAAAAGAACCTATTGCAGTTACTGAGG
ATTGTGTCGGCTGTGGCGTATGTATTTCTGAATGCCCTGTTGGTGCACTTTCAATAGAGGGCGAAAAAGCAGTAGTTGAC
AAAGATTCTTGTATATATTGCAGTATCTGTGCACAGACTTGCCCATGGAACGCTATATTTGTTGCAGGCAAAAAATCACC
AAAAAGGGATAAAAATATTGTCAAATTTAGTGTGGACAGCGATTTATGTATTGGATGCGGGGACTGTACTGACAAATGTC
CAAGGGATTTAATTGTTTTAAATGAAATGGTTGCAGTTCCACCAAAAGGATGCCCTGCATGTGGATTATGTAAAGCAGCA
TGTCCTGTTGATGCAATTGAATTAGTAGTTGAATATGCATCTCCAAAACCTATAACTGATGAAGGTATAGTTTGGGATGA
AGAAAAATGTGCATACTGCGGACCTTGTGCCATAAAATGTCCAAATAATGCGATAACTGTGGTAAATCCAAAAGGACTTG
AAATGCCAAGCAGGAAAAAAACTGAAAAAGCAAACGAGTTTAAAATGTGTATTCGATGTGGTGCATGTGTTCAAAGCTGT
CCAAACGATGCACTTAGGATTGGTAAAATCATCCACAATGGTAAGGAATACGAAAGAATCGAATTTAGTCCTAATTTATG
TGATTCCTGTGGAAAATGTATTGAAACGTGTCCTTATGACATGCTTAAATTAACGGGAAAATCAGAAAAGCCTCTCGAAG
GGTTCTGTGTAATGTGTTTGAAATGTATTGAAGCCTGTGATAAGGCTAAAAAGAGCGCATTATCTTTAAAATAA

Upstream 100 bases:

>100_bases
GCCTTTCATGTGCAACGCACACAATTGACGGAAAAGAAAGAATGCTTTCAATGGATGTCTACAAGGGCGGAAAATTAATT
AAAACATTATAGGGGATATC

Downstream 100 bases:

>100_bases
TTTTTAATAGATGTAGCTATTAGAAAACGTAATAATGGTATTAAAATATATATTTGGACTAACAGTTCAAGCCAGATATT
GGTGATAATTATGGAAGAAC

Product: coenzyme F420-non-reducing hydrogenase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MIKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNCVNVCPNDALNLREIELNGKTIKQIAYFPTKCDLCGECVKVCP
NNLKIENDKLKGFCVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKAVVD
KDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAA
CPVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSC
PNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLKLTGKSEKPLEGFCVMCLKCIEACDKAKKSALSLK

Sequences:

>Translated_397_residues
MIKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNCVNVCPNDALNLREIELNGKTIKQIAYFPTKCDLCGECVKVCP
NNLKIENDKLKGFCVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKAVVD
KDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAA
CPVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSC
PNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLKLTGKSEKPLEGFCVMCLKCIEACDKAKKSALSLK
>Mature_397_residues
MIKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNCVNVCPNDALNLREIELNGKTIKQIAYFPTKCDLCGECVKVCP
NNLKIENDKLKGFCVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKAVVD
KDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAA
CPVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSC
PNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLKLTGKSEKPLEGFCVMCLKCIEACDKAKKSALSLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 11 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 43065; Mature: 43065

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
14.4 %Cys+Met (Translated Protein)
12.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
14.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNCVNVCPNDALNLREIELNGKTIK
CEEECCCCCEEEHHHCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEE
QIAYFPTKCDLCGECVKVCPNNLKIENDKLKGFCVGCMKCVDACPDSYVGMEGVVEPAKR
HHHCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHCHHHC
NITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKAVVDKDSCIYCSICAQTCPWNAIF
CCCCCCCCCCCCHHHHHCCCCHHHCCCCEEEECCCEEEECCCCEEEEEEHHCCCCCCEEE
VAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAA
EECCCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHC
CPVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKK
CCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCHH
TEKANEFKMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHH
MLKLTGKSEKPLEGFCVMCLKCIEACDKAKKSALSLK
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNCVNVCPNDALNLREIELNGKTIK
CEEECCCCCEEEHHHCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEE
QIAYFPTKCDLCGECVKVCPNNLKIENDKLKGFCVGCMKCVDACPDSYVGMEGVVEPAKR
HHHCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHCHHHC
NITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKAVVDKDSCIYCSICAQTCPWNAIF
CCCCCCCCCCCCHHHHHCCCCHHHCCCCEEEECCCEEEECCCCEEEEEEHHCCCCCCEEE
VAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAA
EECCCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHC
CPVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKK
CCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCHH
TEKANEFKMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHH
MLKLTGKSEKPLEGFCVMCLKCIEACDKAKKSALSLK
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1603063 [H]