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The map label for this gene is opdE [H]

Identifier: 45358359

GI number: 45358359

Start: 788112

End: 789326

Strand: Direct

Name: opdE [H]

Synonym: MMP0796

Alternate gene names: 45358359

Gene position: 788112-789326 (Clockwise)

Preceding gene: 45358358

Following gene: 45358360

Centisome position: 47.44

GC content: 38.52

Gene sequence:

>1215_bases
ATGGAAGAAAATACAACTAATCAAATAATTAACGATAATAAATCAGCTTGGGGAGCTATCTGGGCAATGTCCCTTTGTGC
AATGGTTTTGGTTGCATCAGAATTTATGCCAGTAAGTCTTTTAACCCCCATAGCTACAGACTTACAAATTACTGAAGGAA
CTGCTGGACAGTCCATTTCTATTTCTGGCGTATTTGCACTAATTACCAGTCTTTTTTTAACTCAAATAATTGGTAATAAA
GATAGAAGACATGTTTTACTTTTTTTCACCGCGTTAACTGGAATATCTGGTGTACTGGTGGCTTTTGCTCCTGATTCCAC
AATGTTAATGATTGGACGTGCACTTTTGGGGATGTGTATTGGCGGATTTTGGTCAATGTCTGCTGCAACAGTTATGCGTA
TTGTTTCAGCTTCATCTGTACCAAAAGCGCTTGCGATTCTTAACGGAGGAACTGCGTTATCAACTACGGTAGCTGCCCCA
ATGGGAAGTTTCCTTGGAGGTATTATTGGATGGAGAGGCGCATTTTTCATGATAGTTCCGCTTGCATTCATCGCATTTAT
CTGGCAGTACAAAAGTATTCCTAAACTTCCCAAAGAAAATTCAAATGAACAAAAAGAAAAATTTGGAAGCGTATTTGGAC
TATTAAAAAACTGGAAAGTTGCATTGGGCATGATTTCAGTCATGCTTTTTTTCATGGGACAATCTGCCCTATTTACGTAC
CTTCGCCCATTTCTTGAAATGGTAACAAAAGTAAATGTGGAAACCCTATCTCTTGTATTACTGTCTATGGGCATTTTTGG
ATTAATAGGAACGTTTATAATCGAGATCATGTTAAAAAAGCGCCTTTATAGCTTAATTATAATAATTCCCTTTTTAATGG
CGATAACTGCAGTATTGATGCTTTCCTTTGGAACTTCACTGGCAGCAGTATTTGTTTTGATTAGTATTTGGGGATTTCTT
GCAACTTCTGCCCCAGTTGCCTGGTGGACGTGGCTTAGCAGGATCCTTCCAACTCGAGCAGAAGCTGGAGGGGGTTTAAT
GGTTGCAATTATTCAGCTCGCCATTACTCTAGGTGCAGCCTTTGGCGGTGTTTTCTTTGATACAGCAGGTTACCAAAGTA
CATTCATGTTCAGCGCTTTAATTTTAGGCATTGCAACCATCATGGCATGCATAACAGGTTTTCATGTTTACAGGATTAAT
AAAAATAAAAATTAA

Upstream 100 bases:

>100_bases
AGAATTTACAAAAAAAGGCATTGCATTAGTGTCTTTTGTATTTCCAATTTAATGACATATATAAACTACACAGGTACTTA
AAAACGGATAGAAGAATATT

Downstream 100 bases:

>100_bases
TTGAAATAAACTTACATTATCAGAATTTAAAATTAAAAAATAATAATTGGATAAAAAAATGATAAAAAAATTGGACTTAA
ACGGAAGATTAACTGGCTTT

Product: sugar efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MEENTTNQIINDNKSAWGAIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIGNK
DRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSASSVPKALAILNGGTALSTTVAAP
MGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIPKLPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTY
LRPFLEMVTKVNVETLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTSLAAVFVLISIWGFL
ATSAPVAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGAAFGGVFFDTAGYQSTFMFSALILGIATIMACITGFHVYRIN
KNKN

Sequences:

>Translated_404_residues
MEENTTNQIINDNKSAWGAIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIGNK
DRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSASSVPKALAILNGGTALSTTVAAP
MGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIPKLPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTY
LRPFLEMVTKVNVETLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTSLAAVFVLISIWGFL
ATSAPVAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGAAFGGVFFDTAGYQSTFMFSALILGIATIMACITGFHVYRIN
KNKN
>Mature_404_residues
MEENTTNQIINDNKSAWGAIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIGNK
DRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSASSVPKALAILNGGTALSTTVAAP
MGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIPKLPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTY
LRPFLEMVTKVNVETLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTSLAAVFVLISIWGFL
ATSAPVAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGAAFGGVFFDTAGYQSTFMFSALILGIATIMACITGFHVYRIN
KNKN

Specific function: Regulates the expression of oprD which encodes the imipenem-specific porin [H]

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywfA [H]

Homologues:

Organism=Escherichia coli, GI145693198, Length=379, Percent_Identity=40.1055408970976, Blast_Score=277, Evalue=8e-76,
Organism=Escherichia coli, GI1787947, Length=289, Percent_Identity=27.3356401384083, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787808, Length=202, Percent_Identity=29.2079207920792, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786595, Length=338, Percent_Identity=24.5562130177515, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43610; Mature: 43610

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENTTNQIINDNKSAWGAIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSIS
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCEEE
ISGVFALITSLFLTQIIGNKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHH
GGFWSMSAATVMRIVSASSVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVP
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFIAFIWQYKSIPKLPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTY
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
LRPFLEMVTKVNVETLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFGTSLAAVFVLISIWGFLATSAPVAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGAA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
FGGVFFDTAGYQSTFMFSALILGIATIMACITGFHVYRINKNKN
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
>Mature Secondary Structure
MEENTTNQIINDNKSAWGAIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSIS
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCEEE
ISGVFALITSLFLTQIIGNKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHH
GGFWSMSAATVMRIVSASSVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVP
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFIAFIWQYKSIPKLPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTY
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
LRPFLEMVTKVNVETLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFGTSLAAVFVLISIWGFLATSAPVAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGAA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
FGGVFFDTAGYQSTFMFSALILGIATIMACITGFHVYRINKNKN
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1427017; 10984043 [H]