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The map label for this gene is yxeM [H]

Identifier: 45358333

GI number: 45358333

Start: 761693

End: 762445

Strand: Direct

Name: yxeM [H]

Synonym: MMP0770

Alternate gene names: 45358333

Gene position: 761693-762445 (Clockwise)

Preceding gene: 45358326

Following gene: 45358346

Centisome position: 45.85

GC content: 30.01

Gene sequence:

>753_bases
ATGTTTAATCCCAAATTTTTAATAATTTCAACGATATTTTTAATAGTTTTTTCAGGTTGTACTGAAGATAATACTGGGGC
CAACAATCAGGTTTTAACTGTTGGGGTTTGTACTGATCTAGCACCAACTTCATATATTGAAGATGGGGAATTTAAAGGCT
TTGAAGTAGAGTTAATATATGAAATTTCAAAAAGACTCGATTTACAACCTGAATTTGTAGTATATTCATTTTCAGAACTA
CTTGATGCAGTTTCCGAAGGCGAAGTTGATTGTGGAATAGGATATATTGGAAAAACACCGGAAAGACAGTTAAAAATGGA
TTTTTCAAGGCCCTATGGATATACTTATTCTACAATACTGGTCAGATCGGATAGTAATTGTGTTGGAATAAAATGCCTTG
AAAATAAATCAGTTGGTGTTTTGAAAGATTCAATAGAAGAATACTGGTTAGAATCGCTTTTAAAATCTATGGATTTTAAA
ATTATAATCTACGAAAACCAAAATGATATCAATAACGATTTGTTATCTGGTAAAATCGATTCGGAAGTGACTGATCATAT
TACTTCTCTTTATCTAATTCAGGACTATGATACTGAACTAAAAATTGTAGGGGATAAATTTGACATTATCTACGTTGCAA
TTGCAATTGATAATACTAATCCAGAATTAAAAAAATCTATTGACGTTGCACTTCTTGAAATGGAAAATGACGGAACACTA
GTTAAATTAAAAGAAAAATGGAATATTGATTAA

Upstream 100 bases:

>100_bases
TATTAATATATCTATCCAATTCATTTAGAAAATTAGATCTAATATTTAATATATATCAAAATCTTGATTAATTCAAAAAA
TCAGGCAATGGAGAAATAGA

Downstream 100 bases:

>100_bases
CTAAATATTCCCTTTCAAAGTTTCTTTTAAAAACACGATATTCTGCCCTATCTTTTTTGAAGTTCGTTTAACCTCGTTTT
GATAAGAAACAGAATGTATT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MFNPKFLIISTIFLIVFSGCTEDNTGANNQVLTVGVCTDLAPTSYIEDGEFKGFEVELIYEISKRLDLQPEFVVYSFSEL
LDAVSEGEVDCGIGYIGKTPERQLKMDFSRPYGYTYSTILVRSDSNCVGIKCLENKSVGVLKDSIEEYWLESLLKSMDFK
IIIYENQNDINNDLLSGKIDSEVTDHITSLYLIQDYDTELKIVGDKFDIIYVAIAIDNTNPELKKSIDVALLEMENDGTL
VKLKEKWNID

Sequences:

>Translated_250_residues
MFNPKFLIISTIFLIVFSGCTEDNTGANNQVLTVGVCTDLAPTSYIEDGEFKGFEVELIYEISKRLDLQPEFVVYSFSEL
LDAVSEGEVDCGIGYIGKTPERQLKMDFSRPYGYTYSTILVRSDSNCVGIKCLENKSVGVLKDSIEEYWLESLLKSMDFK
IIIYENQNDINNDLLSGKIDSEVTDHITSLYLIQDYDTELKIVGDKFDIIYVAIAIDNTNPELKKSIDVALLEMENDGTL
VKLKEKWNID
>Mature_250_residues
MFNPKFLIISTIFLIVFSGCTEDNTGANNQVLTVGVCTDLAPTSYIEDGEFKGFEVELIYEISKRLDLQPEFVVYSFSEL
LDAVSEGEVDCGIGYIGKTPERQLKMDFSRPYGYTYSTILVRSDSNCVGIKCLENKSVGVLKDSIEEYWLESLLKSMDFK
IIIYENQNDINNDLLSGKIDSEVTDHITSLYLIQDYDTELKIVGDKFDIIYVAIAIDNTNPELKKSIDVALLEMENDGTL
VKLKEKWNID

Specific function: Probably part of the ABC transporter complex yxeMNO that could be involved in amino-acid import. May transport S- methylcysteine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=220, Percent_Identity=30, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1788649, Length=248, Percent_Identity=24.5967741935484, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788648, Length=227, Percent_Identity=25.5506607929515, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787031, Length=226, Percent_Identity=25.6637168141593, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787088, Length=200, Percent_Identity=26.5, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28291; Mature: 28291

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNPKFLIISTIFLIVFSGCTEDNTGANNQVLTVGVCTDLAPTSYIEDGEFKGFEVELIY
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEE
EISKRLDLQPEFVVYSFSELLDAVSEGEVDCGIGYIGKTPERQLKMDFSRPYGYTYSTIL
EHHHHCCCCCCCEEEEHHHHHHHHHCCCCEECCCCCCCCCCHHEEEECCCCCCCEEEEEE
VRSDSNCVGIKCLENKSVGVLKDSIEEYWLESLLKSMDFKIIIYENQNDINNDLLSGKID
EECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHCCCCC
SEVTDHITSLYLIQDYDTELKIVGDKFDIIYVAIAIDNTNPELKKSIDVALLEMENDGTL
CHHHHHHEEEEEEEECCCEEEEECCCEEEEEEEEEEECCCHHHHHCEEEEEEEECCCCCE
VKLKEKWNID
EEEECCCCCC
>Mature Secondary Structure
MFNPKFLIISTIFLIVFSGCTEDNTGANNQVLTVGVCTDLAPTSYIEDGEFKGFEVELIY
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEE
EISKRLDLQPEFVVYSFSELLDAVSEGEVDCGIGYIGKTPERQLKMDFSRPYGYTYSTIL
EHHHHCCCCCCCEEEEHHHHHHHHHCCCCEECCCCCCCCCCHHEEEECCCCCCCEEEEEE
VRSDSNCVGIKCLENKSVGVLKDSIEEYWLESLLKSMDFKIIIYENQNDINNDLLSGKID
EECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHCCCCC
SEVTDHITSLYLIQDYDTELKIVGDKFDIIYVAIAIDNTNPELKKSIDVALLEMENDGTL
CHHHHHHEEEEEEEECCCEEEEECCCEEEEEEEEEEECCCHHHHHCEEEEEEEECCCCCE
VKLKEKWNID
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]