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The map label for this gene is rps3Ae [H]

Identifier: 45358232

GI number: 45358232

Start: 658446

End: 659123

Strand: Direct

Name: rps3Ae [H]

Synonym: MMP0669

Alternate gene names: 45358232

Gene position: 658446-659123 (Clockwise)

Preceding gene: 45358231

Following gene: 45358233

Centisome position: 39.64

GC content: 38.2

Gene sequence:

>678_bases
ATGGCAAGAATGAAAGCTAGGTCCGCTAAAGGAAAAAGAGTGGCCAAAGATACATGGAAATCCAAAGTATGGTATGATAT
TTACACACCACAATCATTCGGTGGAGACGTAATTGGACAAACTCCAGCAAACGACCCTGCAAACTTGATCGGCAGGATTT
CAGAAATCAGCTTAAGAGACTTGACAAACGAACATTCAAAACACATGACAAGAATGTACTTCAAAGTTGATGGCGTAAGT
GGAAACAACGCTACATCACAGTTTGTAGGTCACGACACAACAAGAGAATACTTAAAATCACAAGTTAGAAGAAGAAGAAG
CAAAATCAACGCAATTGTTGAAGTAAGGACAAAAGATGGTTTCAAAGTAAGAGTTAAAGCATTAGTTTTAACAGCTGTAA
GGGCAAGAGACCACCACAAAACAGAAATTAGAGTTAGAATGGAACAGATAATCAAAGAAATGGCAAAAGAAACTCCATTC
GCTGAATTCGTACACGCTATGTTAATGGGCGGATTAGGTTCAAAAATATACGGCGACTGTAAAAAAATGTTCCCATTAAA
AAGAGTAGAAATCTTCAAATCTGAAGTTATAGAATTTGGAAAAGCTGCTGAAGCACCTGTGGAAGAAGCTGCTGCTGAGG
AAGTAGTAGAAGAAGCTGCTGCTGAAACACAAGAATAA

Upstream 100 bases:

>100_bases
GGAATTAGCCCGTAAAATCAAAAGAATATACGGTGAACCTGTAAAACCACTTAGAGATTACACAGATTTAACCGACTATA
TGTTATAATGAGGTGTAACA

Downstream 100 bases:

>100_bases
TTCCTCTTTTTAATTTTTTAATTTTTAAGTAATCTTCTGTTTTTTAAAGTTTACCCTTATTTATCCATTATTGTCTGGTG
GAATTATGAACGACAGATCC

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MARMKARSAKGKRVAKDTWKSKVWYDIYTPQSFGGDVIGQTPANDPANLIGRISEISLRDLTNEHSKHMTRMYFKVDGVS
GNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKTEIRVRMEQIIKEMAKETPF
AEFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIEFGKAAEAPVEEAAAEEVVEEAAAETQE

Sequences:

>Translated_225_residues
MARMKARSAKGKRVAKDTWKSKVWYDIYTPQSFGGDVIGQTPANDPANLIGRISEISLRDLTNEHSKHMTRMYFKVDGVS
GNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKTEIRVRMEQIIKEMAKETPF
AEFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIEFGKAAEAPVEEAAAEEVVEEAAAETQE
>Mature_224_residues
ARMKARSAKGKRVAKDTWKSKVWYDIYTPQSFGGDVIGQTPANDPANLIGRISEISLRDLTNEHSKHMTRMYFKVDGVSG
NNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKTEIRVRMEQIIKEMAKETPFA
EFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIEFGKAAEAPVEEAAAEEVVEEAAAETQE

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family [H]

Homologues:

Organism=Homo sapiens, GI4506723, Length=219, Percent_Identity=27.8538812785388, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17553700, Length=200, Percent_Identity=28.5, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323474, Length=210, Percent_Identity=26.1904761904762, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323577, Length=198, Percent_Identity=25.7575757575758, Blast_Score=79, Evalue=6e-16,
Organism=Drosophila melanogaster, GI17864162, Length=200, Percent_Identity=28.5, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24638499, Length=159, Percent_Identity=28.3018867924528, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001593
- InterPro:   IPR018281 [H]

Pfam domain/function: PF01015 Ribosomal_S3Ae [H]

EC number: NA

Molecular weight: Translated: 25433; Mature: 25301

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMKARSAKGKRVAKDTWKSKVWYDIYTPQSFGGDVIGQTPANDPANLIGRISEISLRD
CCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LTNEHSKHMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDG
HHHHHHHHHHHHHEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCC
FKVRVKALVLTAVRARDHHKTEIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYGDC
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
KKMFPLKRVEIFKSEVIEFGKAAEAPVEEAAAEEVVEEAAAETQE
HHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARMKARSAKGKRVAKDTWKSKVWYDIYTPQSFGGDVIGQTPANDPANLIGRISEISLRD
CCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LTNEHSKHMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDG
HHHHHHHHHHHHHEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCC
FKVRVKALVLTAVRARDHHKTEIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYGDC
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
KKMFPLKRVEIFKSEVIEFGKAAEAPVEEAAAEEVVEEAAAETQE
HHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA