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The map label for this gene is yhbO [C]

Identifier: 45358122

GI number: 45358122

Start: 560693

End: 561211

Strand: Direct

Name: yhbO [C]

Synonym: MMP0559

Alternate gene names: 45358122

Gene position: 560693-561211 (Clockwise)

Preceding gene: 45358118

Following gene: 45358123

Centisome position: 33.75

GC content: 38.34

Gene sequence:

>519_bases
TTGGTGGCTATCGTAATGGTTATTGCACCGGAAAAATTTAGGGACGAAGAACTTTTTGAACCTTTACAGGTATTTCAAAG
TAAAAATATCGCAACACAGGTAGTTTCAACAACAACTGGACAGCACAAAGGCGTACTGGGCAGAGTAATGACTACGACAA
AAACAATTGAAGGAGTAAATCCAGATGATTTCGATGCGATAGTTATTGTTGGTGGGGGAGGCTCAAGAGATTACCTCTGG
AACAATGAAAAATTACTCGAACTTTTAAAAGAATTTAATTCCATGGGAAAAATTACTGCCGCAATTTGTATTTCACCAGC
AGTTCTTGCACAGGCAGGACTATTAACTGGTAAAAAAGCAACAGTATTCCCTGATGACGAAGCTATTGCAGTTTTACAGC
AAAAGGGAGCAATTTATCTTGATGAAGCTGTAATTTTGGATGGAACCGTAATTACTGGACGAAATCCCGACGCAGCAAAA
GAATTTGGATTAAAAATTGCAGAAGCGCTTGGAAAATAA

Upstream 100 bases:

>100_bases
TTAAGAATTGTTATGTTTAATCGTAGACTGAATTTACATTATTTACGTTTTTATAAATTAAGGTATATATGTTTAGATAT
TGAAGTGAAAAGGAGGGATT

Downstream 100 bases:

>100_bases
GTATTTCTCTTTTTAATTTTTAAATTTAGATTAATAATTAATTATAATTTACGTGAATGACATGGATTTTAAAAAAATAA
AGTATCAAAAAATAGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MVAIVMVIAPEKFRDEELFEPLQVFQSKNIATQVVSTTTGQHKGVLGRVMTTTKTIEGVNPDDFDAIVIVGGGGSRDYLW
NNEKLLELLKEFNSMGKITAAICISPAVLAQAGLLTGKKATVFPDDEAIAVLQQKGAIYLDEAVILDGTVITGRNPDAAK
EFGLKIAEALGK

Sequences:

>Translated_172_residues
MVAIVMVIAPEKFRDEELFEPLQVFQSKNIATQVVSTTTGQHKGVLGRVMTTTKTIEGVNPDDFDAIVIVGGGGSRDYLW
NNEKLLELLKEFNSMGKITAAICISPAVLAQAGLLTGKKATVFPDDEAIAVLQQKGAIYLDEAVILDGTVITGRNPDAAK
EFGLKIAEALGK
>Mature_172_residues
MVAIVMVIAPEKFRDEELFEPLQVFQSKNIATQVVSTTTGQHKGVLGRVMTTTKTIEGVNPDDFDAIVIVGGGGSRDYLW
NNEKLLELLKEFNSMGKITAAICISPAVLAQAGLLTGKKATVFPDDEAIAVLQQKGAIYLDEAVILDGTVITGRNPDAAK
EFGLKIAEALGK

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=174, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28571932, Length=113, Percent_Identity=38.9380530973451, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24653499, Length=114, Percent_Identity=35.0877192982456, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 18405; Mature: 18405

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAIVMVIAPEKFRDEELFEPLQVFQSKNIATQVVSTTTGQHKGVLGRVMTTTKTIEGVN
CEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
PDDFDAIVIVGGGGSRDYLWNNEKLLELLKEFNSMGKITAAICISPAVLAQAGLLTGKKA
CCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHCCCCCCE
TVFPDDEAIAVLQQKGAIYLDEAVILDGTVITGRNPDAAKEFGLKIAEALGK
EECCCCHHHHEEHHCCCEEECCEEEECCEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVAIVMVIAPEKFRDEELFEPLQVFQSKNIATQVVSTTTGQHKGVLGRVMTTTKTIEGVN
CEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
PDDFDAIVIVGGGGSRDYLWNNEKLLELLKEFNSMGKITAAICISPAVLAQAGLLTGKKA
CCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHCCCCCCE
TVFPDDEAIAVLQQKGAIYLDEAVILDGTVITGRNPDAAKEFGLKIAEALGK
EECCCCHHHHEEHHCCCEEECCEEEECCEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]