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The map label for this gene is ybiF [C]

Identifier: 45358115

GI number: 45358115

Start: 555729

End: 556619

Strand: Direct

Name: ybiF [C]

Synonym: MMP0552

Alternate gene names: 45358115

Gene position: 555729-556619 (Clockwise)

Preceding gene: 45358114

Following gene: 45358117

Centisome position: 33.45

GC content: 28.96

Gene sequence:

>891_bases
ATGAACAAAGTAAAAGGAACTGCATATACAATTTATTCCTCCGTTGCATTTGGTATAATGCCTTTTTTAACTAAATTTGC
ATATGACGGCGGAGCAAATGCAGTTACTACACTAATGTTTCGTTTTTTGATTGCAGGATTAATTTTATACGTATTTTTAA
AATTTAAAAAAATAAGTTTAAAAATTTCAAGGCACAATTTTGTAGAAATTTTATTTTATGGTGCATTTTTGTACGCTTTA
AACACGGTATTCCTTTATGAGGCTTATAATTATATACCGACAGGCATTGCAACTACACTTCACTTTATATACCCTGTAAC
GGTTACATTATTAATGATAAGTATTTTTAAAGAAAATTTAGGGATTAATAAGGTTTTGGCACTTATTTTTTCATTTTTAG
GAATGTACTGTCTTTTGGGCGGAAACTGTGCAGGTTTTGATATTTATGGAGTGTTACTTGCAGCAGGATCAGGTTTAGTT
TATGCAGGATACATTGTTTCTGCTGGAAAATGCAAATATTCAAAAATAGACTCTTATGTAACTATATTTTATTTATCGAT
TCTTTCTTCAGTTTTACTTTTTATTTACGGCCTATTTACAAATACTCTAACATTAAATATGGCATTTTCAAGTTATGCAT
CGATTGGACTTATTTCGATATTTTGCACGGTTTTAGCATTGATTGCATTTTTAGAAGGAATAAAATTGATAGGTCCGTCA
AATACTGCGATATTGAGCACACTAGAACCAATTGTAAGTATAATTCTTGGTATACTGTTATTAAATGAAGTATTGAGCTT
TAAAATTGGTTTGGGAAGTGTTTTAGTTTTAATTTCGGTAATAATTGTTACAATCGAAAAAAGTAAAGTTTCTGATACAG
TTAAAAATTAA

Upstream 100 bases:

>100_bases
TAAATGGTGCATTTGAAAGATAATTTTTATCTAACTTAGCAATATTTATATACATAAAGCGATTTATCAATAGTTCCTAA
AGATATTCGCGAGTTATACA

Downstream 100 bases:

>100_bases
AAAATAAAAAGTAAACTTAAATTAATGTTCAAAAATGTATTTTAATACTGCTTTTTGAGCGTGAAGCCTGTTTTCAGCCT
GATCAAATACTTTTGATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNKVKGTAYTIYSSVAFGIMPFLTKFAYDGGANAVTTLMFRFLIAGLILYVFLKFKKISLKISRHNFVEILFYGAFLYAL
NTVFLYEAYNYIPTGIATTLHFIYPVTVTLLMISIFKENLGINKVLALIFSFLGMYCLLGGNCAGFDIYGVLLAAGSGLV
YAGYIVSAGKCKYSKIDSYVTIFYLSILSSVLLFIYGLFTNTLTLNMAFSSYASIGLISIFCTVLALIAFLEGIKLIGPS
NTAILSTLEPIVSIILGILLLNEVLSFKIGLGSVLVLISVIIVTIEKSKVSDTVKN

Sequences:

>Translated_296_residues
MNKVKGTAYTIYSSVAFGIMPFLTKFAYDGGANAVTTLMFRFLIAGLILYVFLKFKKISLKISRHNFVEILFYGAFLYAL
NTVFLYEAYNYIPTGIATTLHFIYPVTVTLLMISIFKENLGINKVLALIFSFLGMYCLLGGNCAGFDIYGVLLAAGSGLV
YAGYIVSAGKCKYSKIDSYVTIFYLSILSSVLLFIYGLFTNTLTLNMAFSSYASIGLISIFCTVLALIAFLEGIKLIGPS
NTAILSTLEPIVSIILGILLLNEVLSFKIGLGSVLVLISVIIVTIEKSKVSDTVKN
>Mature_296_residues
MNKVKGTAYTIYSSVAFGIMPFLTKFAYDGGANAVTTLMFRFLIAGLILYVFLKFKKISLKISRHNFVEILFYGAFLYAL
NTVFLYEAYNYIPTGIATTLHFIYPVTVTLLMISIFKENLGINKVLALIFSFLGMYCLLGGNCAGFDIYGVLLAAGSGLV
YAGYIVSAGKCKYSKIDSYVTIFYLSILSSVLLFIYGLFTNTLTLNMAFSSYASIGLISIFCTVLALIAFLEGIKLIGPS
NTAILSTLEPIVSIILGILLLNEVLSFKIGLGSVLVLISVIIVTIEKSKVSDTVKN

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787033, Length=243, Percent_Identity=30.0411522633745, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32309; Mature: 32309

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVKGTAYTIYSSVAFGIMPFLTKFAYDGGANAVTTLMFRFLIAGLILYVFLKFKKISL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
KISRHNFVEILFYGAFLYALNTVFLYEAYNYIPTGIATTLHFIYPVTVTLLMISIFKENL
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GINKVLALIFSFLGMYCLLGGNCAGFDIYGVLLAAGSGLVYAGYIVSAGKCKYSKIDSYV
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHHEEECCCCCHHHHHHHH
TIFYLSILSSVLLFIYGLFTNTLTLNMAFSSYASIGLISIFCTVLALIAFLEGIKLIGPS
HHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
NTAILSTLEPIVSIILGILLLNEVLSFKIGLGSVLVLISVIIVTIEKSKVSDTVKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKVKGTAYTIYSSVAFGIMPFLTKFAYDGGANAVTTLMFRFLIAGLILYVFLKFKKISL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
KISRHNFVEILFYGAFLYALNTVFLYEAYNYIPTGIATTLHFIYPVTVTLLMISIFKENL
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GINKVLALIFSFLGMYCLLGGNCAGFDIYGVLLAAGSGLVYAGYIVSAGKCKYSKIDSYV
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHHEEECCCCCHHHHHHHH
TIFYLSILSSVLLFIYGLFTNTLTLNMAFSSYASIGLISIFCTVLALIAFLEGIKLIGPS
HHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
NTAILSTLEPIVSIILGILLLNEVLSFKIGLGSVLVLISVIIVTIEKSKVSDTVKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA