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The map label for this gene is yecS [H]

Identifier: 45358114

GI number: 45358114

Start: 554992

End: 555651

Strand: Direct

Name: yecS [H]

Synonym: MMP0551

Alternate gene names: 45358114

Gene position: 554992-555651 (Clockwise)

Preceding gene: 45358113

Following gene: 45358115

Centisome position: 33.41

GC content: 34.7

Gene sequence:

>660_bases
ATGAAATTTTACATTGTTTTTGACAATATCCCTTTCATTATCGATGCAGTTTTTGTTACTCTCAAAATAACGATAATGTC
TTTTTTGCTGGCGGTTATTATCGCAGTTTTAGTTGGTTCTACACGAGCAATGAATTTTTCAAAAACTTTAGATCTGGTTT
TAATGGCTTATGTAGAAGTTTTTAGGGGAACTCCTCTTTTAATCCAGCTGTTTTTTATATATTATGGCTTGCCGTCGATT
GGAATTACAATGTCAAGCACTTTTGCAGCAGTTTTAGGACTCTCTTTAAATGGTGGGGCATATATTTCCGAGATAATACG
GGCCGCAATACAGTCAGTTCCAGTAGGCCAGTTTGAGGCTGCAGAATCACTTGGAATGGGTAAAATTGAAAGTATGGTTT
ATATTGTGCTTCCACAAGCTTTCAGGATAACTATCCCGCCTCTTGTAAATTCATTTTCGTCAATTTTAAAAGAAAGTTCA
TTAATATCCGTTCTTGCAATTACTGAACTTACAAGGATAGGACAGCTAATTTACACAAGAACGTCGAGACCTTTTGAGAT
ATACTTGACAATAGGACTTATTTATTTAATATTGGTGTCAATAATCTCGATAGGCTCGTGGAAAATTGAAAAAAAGCTAA
ATGGTGCATTTGAAAGATAA

Upstream 100 bases:

>100_bases
CTTTCAAAAATAAAAGAAAATGGAAAGTACGATGAAATCCAAGACAAATGGTTGAGTTTAGAATAATTTTCTAAACTTTT
AAACTAATTTTGGTGTTTTT

Downstream 100 bases:

>100_bases
TTTTTATCTAACTTAGCAATATTTATATACATAAAGCGATTTATCAATAGTTCCTAAAGATATTCGCGAGTTATACAATG
AACAAAGTAAAAGGAACTGC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKFYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGTPLLIQLFFIYYGLPSI
GITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESS
LISVLAITELTRIGQLIYTRTSRPFEIYLTIGLIYLILVSIISIGSWKIEKKLNGAFER

Sequences:

>Translated_219_residues
MKFYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGTPLLIQLFFIYYGLPSI
GITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESS
LISVLAITELTRIGQLIYTRTSRPFEIYLTIGLIYLILVSIISIGSWKIEKKLNGAFER
>Mature_219_residues
MKFYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGTPLLIQLFFIYYGLPSI
GITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESS
LISVLAITELTRIGQLIYTRTSRPFEIYLTIGLIYLILVSIISIGSWKIEKKLNGAFER

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=212, Percent_Identity=40.0943396226415, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1787030, Length=211, Percent_Identity=33.175355450237, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786873, Length=198, Percent_Identity=31.8181818181818, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1787086, Length=224, Percent_Identity=29.4642857142857, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1788646, Length=200, Percent_Identity=30, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1787087, Length=197, Percent_Identity=29.4416243654822, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788645, Length=193, Percent_Identity=30.0518134715026, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI48994930, Length=203, Percent_Identity=33.4975369458128, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87082239, Length=167, Percent_Identity=32.9341317365269, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786874, Length=215, Percent_Identity=25.5813953488372, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24181; Mature: 24181

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEV
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FRGTPLLIQLFFIYYGLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEA
HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHH
AESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTR
HHHCCCCHHHHEEEEEECCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSRPFEIYLTIGLIYLILVSIISIGSWKIEKKLNGAFER
CCCCEEEHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCC
>Mature Secondary Structure
MKFYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEV
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FRGTPLLIQLFFIYYGLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEA
HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHH
AESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTR
HHHCCCCHHHHEEEEEECCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSRPFEIYLTIGLIYLILVSIISIGSWKIEKKLNGAFER
CCCCEEEHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]