| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
Click here to switch to the map view.
The map label for this gene is 45358095
Identifier: 45358095
GI number: 45358095
Start: 536793
End: 538262
Strand: Direct
Name: 45358095
Synonym: MMP0532
Alternate gene names: NA
Gene position: 536793-538262 (Clockwise)
Preceding gene: 45358094
Following gene: 45358096
Centisome position: 32.31
GC content: 30.75
Gene sequence:
>1470_bases ATGGGATTATGGAGTAAAATAAAGGATACTTCATTAAATATTGCAACTGTTGGATTATATGGGCTTGGTAAAAAAATTGG AAATGCGGCAAATACTGCTGAGGAAGCCGCTGCAGAAGCTGCAATAGCACTTGCATCAATTGGGATTACTGTTCAGGAAG TTGGTGAACAGTTAGAATCACTGCTTCACGAAACAGAAAAGTTAATTGTCATAAAAAGACTGATTCCAAGAGAAACCGAC GATTTATGGGATGAAGAAAAAGAACGGCTCGAAGAACTTCGGGCAGAACTTTTAGAAATAGAAGAAAAAATGCAAAATTT GGGCGTTGATTCTTCAGACTATAATTTTGGTTCTAATTTTTATGATTTCTTTAATTTTGATCGAATTCATGAAATAATGG ATCTTGTATTGCGACGATATCGGCTGAAAAAAGAAATTTATGAAATATTATATACGGAACCCGGAATTATTTCTGAAAGT ATATATAACATAAACGAAAGCATAGAACGATTTAACACATTAGAACAGCCCAGAATCGAAAATATAATGGATTCTGTTGA CGAAAATCTTTTAAAAACTGAAGAATTACTCGAAGAAATAAAAAAATTGTTTGTAGTAAATAAAAAAGAAGAAGAACTTA AGTTAAAACTTCCATGGTATAATTACAAAATAGAAAAGCTAAAAAGTGATAAAGAATACTTTTCAGAACGTTTTGGAAAA AAAGAATTACAGATTCAAAAATTTGAGGAACGGTTAAAACCAAACTTCGAAATCGATATTGAAGTTGTAAATCCACCCGA TGTAATTTTAAAGACAGATACACAAAAAGAAGATTTAATCAACTTAAATGAAAAAGCTATTGAAAAAACTGAGACATTGA AAAATATTAACGTTCAAAAGACTTCAAAAACTAATGTGATGGTACAAAATGTTCCAAAAGTTATTTCAGCTTCAACTTAC GAAAATGTTGTAAATCTTGGAAAGAAATTTTCATGTGATTCAAACTCATTTAAAACAAATTCCGACGCTTCAAGAGTAAA ATCTTGTATAAGATCAAAAGAAGAAACAATTCAAAGGGCCAAAAATCTCTTAAAATCACAAAAAGATTATTTTGAGCGAG AAATGTATAGATTGGATAGAATCGTTGAATTAAATAATATAAAAACTGAAAATGAACCCGGAGTAATTCCAAAAACCCTT GATGAAGTTTATGAAATATTAAAGGGTGTTCGGGAAGAAGAACAGCCAAGAATAGATAAACTCCTCGATTCACTAAATGA TACGCTTGACGAAACGAAATCAACAATTTCTGAAGTAAAAACTACAATTGAACCCATTCGGGGAATTATTGATAGTTTTT CAGGCCTTGAAAAACCATTAAAAATTGGATTAATACTTTTTGGGGCACTTTTAGTGTTGGATCTTCTTGCAGCATTTATA GTTTTGGTAAAAATCGCAATATGGGGTTAA
Upstream 100 bases:
>100_bases TTTTATATTCTTTTTTACAAATATATTTGTTGTTTATATACCAATTAATTATTTTAAACATTTAATATTATATCGGATTT AATCTGTTTTGGTGGTTTAA
Downstream 100 bases:
>100_bases GTTAGATTTATTTTAAGTTAATCTTCCTAAAATTCTCTTTTTTCCTTTAAATCGGGATAATTTAGCTAAATTTACTTTTT TATACCCATTATGATATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MGLWSKIKDTSLNIATVGLYGLGKKIGNAANTAEEAAAEAAIALASIGITVQEVGEQLESLLHETEKLIVIKRLIPRETD DLWDEEKERLEELRAELLEIEEKMQNLGVDSSDYNFGSNFYDFFNFDRIHEIMDLVLRRYRLKKEIYEILYTEPGIISES IYNINESIERFNTLEQPRIENIMDSVDENLLKTEELLEEIKKLFVVNKKEEELKLKLPWYNYKIEKLKSDKEYFSERFGK KELQIQKFEERLKPNFEIDIEVVNPPDVILKTDTQKEDLINLNEKAIEKTETLKNINVQKTSKTNVMVQNVPKVISASTY ENVVNLGKKFSCDSNSFKTNSDASRVKSCIRSKEETIQRAKNLLKSQKDYFEREMYRLDRIVELNNIKTENEPGVIPKTL DEVYEILKGVREEEQPRIDKLLDSLNDTLDETKSTISEVKTTIEPIRGIIDSFSGLEKPLKIGLILFGALLVLDLLAAFI VLVKIAIWG
Sequences:
>Translated_489_residues MGLWSKIKDTSLNIATVGLYGLGKKIGNAANTAEEAAAEAAIALASIGITVQEVGEQLESLLHETEKLIVIKRLIPRETD DLWDEEKERLEELRAELLEIEEKMQNLGVDSSDYNFGSNFYDFFNFDRIHEIMDLVLRRYRLKKEIYEILYTEPGIISES IYNINESIERFNTLEQPRIENIMDSVDENLLKTEELLEEIKKLFVVNKKEEELKLKLPWYNYKIEKLKSDKEYFSERFGK KELQIQKFEERLKPNFEIDIEVVNPPDVILKTDTQKEDLINLNEKAIEKTETLKNINVQKTSKTNVMVQNVPKVISASTY ENVVNLGKKFSCDSNSFKTNSDASRVKSCIRSKEETIQRAKNLLKSQKDYFEREMYRLDRIVELNNIKTENEPGVIPKTL DEVYEILKGVREEEQPRIDKLLDSLNDTLDETKSTISEVKTTIEPIRGIIDSFSGLEKPLKIGLILFGALLVLDLLAAFI VLVKIAIWG >Mature_488_residues GLWSKIKDTSLNIATVGLYGLGKKIGNAANTAEEAAAEAAIALASIGITVQEVGEQLESLLHETEKLIVIKRLIPRETDD LWDEEKERLEELRAELLEIEEKMQNLGVDSSDYNFGSNFYDFFNFDRIHEIMDLVLRRYRLKKEIYEILYTEPGIISESI YNINESIERFNTLEQPRIENIMDSVDENLLKTEELLEEIKKLFVVNKKEEELKLKLPWYNYKIEKLKSDKEYFSERFGKK ELQIQKFEERLKPNFEIDIEVVNPPDVILKTDTQKEDLINLNEKAIEKTETLKNINVQKTSKTNVMVQNVPKVISASTYE NVVNLGKKFSCDSNSFKTNSDASRVKSCIRSKEETIQRAKNLLKSQKDYFEREMYRLDRIVELNNIKTENEPGVIPKTLD EVYEILKGVREEEQPRIDKLLDSLNDTLDETKSTISEVKTTIEPIRGIIDSFSGLEKPLKIGLILFGALLVLDLLAAFIV LVKIAIWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56430; Mature: 56299
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLWSKIKDTSLNIATVGLYGLGKKIGNAANTAEEAAAEAAIALASIGITVQEVGEQLES CCCCHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LLHETEKLIVIKRLIPRETDDLWDEEKERLEELRAELLEIEEKMQNLGVDSSDYNFGSNF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH YDFFNFDRIHEIMDLVLRRYRLKKEIYEILYTEPGIISESIYNINESIERFNTLEQPRIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHH NIMDSVDENLLKTEELLEEIKKLFVVNKKEEELKLKLPWYNYKIEKLKSDKEYFSERFGK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCHHHHHHHHHCC KELQIQKFEERLKPNFEIDIEVVNPPDVILKTDTQKEDLINLNEKAIEKTETLKNINVQK HHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCC TSKTNVMVQNVPKVISASTYENVVNLGKKFSCDSNSFKTNSDASRVKSCIRSKEETIQRA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KNLLKSQKDYFEREMYRLDRIVELNNIKTENEPGVIPKTLDEVYEILKGVREEEQPRIDK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH LLDSLNDTLDETKSTISEVKTTIEPIRGIIDSFSGLEKPLKIGLILFGALLVLDLLAAFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVKIAIWG HHHHHHHCC >Mature Secondary Structure GLWSKIKDTSLNIATVGLYGLGKKIGNAANTAEEAAAEAAIALASIGITVQEVGEQLES CCCHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LLHETEKLIVIKRLIPRETDDLWDEEKERLEELRAELLEIEEKMQNLGVDSSDYNFGSNF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH YDFFNFDRIHEIMDLVLRRYRLKKEIYEILYTEPGIISESIYNINESIERFNTLEQPRIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHH NIMDSVDENLLKTEELLEEIKKLFVVNKKEEELKLKLPWYNYKIEKLKSDKEYFSERFGK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCHHHHHHHHHCC KELQIQKFEERLKPNFEIDIEVVNPPDVILKTDTQKEDLINLNEKAIEKTETLKNINVQK HHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCC TSKTNVMVQNVPKVISASTYENVVNLGKKFSCDSNSFKTNSDASRVKSCIRSKEETIQRA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KNLLKSQKDYFEREMYRLDRIVELNNIKTENEPGVIPKTLDEVYEILKGVREEEQPRIDK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH LLDSLNDTLDETKSTISEVKTTIEPIRGIIDSFSGLEKPLKIGLILFGALLVLDLLAAFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVKIAIWG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA