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The map label for this gene is rnp3

Identifier: 45357993

GI number: 45357993

Start: 430969

End: 431667

Strand: Direct

Name: rnp3

Synonym: MMP0430

Alternate gene names: 45357993

Gene position: 430969-431667 (Clockwise)

Preceding gene: 45357992

Following gene: 45357995

Centisome position: 25.94

GC content: 31.33

Gene sequence:

>699_bases
ATGCTTGAAGGAATTTTTGATATAAATCATGTTTTTGATGAAGAAGGGATAAAAACGTTAAAACGATTTGGATGGGACGG
TAGCGTTGCAGTTCAAAATCATAATGAATATTCTGAAGAAAAAATCAATACTGCAGTTGAATACGGAGAAAATTGCGAAT
TTAAAGTGTATTCTGGAGTAAAAATTTCAACAAAAAATCAAAATGAAATGGAAAAGGCAGTTAAAAAATATAGAAACAAA
GTTGATATTTTACTTGTCGAAGGCGGGGACGTTAAAATAAATCGGAGAGTCCTTGAAATGAACGATGTTGATATTTTATC
AACTCCTGAATTAAATAGAATGGATAATGGGCTTGATCACATCCTTGCAAGACTCGGTAGTACAAATCGAGTTGCAGTTG
AATTAAATTTTGGAAATCTTTTAAAAAGCAAAAATTATGATAGATCAAAAATTCTTTGGGCATTTCAAAGGAACTTAAAG
CTTTCTAAAAAATACGACACTCCAGTTGTAATTTCGAGCGGTGCAAACGATATTTATGGAATAAAGGCTCCCGGAGACTT
ACGGGGATTTTTAAATACTGTTGCTGATCCATTATATTCTAAAAAAATAATTGAGACAACGTCAAAAATCATTGATTACA
GGCTTTATTTGAAAAATAAAAATGTTTTAATGCCTGGACTCGAAATTGTCGAAGAATAA

Upstream 100 bases:

>100_bases
TAAAAAGATCATCGACGAAGTAAAAACTCCACAAGATAGATACTAAGTTCTTTTTTAATTTTTTTATTTTATTACATCCA
ATTTAATTTCAGGGGATTTA

Downstream 100 bases:

>100_bases
TCTTTTTTTCTGATTTTTAAATTGAATCTGCTTTGCTTTTAAAAATTTAAAAAATAGTATTGTTATTTTAAAAATTCAGT
TAACTTTATTTTATCCCCTA

Product: ribonuclease P

Products: NA

Alternate protein names: RNase P component 3

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MLEGIFDINHVFDEEGIKTLKRFGWDGSVAVQNHNEYSEEKINTAVEYGENCEFKVYSGVKISTKNQNEMEKAVKKYRNK
VDILLVEGGDVKINRRVLEMNDVDILSTPELNRMDNGLDHILARLGSTNRVAVELNFGNLLKSKNYDRSKILWAFQRNLK
LSKKYDTPVVISSGANDIYGIKAPGDLRGFLNTVADPLYSKKIIETTSKIIDYRLYLKNKNVLMPGLEIVEE

Sequences:

>Translated_232_residues
MLEGIFDINHVFDEEGIKTLKRFGWDGSVAVQNHNEYSEEKINTAVEYGENCEFKVYSGVKISTKNQNEMEKAVKKYRNK
VDILLVEGGDVKINRRVLEMNDVDILSTPELNRMDNGLDHILARLGSTNRVAVELNFGNLLKSKNYDRSKILWAFQRNLK
LSKKYDTPVVISSGANDIYGIKAPGDLRGFLNTVADPLYSKKIIETTSKIIDYRLYLKNKNVLMPGLEIVEE
>Mature_232_residues
MLEGIFDINHVFDEEGIKTLKRFGWDGSVAVQNHNEYSEEKINTAVEYGENCEFKVYSGVKISTKNQNEMEKAVKKYRNK
VDILLVEGGDVKINRRVLEMNDVDILSTPELNRMDNGLDHILARLGSTNRVAVELNFGNLLKSKNYDRSKILWAFQRNLK
LSKKYDTPVVISSGANDIYGIKAPGDLRGFLNTVADPLYSKKIIETTSKIIDYRLYLKNKNVLMPGLEIVEE

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG1603

COG function: function code J; RNase P/RNase MRP subunit p30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 3 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP3_METMP (P60781)

Other databases:

- EMBL:   BX950229
- RefSeq:   NP_987550.1
- ProteinModelPortal:   P60781
- SMR:   P60781
- GeneID:   2762077
- GenomeReviews:   BX950229_GR
- KEGG:   mmp:MMP0430
- NMPDR:   fig|267377.1.peg.430
- HOGENOM:   HBG541018
- OMA:   IYGIKAP
- ProtClustDB:   CLSK876467
- BioCyc:   MMAR267377:MMP0430-MONOMER
- BRENDA:   3.1.26.5
- HAMAP:   MF_00756
- InterPro:   IPR016195
- InterPro:   IPR002738

Pfam domain/function: PF01876 RNase_P_p30; SSF89550 PHP-like

EC number: =3.1.26.5

Molecular weight: Translated: 26453; Mature: 26453

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEGIFDINHVFDEEGIKTLKRFGWDGSVAVQNHNEYSEEKINTAVEYGENCEFKVYSGV
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCE
KISTKNQNEMEKAVKKYRNKVDILLVEGGDVKINRRVLEMNDVDILSTPELNRMDNGLDH
EEECCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEECCCEEECCCCCHHHCCCHHH
ILARLGSTNRVAVELNFGNLLKSKNYDRSKILWAFQRNLKLSKKYDTPVVISSGANDIYG
HHHHCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHCCEECCCCCCCEEEECCCCCEEE
IKAPGDLRGFLNTVADPLYSKKIIETTSKIIDYRLYLKNKNVLMPGLEIVEE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCHHHHCC
>Mature Secondary Structure
MLEGIFDINHVFDEEGIKTLKRFGWDGSVAVQNHNEYSEEKINTAVEYGENCEFKVYSGV
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCE
KISTKNQNEMEKAVKKYRNKVDILLVEGGDVKINRRVLEMNDVDILSTPELNRMDNGLDH
EEECCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEECCCEEECCCCCHHHCCCHHH
ILARLGSTNRVAVELNFGNLLKSKNYDRSKILWAFQRNLKLSKKYDTPVVISSGANDIYG
HHHHCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHCCEECCCCCCCEEEECCCCCEEE
IKAPGDLRGFLNTVADPLYSKKIIETTSKIIDYRLYLKNKNVLMPGLEIVEE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA