| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
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The map label for this gene is 45357982
Identifier: 45357982
GI number: 45357982
Start: 420466
End: 421977
Strand: Direct
Name: 45357982
Synonym: MMP0419
Alternate gene names: NA
Gene position: 420466-421977 (Clockwise)
Preceding gene: 45357981
Following gene: 45357983
Centisome position: 25.31
GC content: 36.64
Gene sequence:
>1512_bases ATGGCAAGAGAACAGTGGGCCTCTAAAATGGGTTTCATTTTAGCGGCAGTTGGTTCTGCAGTTGGTCTTGGAAATATATG GCGTTTTCCATATATGGCATATGAAAATGGTGGTGGAGCGTTTTTAATTCCTTATTTTGTTGCTTTATTGTTTGTTGGTA TAATGGTAATGGTTTTAGAGCTTGCTTTGGGGCATTCAACAAAAGGTTCAGCACCTCTGGCATTGAGAAGGCTTGGAAAG AACTTTGAATGGATAGGCTGGCTTGCAATAGCTACTGCATTTATAATTACGACGTACTATACTGCAATTATTGCATGGGC ATTAGTATACCTTGTTAAATTATTTATGGTCGGATTCCCAACTGATTTCGGCGGATTTTTCTTTAGTGATATTTTAGCAC TTTCTTCAGGTCACGGGGATCTTGGAGGATTTAACTTGCCAATATTGGTAGGATTGGCTTTGATATGGGGTGTAAATTAC ATTGTTGTAAATTCAGGAGTTAGAAAAGGTCTTGAAAAAGCAAATGAAATTTTAATGCCTGTATTATTTTTCCTGATTCT CGCACTCGTTGTAAGGAGCATTACCTTACCTGGCGGTCTTATGGGTATTGAATATTATTTAACGCCTAATTTTGCGGTGT TATTAACACCTAAAGTTTGGATTGATGCATTTTCCCAGATATTCTTTACATTGAGTCTTGGATTTGGTATCATGGTAGCA TATTCAAGCTACTTACCTAAAAAATCAGATTTAACTGCAAGTGCATTTACAATTTCATTAATGAACTGTGGATTTTCATT CTTGGCAGGATTTGCGGTATTTGGAACACTCGGATACATGGCAATGACACAAGGAGTACCTATTTCGGAAGTTGTAACAC AAAGTATCGGTCTAGCATTCGTTGCATTCCCTCAAGCACTTTCATTAATGCCTGGTGGAATTATACTTGCTGCAATATTC TTTATCGCGTTATTTGTTGCAGGAATTTCTTCATCAGTTTCACTTGTTGAATCAACTGCATCAGCGGTAATTGATAAGTT TAATCTTCCAAGACACAAAGCAGCTTCAGCAGTTATTGCAACTAGCTTCTTTGCAAGTTTAATTTATGCAACAAACGCAG GTCTTTACTGGTTGGATTCAGTAGACCACTACATCAACTGGTTTACAATTCCGCTTGTTGCAGTACTTGAAATAATCGTT TCAATATGGATATTTAAAGGAAGCAAACTCGAAAAATACATCGACAACCTTTCAGAATACAATTTAGGATCTTTCTGGAA ATTCTTTGCAGGAATATTCTCTCCATTGTTCTTGATATACATGATATTGAATGGAGCTTGGACAGAATTAACTTTAGGCT ACGAAGGCTATGCACCAATATTTTTATTGTTGAGCCTTGGAATTCCAGTATTTGGTCTTGTGGTTTCATTAATTATGCCA ATGATTCCATGGATTGATAAAGGAAGAGAAATCGAAGAATGGGACGAGTTTGTAAAAAAGGATGAAGAATAA
Upstream 100 bases:
>100_bases CTATTTTTTAATGGCGATTTGTTCAAATCTAAATGACAATTTATATATAATTTAAATTTTAAAAATTAACGTTTGTATTA CAAAAAATGGTGGTGATCGT
Downstream 100 bases:
>100_bases GGAGGTAATAAGATGAGTACCGGTGCCATAATAATGTTCTTATTTGGAGCAATCGTTTTATGGGGAGGTTCAGCATATTT CCTCCATAAAACGCTAAAAA
Product: sodium:neurotransmitter symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MAREQWASKMGFILAAVGSAVGLGNIWRFPYMAYENGGGAFLIPYFVALLFVGIMVMVLELALGHSTKGSAPLALRRLGK NFEWIGWLAIATAFIITTYYTAIIAWALVYLVKLFMVGFPTDFGGFFFSDILALSSGHGDLGGFNLPILVGLALIWGVNY IVVNSGVRKGLEKANEILMPVLFFLILALVVRSITLPGGLMGIEYYLTPNFAVLLTPKVWIDAFSQIFFTLSLGFGIMVA YSSYLPKKSDLTASAFTISLMNCGFSFLAGFAVFGTLGYMAMTQGVPISEVVTQSIGLAFVAFPQALSLMPGGIILAAIF FIALFVAGISSSVSLVESTASAVIDKFNLPRHKAASAVIATSFFASLIYATNAGLYWLDSVDHYINWFTIPLVAVLEIIV SIWIFKGSKLEKYIDNLSEYNLGSFWKFFAGIFSPLFLIYMILNGAWTELTLGYEGYAPIFLLLSLGIPVFGLVVSLIMP MIPWIDKGREIEEWDEFVKKDEE
Sequences:
>Translated_503_residues MAREQWASKMGFILAAVGSAVGLGNIWRFPYMAYENGGGAFLIPYFVALLFVGIMVMVLELALGHSTKGSAPLALRRLGK NFEWIGWLAIATAFIITTYYTAIIAWALVYLVKLFMVGFPTDFGGFFFSDILALSSGHGDLGGFNLPILVGLALIWGVNY IVVNSGVRKGLEKANEILMPVLFFLILALVVRSITLPGGLMGIEYYLTPNFAVLLTPKVWIDAFSQIFFTLSLGFGIMVA YSSYLPKKSDLTASAFTISLMNCGFSFLAGFAVFGTLGYMAMTQGVPISEVVTQSIGLAFVAFPQALSLMPGGIILAAIF FIALFVAGISSSVSLVESTASAVIDKFNLPRHKAASAVIATSFFASLIYATNAGLYWLDSVDHYINWFTIPLVAVLEIIV SIWIFKGSKLEKYIDNLSEYNLGSFWKFFAGIFSPLFLIYMILNGAWTELTLGYEGYAPIFLLLSLGIPVFGLVVSLIMP MIPWIDKGREIEEWDEFVKKDEE >Mature_502_residues AREQWASKMGFILAAVGSAVGLGNIWRFPYMAYENGGGAFLIPYFVALLFVGIMVMVLELALGHSTKGSAPLALRRLGKN FEWIGWLAIATAFIITTYYTAIIAWALVYLVKLFMVGFPTDFGGFFFSDILALSSGHGDLGGFNLPILVGLALIWGVNYI VVNSGVRKGLEKANEILMPVLFFLILALVVRSITLPGGLMGIEYYLTPNFAVLLTPKVWIDAFSQIFFTLSLGFGIMVAY SSYLPKKSDLTASAFTISLMNCGFSFLAGFAVFGTLGYMAMTQGVPISEVVTQSIGLAFVAFPQALSLMPGGIILAAIFF IALFVAGISSSVSLVESTASAVIDKFNLPRHKAASAVIATSFFASLIYATNAGLYWLDSVDHYINWFTIPLVAVLEIIVS IWIFKGSKLEKYIDNLSEYNLGSFWKFFAGIFSPLFLIYMILNGAWTELTLGYEGYAPIFLLLSLGIPVFGLVVSLIMPM IPWIDKGREIEEWDEFVKKDEE
Specific function: Putative sodium-dependent transporter [H]
COG id: COG0733
COG function: function code R; Na+-dependent transporters of the SNF family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]
Homologues:
Organism=Homo sapiens, GI21361581, Length=461, Percent_Identity=32.7548806941432, Blast_Score=251, Evalue=9e-67, Organism=Homo sapiens, GI4507043, Length=478, Percent_Identity=33.0543933054393, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI7657587, Length=473, Percent_Identity=32.1353065539112, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI289191377, Length=495, Percent_Identity=32.3232323232323, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI289191351, Length=495, Percent_Identity=32.3232323232323, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI4557046, Length=495, Percent_Identity=32.3232323232323, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI171184408, Length=460, Percent_Identity=32.8260869565217, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI171184406, Length=460, Percent_Identity=32.8260869565217, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI171184404, Length=460, Percent_Identity=32.8260869565217, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI4507041, Length=480, Percent_Identity=30.8333333333333, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI134304856, Length=482, Percent_Identity=31.5352697095436, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI197276623, Length=479, Percent_Identity=32.1503131524008, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI54607094, Length=479, Percent_Identity=32.1503131524008, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI5032097, Length=480, Percent_Identity=32.9166666666667, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI188528618, Length=487, Percent_Identity=31.211498973306, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI194018524, Length=524, Percent_Identity=28.6259541984733, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI218563756, Length=480, Percent_Identity=32.7083333333333, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI67782317, Length=457, Percent_Identity=29.9781181619256, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI67782313, Length=457, Percent_Identity=30.1969365426696, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI67782315, Length=457, Percent_Identity=30.1969365426696, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI92859670, Length=525, Percent_Identity=27.047619047619, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI51468073, Length=520, Percent_Identity=24.6153846153846, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI300360519, Length=303, Percent_Identity=31.6831683168317, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI289191353, Length=413, Percent_Identity=29.7820823244552, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI11181770, Length=520, Percent_Identity=25, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI58219014, Length=304, Percent_Identity=32.5657894736842, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI33354281, Length=320, Percent_Identity=30.9375, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI6005715, Length=260, Percent_Identity=34.2307692307692, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI218563758, Length=401, Percent_Identity=30.1745635910224, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI12408638, Length=499, Percent_Identity=24.6492985971944, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI197276625, Length=119, Percent_Identity=42.0168067226891, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI21361693, Length=120, Percent_Identity=38.3333333333333, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI226437581, Length=273, Percent_Identity=26.007326007326, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI55749589, Length=474, Percent_Identity=20.253164556962, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17555248, Length=513, Percent_Identity=31.3840155945419, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI17554804, Length=389, Percent_Identity=34.7043701799486, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI71995588, Length=532, Percent_Identity=30.4511278195489, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI133952791, Length=510, Percent_Identity=28.8235294117647, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI25146584, Length=490, Percent_Identity=28.3673469387755, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI17535731, Length=473, Percent_Identity=29.1754756871036, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI71998244, Length=450, Percent_Identity=30.2222222222222, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17569475, Length=461, Percent_Identity=25.5965292841649, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI212642127, Length=270, Percent_Identity=31.8518518518519, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI115534083, Length=500, Percent_Identity=21.2, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17542050, Length=115, Percent_Identity=41.7391304347826, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25143236, Length=481, Percent_Identity=22.4532224532225, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17542048, Length=391, Percent_Identity=24.0409207161125, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI221329674, Length=503, Percent_Identity=29.8210735586481, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24639514, Length=503, Percent_Identity=29.8210735586481, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24762620, Length=497, Percent_Identity=32.3943661971831, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24639516, Length=523, Percent_Identity=28.6806883365201, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI45550877, Length=490, Percent_Identity=30.2040816326531, Blast_Score=215, Evalue=7e-56, Organism=Drosophila melanogaster, GI17136952, Length=456, Percent_Identity=28.9473684210526, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI281365034, Length=485, Percent_Identity=28.8659793814433, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI281364394, Length=456, Percent_Identity=28.9473684210526, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI28574704, Length=456, Percent_Identity=28.9473684210526, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17136950, Length=456, Percent_Identity=28.9473684210526, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI28574702, Length=456, Percent_Identity=28.9473684210526, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24652942, Length=502, Percent_Identity=29.0836653386454, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI45551088, Length=502, Percent_Identity=29.0836653386454, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI45551183, Length=426, Percent_Identity=31.6901408450704, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24582567, Length=436, Percent_Identity=31.651376146789, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI19921352, Length=491, Percent_Identity=28.1059063136456, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24584353, Length=491, Percent_Identity=28.1059063136456, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI281364136, Length=512, Percent_Identity=29.296875, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI281363702, Length=513, Percent_Identity=31.9688109161793, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24661428, Length=497, Percent_Identity=28.9738430583501, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI19921936, Length=515, Percent_Identity=28.5436893203883, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24655079, Length=517, Percent_Identity=26.4990328820116, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24654186, Length=346, Percent_Identity=31.5028901734104, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24639853, Length=491, Percent_Identity=26.4765784114053, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI281363700, Length=340, Percent_Identity=33.8235294117647, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24582569, Length=399, Percent_Identity=29.3233082706767, Blast_Score=147, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000175 [H]
Pfam domain/function: PF00209 SNF [H]
EC number: NA
Molecular weight: Translated: 55107; Mature: 54976
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00610 NA_NEUROTRAN_SYMP_1 ; PS50267 NA_NEUROTRAN_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREQWASKMGFILAAVGSAVGLGNIWRFPYMAYENGGGAFLIPYFVALLFVGIMVMVLE CCHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHH LALGHSTKGSAPLALRRLGKNFEWIGWLAIATAFIITTYYTAIIAWALVYLVKLFMVGFP HHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TDFGGFFFSDILALSSGHGDLGGFNLPILVGLALIWGVNYIVVNSGVRKGLEKANEILMP CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHH VLFFLILALVVRSITLPGGLMGIEYYLTPNFAVLLTPKVWIDAFSQIFFTLSLGFGIMVA HHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH YSSYLPKKSDLTASAFTISLMNCGFSFLAGFAVFGTLGYMAMTQGVPISEVVTQSIGLAF HHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VAFPQALSLMPGGIILAAIFFIALFVAGISSSVSLVESTASAVIDKFNLPRHKAASAVIA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TSFFASLIYATNAGLYWLDSVDHYINWFTIPLVAVLEIIVSIWIFKGSKLEKYIDNLSEY HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC NLGSFWKFFAGIFSPLFLIYMILNGAWTELTLGYEGYAPIFLLLSLGIPVFGLVVSLIMP CCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH MIPWIDKGREIEEWDEFVKKDEE HCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure AREQWASKMGFILAAVGSAVGLGNIWRFPYMAYENGGGAFLIPYFVALLFVGIMVMVLE CHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHH LALGHSTKGSAPLALRRLGKNFEWIGWLAIATAFIITTYYTAIIAWALVYLVKLFMVGFP HHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TDFGGFFFSDILALSSGHGDLGGFNLPILVGLALIWGVNYIVVNSGVRKGLEKANEILMP CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHH VLFFLILALVVRSITLPGGLMGIEYYLTPNFAVLLTPKVWIDAFSQIFFTLSLGFGIMVA HHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH YSSYLPKKSDLTASAFTISLMNCGFSFLAGFAVFGTLGYMAMTQGVPISEVVTQSIGLAF HHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VAFPQALSLMPGGIILAAIFFIALFVAGISSSVSLVESTASAVIDKFNLPRHKAASAVIA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TSFFASLIYATNAGLYWLDSVDHYINWFTIPLVAVLEIIVSIWIFKGSKLEKYIDNLSEY HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC NLGSFWKFFAGIFSPLFLIYMILNGAWTELTLGYEGYAPIFLLLSLGIPVFGLVVSLIMP CCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH MIPWIDKGREIEEWDEFVKKDEE HCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]