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The map label for this gene is ydjH [C]

Identifier: 45357981

GI number: 45357981

Start: 419415

End: 420323

Strand: Direct

Name: ydjH [C]

Synonym: MMP0418

Alternate gene names: 45357981

Gene position: 419415-420323 (Clockwise)

Preceding gene: 45357980

Following gene: 45357982

Centisome position: 25.25

GC content: 36.52

Gene sequence:

>909_bases
ATGGACAAAATTGGTAAAATAACAGCGGTAGGCCATATTGCACTTGATTACATATTCAATGTGGATAAATTTCCAGAATT
AAACACTTCAATGCAGATTCCAACTGCTAAAAAATACTATGGCGGTGCTGCATGCAATGTTGCAGCAGAAATTGCAAATT
TAGGCGTAAAATCAGAAATACTTTCATGTGTCGGAACTGACTTTAAAGCTTCAGGATATGGGGAATATTTAGAAAAATTG
GGCGTTTCAACTAAAAATGTATATGTTTCAGAGGAAGAAGAAACTCCAAAGGCATGGATTTTTACTGATCCTCAAAACAA
CCAGATAACGTACTTTTTATGGGGTGCTGCAAAACACTACCCTGAAATTGAAGTTCCAGAATTTGATTCAGAAATTGTAC
ACCTTGCAACTGGGGACCCCAATTACAATTTAAAATGTGCACAAAAAGCAAGTTCAAAAGGAATTTTCGTATCATTCGAT
CCGGGACAGGATTTAACATTATATTCTAAAGAAAACATGGAAAACATCATCGAAAACGTTGATTTTTTATTTATGAACAA
CCACGAATTCCAGAGAACCCTTGATTTATTGAATATTTCTGAAAAAGAGCTGATTAGTCGAGTTAAAGTTTTAATTGTAA
CTTACGGAAAACAGGGAAGCATCATATATTCAGAAGATGAAGCAATCAAAGTTCCTGCGATATTAACCCAAGCAAAAGAC
CCAACTGGTGCGGGAGACAGCTACCGGGCTGGATTTTTAACTGCGTATTTAAAAGGGCACGATTTAAAGAACTGTGGACT
TGCAGGTTCATGTGTGGCTTCTTTTGTTGTGGAACAGGTAGGCTGTCAAACCAACCTTCCTTCATGGGAAATGGTTATTG
AACGACTTAACGAAAATAACCTTCTATAA

Upstream 100 bases:

>100_bases
GGGGTAGTTGTAGGTTCTGCAATTTACAAAAATATGATAAATTTAAAAGATGCGATTGAAGCAGTAAATAAAAGTAATTA
ATAATGATTTTGGTGGTTTG

Downstream 100 bases:

>100_bases
TTTTTTCTTTTTTTTAGTTTTTATTACCTATTTTTCCAAAAGCTATTTTTTAATGGCGATTTGTTCAAATCTAAATGACA
ATTTATATATAATTTAAATT

Product: carbohydrate kinase PfkB

Products: ADP; D-ribose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MDKIGKITAVGHIALDYIFNVDKFPELNTSMQIPTAKKYYGGAACNVAAEIANLGVKSEILSCVGTDFKASGYGEYLEKL
GVSTKNVYVSEEEETPKAWIFTDPQNNQITYFLWGAAKHYPEIEVPEFDSEIVHLATGDPNYNLKCAQKASSKGIFVSFD
PGQDLTLYSKENMENIIENVDFLFMNNHEFQRTLDLLNISEKELISRVKVLIVTYGKQGSIIYSEDEAIKVPAILTQAKD
PTGAGDSYRAGFLTAYLKGHDLKNCGLAGSCVASFVVEQVGCQTNLPSWEMVIERLNENNLL

Sequences:

>Translated_302_residues
MDKIGKITAVGHIALDYIFNVDKFPELNTSMQIPTAKKYYGGAACNVAAEIANLGVKSEILSCVGTDFKASGYGEYLEKL
GVSTKNVYVSEEEETPKAWIFTDPQNNQITYFLWGAAKHYPEIEVPEFDSEIVHLATGDPNYNLKCAQKASSKGIFVSFD
PGQDLTLYSKENMENIIENVDFLFMNNHEFQRTLDLLNISEKELISRVKVLIVTYGKQGSIIYSEDEAIKVPAILTQAKD
PTGAGDSYRAGFLTAYLKGHDLKNCGLAGSCVASFVVEQVGCQTNLPSWEMVIERLNENNLL
>Mature_302_residues
MDKIGKITAVGHIALDYIFNVDKFPELNTSMQIPTAKKYYGGAACNVAAEIANLGVKSEILSCVGTDFKASGYGEYLEKL
GVSTKNVYVSEEEETPKAWIFTDPQNNQITYFLWGAAKHYPEIEVPEFDSEIVHLATGDPNYNLKCAQKASSKGIFVSFD
PGQDLTLYSKENMENIIENVDFLFMNNHEFQRTLDLLNISEKELISRVKVLIVTYGKQGSIIYSEDEAIKVPAILTQAKD
PTGAGDSYRAGFLTAYLKGHDLKNCGLAGSCVASFVVEQVGCQTNLPSWEMVIERLNENNLL

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=302, Percent_Identity=25.4966887417219, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: 2.7.1.15

Molecular weight: Translated: 33441; Mature: 33441

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIGKITAVGHIALDYIFNVDKFPELNTSMQIPTAKKYYGGAACNVAAEIANLGVKSEI
CCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEECCCCHHHCCCHHHHHHHHHHHCCHHHHH
LSCVGTDFKASGYGEYLEKLGVSTKNVYVSEEEETPKAWIFTDPQNNQITYFLWGAAKHY
HHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCC
PEIEVPEFDSEIVHLATGDPNYNLKCAQKASSKGIFVSFDPGQDLTLYSKENMENIIENV
CCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCEEEECHHHHHHHHCCC
DFLFMNNHEFQRTLDLLNISEKELISRVKVLIVTYGKQGSIIYSEDEAIKVPAILTQAKD
EEEEECCCHHHHHHHHHCCCHHHHHHHEEEEEEEECCCCCEEECCCCCEECCHHEECCCC
PTGAGDSYRAGFLTAYLKGHDLKNCGLAGSCVASFVVEQVGCQTNLPSWEMVIERLNENN
CCCCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
LL
CC
>Mature Secondary Structure
MDKIGKITAVGHIALDYIFNVDKFPELNTSMQIPTAKKYYGGAACNVAAEIANLGVKSEI
CCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEECCCCHHHCCCHHHHHHHHHHHCCHHHHH
LSCVGTDFKASGYGEYLEKLGVSTKNVYVSEEEETPKAWIFTDPQNNQITYFLWGAAKHY
HHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCC
PEIEVPEFDSEIVHLATGDPNYNLKCAQKASSKGIFVSFDPGQDLTLYSKENMENIIENV
CCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCEEEECHHHHHHHHCCC
DFLFMNNHEFQRTLDLLNISEKELISRVKVLIVTYGKQGSIIYSEDEAIKVPAILTQAKD
EEEEECCCHHHHHHHHHCCCHHHHHHHEEEEEEEECCCCCEEECCCCCEECCHHEECCCC
PTGAGDSYRAGFLTAYLKGHDLKNCGLAGSCVASFVVEQVGCQTNLPSWEMVIERLNENN
CCCCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
LL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-ribose

Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]