| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
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The map label for this gene is hisA
Identifier: 45357980
GI number: 45357980
Start: 418670
End: 419395
Strand: Direct
Name: hisA
Synonym: MMP0417
Alternate gene names: 45357980
Gene position: 418670-419395 (Clockwise)
Preceding gene: 45357979
Following gene: 45357981
Centisome position: 25.2
GC content: 33.88
Gene sequence:
>726_bases GTGCTAGTTATTCCTGCAGTTGATATGAAAAATAAAAAATGTGTACAGCTTATCCAGGGAAATCCTGATAAAAAACACGT TGAATTAGATAATCCTCCTGAAATTGCAAAAAAATGGGTAAATGAAGGTGCAGAAATGCTTCACCTCGTGGACCTTGATG GTGCACTTGACGGAAAACGGGTAAACGATGAATTTATCGAAGAAATAATTAAAAAATCTGGGGTACCTGTTCAAATTGGT GGCGGAATTCGATCAATCGAAGATGCAGAATACCTCGTTGAAAAAGGGGCTAAAAAAGTAATTATTGGAACTATTGCTGT AGAAAATCCAGAAATAATAAAAGAACTTTCTAAACGTATCGGCAGTGAAAAAATAATGGTTTCACTTGATGCAAAAGACG GCAAAGTTGTAATAAAAGGCTGGAAAGAAAAAACAAAATACACTCCTGTTCAAATTGGAAAAATACTCGAAGAAATGGGC GCTGGAAGTATTTTATTTACAAATGTAGATAGTGAAGGTCTTTTGAATGGAATAAATATCGAACCAACAAAAGAACTTGT CGACAACTTGAAAATACCTATTGTAGCATCAGGCGGCGTTACAACAATCGATGATCTTTTAAAATTAAAAGAAATCGGGG TATATGGGGTAGTTGTAGGTTCTGCAATTTACAAAAATATGATAAATTTAAAAGATGCGATTGAAGCAGTAAATAAAAGT AATTAA
Upstream 100 bases:
>100_bases TTTAGATATTCATATATAGCTTGAAATTTAATGTAAAATAGATTTTTAGCATACGTAAATTTTCTATTTTTTAAGACGTA TTTACAGTAAGGTGAATATT
Downstream 100 bases:
>100_bases TAATGATTTTGGTGGTTTGATGGACAAAATTGGTAAAATAACAGCGGTAGGCCATATTGCACTTGATTACATATTCAATG TGGATAAATTTCCAGAATTA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MLVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKRVNDEFIEEIIKKSGVPVQIG GGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKRIGSEKIMVSLDAKDGKVVIKGWKEKTKYTPVQIGKILEEMG AGSILFTNVDSEGLLNGINIEPTKELVDNLKIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAIEAVNKS N
Sequences:
>Translated_241_residues MLVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKRVNDEFIEEIIKKSGVPVQIG GGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKRIGSEKIMVSLDAKDGKVVIKGWKEKTKYTPVQIGKILEEMG AGSILFTNVDSEGLLNGINIEPTKELVDNLKIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAIEAVNKS N >Mature_241_residues MLVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKRVNDEFIEEIIKKSGVPVQIG GGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKRIGSEKIMVSLDAKDGKVVIKGWKEKTKYTPVQIGKILEEMG AGSILFTNVDSEGLLNGINIEPTKELVDNLKIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAIEAVNKS N
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=239, Percent_Identity=31.7991631799163, Blast_Score=137, Evalue=6e-34, Organism=Escherichia coli, GI1788336, Length=239, Percent_Identity=27.1966527196653, Blast_Score=108, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_METMP (P62357)
Other databases:
- EMBL: BX950229 - RefSeq: NP_987537.1 - ProteinModelPortal: P62357 - SMR: P62357 - GeneID: 2762631 - GenomeReviews: BX950229_GR - KEGG: mmp:MMP0417 - NMPDR: fig|267377.1.peg.417 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK13585 - BioCyc: MMAR267377:MMP0417-MONOMER - BRENDA: 5.3.1.16 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26205; Mature: 26205
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 130-130
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKR CEEECCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCHHEEEEEECCCCCCCCC VNDEFIEEIIKKSGVPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKRI CCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHC GSEKIMVSLDAKDGKVVIKGWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLNGINI CCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC EPTKELVDNLKIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAIEAVNKS CCHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC N C >Mature Secondary Structure MLVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKR CEEECCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCHHEEEEEECCCCCCCCC VNDEFIEEIIKKSGVPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKRI CCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHC GSEKIMVSLDAKDGKVVIKGWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLNGINI CCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC EPTKELVDNLKIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAIEAVNKS CCHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA