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The map label for this gene is ybbM [C]

Identifier: 45357734

GI number: 45357734

Start: 179382

End: 180128

Strand: Direct

Name: ybbM [C]

Synonym: MMP0171

Alternate gene names: 45357734

Gene position: 179382-180128 (Clockwise)

Preceding gene: 45357733

Following gene: 45357736

Centisome position: 10.8

GC content: 34.14

Gene sequence:

>747_bases
ATGATAAAAGTGTTTGAATCTCTTTTAATTTCTTTTTCATTCGTTTTACTTTCTTTAATATTAATTTTTAAGGAAAAACT
AGGGATCGGAAAAGAAATATTTATTGCAGAAATCATGGCACTAATCCAGCTTGTTGTTCTTGGTTACGTGATTGGAATAG
TATTTAACCTTGGAATTTATTATGCCAGTATTATGATACTGTTCATGGTGTCAGTTTCAGCATTTATGGTTAAAAGAAAT
GTAACCAAAGAAAAAAATAGAAAAATAGTATGCGCTGCATTTTTATCAACGATTACGATAACGATAATTTCTCTGATCAT
TTTAACAGTATCAAAAACGGTATTATTCGAAGTACGCTATTTAATCCCTTTAATGGGCATGGTTATTGGTAATTCTACAA
ATGCAATGTCTATCGGGTTAGAGAGATTTTTAAGTGATTTAAAATCTGAAAAAGACGTACTCTGGGGCTATCTTGCACTC
GGGGCAACCGAAAAACAGGCGGTAAATACGTTTGTTAAAAAAGCAGTTCGAGCTGCATTAACGCCACATTTAAACTCCAC
AAAAGCAGTAGGGCTCATATTTATTCCAGGAGCAATGGTTGGAATGCTTCTTGCAGGCGTGGATCCTTTAGAAGCTGCAA
AGGTCCAGATAACCATAATGTGGATGATAATGGCATCTAACATATTTTCTGTAACGATTGCATGCTACCTGCTCTACAAG
GAATTTATTCACCAGATTTCTTCTTAA

Upstream 100 bases:

>100_bases
GGTAAATACTGCACCGGGTACAAAAGGCTTTAGGTCCCTTGGAATTGATGTTGATAAAAGAATTGCAGAATGCCTTATAA
AATACAAAAAAAGCTAAAAG

Downstream 100 bases:

>100_bases
ATTTAACGAACTTTTCTAAACAATATTACGAAGAATACTGAAGAAACAGCAGCTAAAATGACTGCAACAAGCCTGCATTC
GTACGGAGTCGTTGGAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MIKVFESLLISFSFVLLSLILIFKEKLGIGKEIFIAEIMALIQLVVLGYVIGIVFNLGIYYASIMILFMVSVSAFMVKRN
VTKEKNRKIVCAAFLSTITITIISLIILTVSKTVLFEVRYLIPLMGMVIGNSTNAMSIGLERFLSDLKSEKDVLWGYLAL
GATEKQAVNTFVKKAVRAALTPHLNSTKAVGLIFIPGAMVGMLLAGVDPLEAAKVQITIMWMIMASNIFSVTIACYLLYK
EFIHQISS

Sequences:

>Translated_248_residues
MIKVFESLLISFSFVLLSLILIFKEKLGIGKEIFIAEIMALIQLVVLGYVIGIVFNLGIYYASIMILFMVSVSAFMVKRN
VTKEKNRKIVCAAFLSTITITIISLIILTVSKTVLFEVRYLIPLMGMVIGNSTNAMSIGLERFLSDLKSEKDVLWGYLAL
GATEKQAVNTFVKKAVRAALTPHLNSTKAVGLIFIPGAMVGMLLAGVDPLEAAKVQITIMWMIMASNIFSVTIACYLLYK
EFIHQISS
>Mature_248_residues
MIKVFESLLISFSFVLLSLILIFKEKLGIGKEIFIAEIMALIQLVVLGYVIGIVFNLGIYYASIMILFMVSVSAFMVKRN
VTKEKNRKIVCAAFLSTITITIISLIILTVSKTVLFEVRYLIPLMGMVIGNSTNAMSIGLERFLSDLKSEKDVLWGYLAL
GATEKQAVNTFVKKAVRAALTPHLNSTKAVGLIFIPGAMVGMLLAGVDPLEAAKVQITIMWMIMASNIFSVTIACYLLYK
EFIHQISS

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=249, Percent_Identity=34.136546184739, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 27390; Mature: 27390

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVFESLLISFSFVLLSLILIFKEKLGIGKEIFIAEIMALIQLVVLGYVIGIVFNLGIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YASIMILFMVSVSAFMVKRNVTKEKNRKIVCAAFLSTITITIISLIILTVSKTVLFEVRY
HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPLMGMVIGNSTNAMSIGLERFLSDLKSEKDVLWGYLALGATEKQAVNTFVKKAVRAAL
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TPHLNSTKAVGLIFIPGAMVGMLLAGVDPLEAAKVQITIMWMIMASNIFSVTIACYLLYK
CCCCCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFIHQISS
HHHHHHCC
>Mature Secondary Structure
MIKVFESLLISFSFVLLSLILIFKEKLGIGKEIFIAEIMALIQLVVLGYVIGIVFNLGIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YASIMILFMVSVSAFMVKRNVTKEKNRKIVCAAFLSTITITIISLIILTVSKTVLFEVRY
HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPLMGMVIGNSTNAMSIGLERFLSDLKSEKDVLWGYLALGATEKQAVNTFVKKAVRAAL
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TPHLNSTKAVGLIFIPGAMVGMLLAGVDPLEAAKVQITIMWMIMASNIFSVTIACYLLYK
CCCCCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFIHQISS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]