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The map label for this gene is 45357646

Identifier: 45357646

GI number: 45357646

Start: 93984

End: 95063

Strand: Direct

Name: 45357646

Synonym: MMP0083

Alternate gene names: NA

Gene position: 93984-95063 (Clockwise)

Preceding gene: 45357645

Following gene: 45357658

Centisome position: 5.66

GC content: 34.72

Gene sequence:

>1080_bases
ATGAAGTCATACTTGAACTTAAAAGAAGAAGTATGGGATAAAGAAACATGCTCTGGTTGTGGAGCGTGTGTTTCTGTATG
CCCTACTGAAAATATATACTTTAAACAGCAAAGTCCCGTGCAATTTGATTGTGATGAATGCGCATGTATTATTGTGCCAA
CTGAAAATGGGGAATCCCCAATTTCGGCGGAATTTTGTAAGGTAACTCTCTACGATGTAAATTGCGGTGCATGCTACAAT
GCATGTCCAAGAACAAAAGAAAGACACATCTTTAATTTAGAAAAAGTTCCAGGAAGAGTTATTGAAAATTATAAGGCAAA
ATCAACACTCGAAACTAAAAATATTCAAAGTGGTGGTGTTGTAACCGCAATTTTAGCAAATGCTTTTGACGAAGATTTAA
TTGACGGCGCAATTGTTATGATGGAAGATAAATGGACAATGGATCCAAAATCATACCTTGCGACATCAAAAGAAGACGTT
TTAAAAACTGCTGGAAGCAGATACAACTGGAACGTTCCAATCCTCGAAGTTTTAAAAGAAGCTGTAATGGTAAAAAAATT
AAACAAAATTGCAGTTGTTGGAACACCATGTGTTATTAATGCAGTTTACCAGATGATGGCAACAAACAACGATTTGGTTG
AACCTTTCAAAAAGGCAATAAGGTTAAAAATATCACTGTTCTGTTTTGAAACCTTTGACTATGATAAAATGCTCAAAAAG
CTAAAAGAAGTTGAAGTAAATCCGTGGGATATTAAAAAAATGGAAATTGACAAGGGAAAACTCATAGTTTCAACAATACA
CGGCAACGTATTCAATTTTAAAATTGATGAAATGGATGAATATGTCAGAAAAGGATGCAAAGTCTGTAGGGACTTTACAG
GAATTTCTTCAGATATTTCAGTTGGAAACGTTGGAACGCCTGAAGGATACTCCACAGTTTTAGTAAGAAACAAATGGGGT
AAAGGATTCTTTGATAGAGCCGTAATCAACGGATACGTTTCAGTTGAGGGAGAAGCATCAATAGACCCAGTAATATCACT
TTCAAAAAAGAAAATGGAAAGAAAAGATATTGAATTTTAA

Upstream 100 bases:

>100_bases
AATATACAAAAATCGCTCCAATTTCAAGCAGGCCATTCCAGAAACTGTACACACCTGATTTGAGATAATTAAAATACTTT
AAGAGATTTAGGTGGAAATT

Downstream 100 bases:

>100_bases
TTCCTTTTAATTTTTAATAAACTTACTTTTTTAGAAATAAATTTGATTAACTAAAATTTAACTTTATAAAATGTTAAAAA
GACGATTTATATAAAAAGTC

Product: coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKSYLNLKEEVWDKETCSGCGACVSVCPTENIYFKQQSPVQFDCDECACIIVPTENGESPISAEFCKVTLYDVNCGACYN
ACPRTKERHIFNLEKVPGRVIENYKAKSTLETKNIQSGGVVTAILANAFDEDLIDGAIVMMEDKWTMDPKSYLATSKEDV
LKTAGSRYNWNVPILEVLKEAVMVKKLNKIAVVGTPCVINAVYQMMATNNDLVEPFKKAIRLKISLFCFETFDYDKMLKK
LKEVEVNPWDIKKMEIDKGKLIVSTIHGNVFNFKIDEMDEYVRKGCKVCRDFTGISSDISVGNVGTPEGYSTVLVRNKWG
KGFFDRAVINGYVSVEGEASIDPVISLSKKKMERKDIEF

Sequences:

>Translated_359_residues
MKSYLNLKEEVWDKETCSGCGACVSVCPTENIYFKQQSPVQFDCDECACIIVPTENGESPISAEFCKVTLYDVNCGACYN
ACPRTKERHIFNLEKVPGRVIENYKAKSTLETKNIQSGGVVTAILANAFDEDLIDGAIVMMEDKWTMDPKSYLATSKEDV
LKTAGSRYNWNVPILEVLKEAVMVKKLNKIAVVGTPCVINAVYQMMATNNDLVEPFKKAIRLKISLFCFETFDYDKMLKK
LKEVEVNPWDIKKMEIDKGKLIVSTIHGNVFNFKIDEMDEYVRKGCKVCRDFTGISSDISVGNVGTPEGYSTVLVRNKWG
KGFFDRAVINGYVSVEGEASIDPVISLSKKKMERKDIEF
>Mature_359_residues
MKSYLNLKEEVWDKETCSGCGACVSVCPTENIYFKQQSPVQFDCDECACIIVPTENGESPISAEFCKVTLYDVNCGACYN
ACPRTKERHIFNLEKVPGRVIENYKAKSTLETKNIQSGGVVTAILANAFDEDLIDGAIVMMEDKWTMDPKSYLATSKEDV
LKTAGSRYNWNVPILEVLKEAVMVKKLNKIAVVGTPCVINAVYQMMATNNDLVEPFKKAIRLKISLFCFETFDYDKMLKK
LKEVEVNPWDIKKMEIDKGKLIVSTIHGNVFNFKIDEMDEYVRKGCKVCRDFTGISSDISVGNVGTPEGYSTVLVRNKWG
KGFFDRAVINGYVSVEGEASIDPVISLSKKKMERKDIEF

Specific function: Unknown

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525 [H]

Pfam domain/function: PF00037 Fer4; PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: NA

Molecular weight: Translated: 40359; Mature: 40359

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYLNLKEEVWDKETCSGCGACVSVCPTENIYFKQQSPVQFDCDECACIIVPTENGESP
CCCHHCCHHHHCCHHHHCHHHHHHCCCCCCCEEEECCCCCEECCCCEEEEEEECCCCCCC
ISAEFCKVTLYDVNCGACYNACPRTKERHIFNLEKVPGRVIENYKAKSTLETKNIQSGGV
CCCEEEEEEEEECCCCCHHCCCCCCCCCCEEEHHHCCHHHHHCCCCCCCCCCCCCCCCCH
VTAILANAFDEDLIDGAIVMMEDKWTMDPKSYLATSKEDVLKTAGSRYNWNVPILEVLKE
HHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH
AVMVKKLNKIAVVGTPCVINAVYQMMATNNDLVEPFKKAIRLKISLFCFETFDYDKMLKK
HHHHHHHCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEECCCHHHHHHH
LKEVEVNPWDIKKMEIDKGKLIVSTIHGNVFNFKIDEMDEYVRKGCKVCRDFTGISSDIS
HHHCCCCCCCCEEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCC
VGNVGTPEGYSTVLVRNKWGKGFFDRAVINGYVSVEGEASIDPVISLSKKKMERKDIEF
CCCCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSYLNLKEEVWDKETCSGCGACVSVCPTENIYFKQQSPVQFDCDECACIIVPTENGESP
CCCHHCCHHHHCCHHHHCHHHHHHCCCCCCCEEEECCCCCEECCCCEEEEEEECCCCCCC
ISAEFCKVTLYDVNCGACYNACPRTKERHIFNLEKVPGRVIENYKAKSTLETKNIQSGGV
CCCEEEEEEEEECCCCCHHCCCCCCCCCCEEEHHHCCHHHHHCCCCCCCCCCCCCCCCCH
VTAILANAFDEDLIDGAIVMMEDKWTMDPKSYLATSKEDVLKTAGSRYNWNVPILEVLKE
HHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH
AVMVKKLNKIAVVGTPCVINAVYQMMATNNDLVEPFKKAIRLKISLFCFETFDYDKMLKK
HHHHHHHCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEECCCHHHHHHH
LKEVEVNPWDIKKMEIDKGKLIVSTIHGNVFNFKIDEMDEYVRKGCKVCRDFTGISSDIS
HHHCCCCCCCCEEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCC
VGNVGTPEGYSTVLVRNKWGKGFFDRAVINGYVSVEGEASIDPVISLSKKKMERKDIEF
CCCCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]