| Definition | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. |
|---|---|
| Accession | NC_005773 |
| Length | 5,928,787 |
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The map label for this gene is hopAS1
Identifier: 71737300
GI number:
Start: 5376068
End: 5380153
Strand: Direct
Name: hopAS1
Synonym: PSPPH_4736
Alternate gene names: NA
Gene position: NA
Preceding gene: 71736436
Following gene: 71733742
Centisome position: NA
GC content: NA
Gene sequence:
>4086_bases ATGACCTTAAGAATCAATACTCGTTCTGCTACCCCGGTTGTGCCTCTGGAAACAGGATCTTCGTCGCAGCCGGAAGTACC GTCTGTCACGGCAAGACCGACTGAGCCTCCGCCAGTCGCCAATCCTGCTGCACCTAAATCAGCGCCAGGTGTTCAGCAAG CTCACGGGCTGAAGACGCGCATCGCTGGCAAGCTTTCCGAGCGTCAGACCAATTTCAGTCTCGGTATTCCCGGCACCGGT CGTACTTTAAACCGGCCCTTGCGCAGCGGGATTCCGGAGGAAGGTGAGCACCTATCGAGCGAGGAGAAACACGATCCGTT GCTAAAAGAAGCGCATGAACTGCAGCGCATGGTCGATTCGGCGCTGACCCACCTGAAGGCGGCGCCAACGTCTCTCTGGG AGCGCCCCGCCCCTTCAACGGTAAGGGGTATTACCACCAAGATTTTTCCGTGGCTAAAGCCTGCCCCGCTACGCGAGGTT GCCAGCAATGGCAGCAACGCCAAGACCAAGGCCGATAACTCAAAGCAAAGCCCTGAAACCATCGCAGCGGCGGTGAAAGA GTTGAGCACCCGGCTGGATCATCAGAGCAAGGTGCTCGCCACAGCCACCCTCGCATTGGTCGCTGCGCGCGAGCATCTTG AATCGCTCGAACAGACCACCCCACCCACGTCGACCGAACGACTGAACCATGCCAGGGCTCGCGTTCAACAGGCCGACTCC ACCACCCGCCTGGCCAGCCAGCAACTTCGGGAGCTGATTCAGGGCACAGAGGTACTGCAACTGGGCGCGCTGAGTGAGGG GCAGGATCAGGTTAAACAGAAAGCCGAGTTCTCTCAGCAGTGGCTGGGCGAGTTGCGCACACGCATGCAGGCGCTGGATG TCCGTTTCGCCGACCGGCACGCTGCCATCGAAATCGAACTGCAACTCAAGGTGGCAGAGACTCGTGAGCTGATTTCACTC GATCACGACATGACCGCGGCCGAGCACACGGCCGCGCACGCCAATACGCAGCTTTCTGCGTTGCGCGCCCAGCGACAGGA GACGCCCGAAGGGTCAGACGAAGCCGACAGGCTGGACACCGCCATTGGACAGACGCTTGCAACGCGTTCACAGGCCATGC AAACACATCAGCAACTGACAAAAAGACTGGTGCGGGTCGATGCCGATGTTGCGCGCCTGAACGACGAACTGGGCAAGATT CATCAGCGAATCGCGATCGTCAATGACGAGCGCTTTGCACTCAAGACACTTGATCAGAAACTGCCCGCATCAGACCAGGT CACCACGCCTGCAGAGGGCGAGGCCCAAGAACGAATCGATAAAACCGCTCTCAAGAACGTCCGCGAGCAGTACCTCGCCA GTCAGATCAGTCAAGCGCACGCTTTTGCAGCAACCGGTGCGGATGAAATTCAAGCGGCCCTGCAACGTATCGGCGATCGC CTGCAAGGCACGCCGCCACCCACATCGCTGCCAGCTTTCGCGGTTATCGAGGTAATAACGTCGGCGCTGGCAGACGTGAC GGGCAATGACGCCACACGTGCCAACCGTGTGCTCGACGTACTGAGCCAGCACCCACTGGAACATTGGCCACGCGTGGCCG AAGAAATGTCGAAGTCGGTCAGGACCCGCAGCGCCACAAACAACAGCATTCAGCAGGACACGCTCAACCTCTGTCGAAAA CTGGCAACTGTGCCGCGTGGCATGGAAATGCTGCAAGTGCTCTCCAGCGATGGCACTGCACCGATCGTGGCCGAGCGGGC CAAGCCTTTGCGCGTGTTCTGGAATGCCGATGAAGCGCAGCAGAAAGAGCCCGACGGCAAGGTCAAGGCATGGCTGCAAA CCGCCAAACAGGTGGCGCGCAGCAAGCTGGATGGAGACGAGAAGTCGTTCGACGATGTTGATCACGCCGCCTTCAACGCG GTTCGTAACGGTTATTTCAGCAACGCTCCCGGCACGCCCTATGCGCAGCATGACCAGCGCCTGAAAAAAGCGACGATGGA ATGGGTCATGCGCGCCGTGGCGGCCAATACCCCGGAGCAAGCAACAGCAACTGCCCCAGCGAAAAGCTCGTTACCACGCC GCCTGGTCCCAACGCTGAACAAAACACCCTTTGCTAAATCGACGCTGGATCGGGCCTACTCGGTGGGCGAAAGCATGGGC CTGCAATCGCCCAGAAAGCAGGTTGATCAGGTGATTTCTGCGCGTATCAGCATGCTGGAAGAAACCCTGAAAAACGCCAA GGGTGCACCAGGACTGCAACTTGAAATCCCGGCCGCCCAAGCCCTGCTCGATCACCTCAAATCTCTGGAAAAGAAAGGCA CTCACCTGTCGCAGGTGACGCTTAAAAATCGCGATGGCAAATCGATGCAAAGCCTGCTTAAGGCCCGCGTTCAACAGCAG CGGCTATCACAGATATGGGATAAGCCGGACGCGAACGGCAAGCGTGCAGTCAACGTACTGCACAAAGCTCAGCACATCGA ACTGCCGCCGCTGTACAGCGAACTGGCGAACAGCAAGCTGTCGGTCTACGAGGCAATCAATCGCGTCGATGAGCACCTGC GCGAGATATTGCCGCCAGCGCTGCAACCTGCTCAGTCTGTTGAAGAGGTGCTTGATCAGGACTTGAACGCGGCGATAAAA CTGCTGAAAACCCGGCATTTGAGCGAGAAAAGCGACATTGTGACGTTTTTCAAGCCGTTCATTCTTGAAAGCCGCCTGCG CGACCGGCTGCGGCTGGGCGGCGGAGGCACGCTGGGCGTAGGCTTGCCGTCGCTGCCCTACAGCTTGATATCGCCCATCG TGTCACCGATCTTTTCGGCAGAGAAATCTCGCAGTGACGAAGCGTTTGCCCAGTTGTTCATGCCGATTCTGGGGATGGAA ATGTCCTTCGGCAAAACACGAACCGAAGCCGCCGAGGTCACCATCGGTGTGGCGGCAGGAAGCGCGGTTGCAGAGGGTGT GGGGATACAGGCTGCGCTCACTGGCCGCTTTACCGCTCAGGAAACCCAAACCAGCTCGACCCTCATGCGCTTTTTCCGCA CCCGTCACAAGGACGATGAAATGCGCGGCAACATGCTGACCGCGCTGGACAGCATGGTCCGCTGGGACATCATCGACCCG CAAAAGGGCCAGCGCTACGCCGGGCCGCTGGAAGCCATACTGGCGCGTAACCCGGAGGTCTCTGTCAGCCAGATAGATGC GACGTCCAGCACCCGCAACGTCGCGGCGCGTATGGCATTGCGCGTCCCGGCGGTACGTTTCAAGGATGGCGCAAGCGATG CCTCTCAAACCCTGACGCCGGAACCTTCGGTGTACGTCGAAGCGGATCGAATCAAGGAAACACGTACGGAAACCGGCGGA TTCATCAGCGTTGTCGGCGCCAAGGGTGACACTGCTCAGCAACGGGCGGGGGTCACCGCCAACCTGAACTTCGCGCCGAT TGCCAGCTCGGCCACGTCAGCAGAAAAAGGTGCCAACCATGGGGTTCAGGTTCAGGGGCTGGGTTTGCAACTGGGCATGT CCCGAGACTTGGCCTGGGCGCTGGAAAAGAACGAAATATCACCCTTCCTGATTGGCGACAAACAGGACGCCGATCTGGAC CGGCACTACTCCACGCTGCGCGACATGCAGGCCGAAATCACCGCCAACCGTGATCTGTGGTTGATGCGTTGCATCGAAAC ACTGGAGCCGGATGAGACAGGCAACAAAAACACCCCCGACAACCGCCTGCGCGCGGCTATACACCTTGACGCTTTCGAGG CGACAATCAAACGTCTGGGCAAGGACAGCAAGTATTGCCAGTACAACGTCAATTACTCGATGAAGGGCCGGGCAGGCGCC GAAATAGACGGCTATCGCGGCATTCAGGCTGTGGCTTTGCAGCGCGGGGATGTGCAGGCAGCGGAAAAGGCCCAGCAGGC CATTGACGATATTTTGCTGACCAAAGAAACCTGGCGACCACTGATGTTGATCGTTCGTGAACGGGCACGGGACTCAACCG TTGTCGGCTGGCGTAACCTGCTGCGTTGGCAGAAGCTCTCCAATATCGACGGTCAGCGCACTGCAGCGCAGTTTCCGCCG CCGTGA
Upstream 100 bases:
>100_bases CTTCAAACACGTTTACGCACCACCGAATGTGCAGTGACGATTACTACCACCACCTGTATTGATCTGTCGAACTTGATATC TGAGCCGATGGAGCCCGCTC
Downstream 100 bases:
>100_bases AAACGGGGATCGACACGCTGGTCATTCAACTGCACGACTATCGCGTCAATTCATTCCCAGCTCACGCTTTACCAGCTTCA CCAGCTGCTTGGTGTTAAGC
Product: type III effector HopAS1
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1361_residues MTLRINTRSATPVVPLETGSSSQPEVPSVTARPTEPPPVANPAAPKSAPGVQQAHGLKTRIAGKLSERQTNFSLGIPGTG RTLNRPLRSGIPEEGEHLSSEEKHDPLLKEAHELQRMVDSALTHLKAAPTSLWERPAPSTVRGITTKIFPWLKPAPLREV ASNGSNAKTKADNSKQSPETIAAAVKELSTRLDHQSKVLATATLALVAAREHLESLEQTTPPTSTERLNHARARVQQADS TTRLASQQLRELIQGTEVLQLGALSEGQDQVKQKAEFSQQWLGELRTRMQALDVRFADRHAAIEIELQLKVAETRELISL DHDMTAAEHTAAHANTQLSALRAQRQETPEGSDEADRLDTAIGQTLATRSQAMQTHQQLTKRLVRVDADVARLNDELGKI HQRIAIVNDERFALKTLDQKLPASDQVTTPAEGEAQERIDKTALKNVREQYLASQISQAHAFAATGADEIQAALQRIGDR LQGTPPPTSLPAFAVIEVITSALADVTGNDATRANRVLDVLSQHPLEHWPRVAEEMSKSVRTRSATNNSIQQDTLNLCRK LATVPRGMEMLQVLSSDGTAPIVAERAKPLRVFWNADEAQQKEPDGKVKAWLQTAKQVARSKLDGDEKSFDDVDHAAFNA VRNGYFSNAPGTPYAQHDQRLKKATMEWVMRAVAANTPEQATATAPAKSSLPRRLVPTLNKTPFAKSTLDRAYSVGESMG LQSPRKQVDQVISARISMLEETLKNAKGAPGLQLEIPAAQALLDHLKSLEKKGTHLSQVTLKNRDGKSMQSLLKARVQQQ RLSQIWDKPDANGKRAVNVLHKAQHIELPPLYSELANSKLSVYEAINRVDEHLREILPPALQPAQSVEEVLDQDLNAAIK LLKTRHLSEKSDIVTFFKPFILESRLRDRLRLGGGGTLGVGLPSLPYSLISPIVSPIFSAEKSRSDEAFAQLFMPILGME MSFGKTRTEAAEVTIGVAAGSAVAEGVGIQAALTGRFTAQETQTSSTLMRFFRTRHKDDEMRGNMLTALDSMVRWDIIDP QKGQRYAGPLEAILARNPEVSVSQIDATSSTRNVAARMALRVPAVRFKDGASDASQTLTPEPSVYVEADRIKETRTETGG FISVVGAKGDTAQQRAGVTANLNFAPIASSATSAEKGANHGVQVQGLGLQLGMSRDLAWALEKNEISPFLIGDKQDADLD RHYSTLRDMQAEITANRDLWLMRCIETLEPDETGNKNTPDNRLRAAIHLDAFEATIKRLGKDSKYCQYNVNYSMKGRAGA EIDGYRGIQAVALQRGDVQAAEKAQQAIDDILLTKETWRPLMLIVRERARDSTVVGWRNLLRWQKLSNIDGQRTAAQFPP P
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA