Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523544

Identifier: 42523544

GI number: 42523544

Start: 1977689

End: 1979587

Strand: Direct

Name: 42523544

Synonym: Bd2072

Alternate gene names: NA

Gene position: 1977689-1979587 (Clockwise)

Preceding gene: 42523543

Following gene: 42523545

Centisome position: 52.28

GC content: 49.61

Gene sequence:

>1899_bases
ATGAAATACAGATCTATTACAGCTCTGGGCCTAGTGTTTTTCGCAACGATCTGCTCGAGTGCTGCGTCATTGAACGCCGA
CTCCGAGGTCAATACGACACTGATCCGGGAGTTCCTTTCAAAAACGGAAATGCGTCTGCCACCACAAGTGATCAAGTTCG
TGGGGCCGCAGACAGTGGACTTTAAAGACATGGGCGCGCTGCCTGGGGATCTTTGCAGCAAGGATGTGAACTATAAAGAT
CTGGTTAAAAGCAGCGTTCTGAAATTCCGCAAGCGCATCTATTTGCACAAAGGACTTTTGCCATACTTGAACGGATCCAA
ATCCCCCTGCGGAAACAACAGCATTCATAACATCGCAGCTCGTGCATTGATCTTTGAAATTTCCCGCCTGTATGACCGCT
CGGACAAACACTGGGACAATGCCACCGACAAGGCCGCGCTCTCCAGTTGTGAATTTCAGCATGACACCGATCGCCAGAAC
GGCAATCTGGCTCCGATCTGCCAATACTATCTGAAAAGCTCTTACCGCGTTTCCGGATCCCCGTCTTACAAGAATCTTTC
TGACTTTAAGGGGAACCGCATTCAAAGCAAAAACGAACTGCCTGTGCGTGTGGGAAATATCAACGAGCTGGATTCGCCGG
ACGAACACTTTGCTTACAACTTCACCCAATTTTTGACGGATCCCAGCTATCAATGCCGTAAACCTTCTTTCCACACTTAC
TTCCAGCGCCTGACAGGTTTTGTCCCGTTTACAGCCGACAGCTGCGCCTCCGTCACTCATCTTTACACCAGCACCGGCGC
ATGGAAGATCGACATCGATCCGGCCAAAGTTTACGAAGTGCATTTCCTTTTTGCCTCGAAAGGTGAAGAAATGATGAGCC
GCTGGGGACATTCGATGCTGCGCCTGGTGGTGTGCGCCCCCACACGAAAAACTGTGGGACCCGAGTGTCTGGCGGATGTG
GCTTTCCATGTGGTGTTAAGCTATCGCGCCAACATTGATGATGTGATTGTGAATTACTGGGACGGTCTGACTGGAAAATA
TCCTTCCCAGATCATGACCTTTGCCATGAGTGAAGTGATTGATGAATACACCCGCGGTCAATGGCGTGATCTGATCAGTC
TGCCGCTGAAGATATCTGCCACAGAAAAGAAAATTCTGGTGGAAAGCGCCCTGGAACATTACTGGAGCTATGCCGGAGAC
TACAAATTCCTTTCCAACAACTGCGCATCCGAAACAGACCAGTTGATGCGTTCGGCTTTACCGAAAAATCATTCGTATCA
GGATACGTTTGCGGCAAGTCCTCTGGGCGTGTATCGCAATCTGAAATTGCACAATCTGGTGGATGAAAGTCTTTTGAATG
ACGAAAAGGACGCCAAACGCAAAGGCTACTTTTTCCCAAGCCAGAAAGAATCCCTGGACAGGGCCTTTAATCACATGCGT
CCGTTCTTCCTGGGCTATCGTGATTTGTCCGAGTGGGCAGAGCATTCCAAATCCTTAGAGCGCAACAAAGTCTATCAAAC
TCTTGAGACCTTCGAAGATATCGGCAACGCCTACATCCTGGAAAAATACGCCAATCTGGTACAGCAAGGACTGCAGGGAA
AACTGATCGCCCGCCTGCTTCAAGGCGACAACCGCGAAGCTGCGTTTGTGCAGATCATTGCCGGCATCAACCAAGCCTCA
CAAAACCGACTGCCATGGAAGCTGGCGATAGGGGGTTACGGAGTCCCCGTAGCGGCGGAAGTGGTTTCTGATGAAGAAGT
CATCTTGCGCCTGCAAGATGGCATCAAATGGGGTGGCGCTTACAAAGAATTGGTAATGAAAAAGTTCCCGGGCATCGACC
AGGAACTTGTTGGAATTAAACAGAACCTAGAACTACTAACAAACCGCAGGAGGTTTTAA

Upstream 100 bases:

>100_bases
CACCCCTTGGCACCCCCTTTGCTCTAAGGACACTGCTTGTGTTTTTTGGAGTCATTGTGCGACCAGCCCACTTCCGTGGA
CTTTAAGGAATGGTATTCAT

Downstream 100 bases:

>100_bases
TGAAAAAACTAGTACTGGTCTCTTTGTTGATCATGGGTATCGGCATGGAATCCGCAATGGCTCGCCCTCACCACAGACCG
CGCCCCGAGCACGGCCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MKYRSITALGLVFFATICSSAASLNADSEVNTTLIREFLSKTEMRLPPQVIKFVGPQTVDFKDMGALPGDLCSKDVNYKD
LVKSSVLKFRKRIYLHKGLLPYLNGSKSPCGNNSIHNIAARALIFEISRLYDRSDKHWDNATDKAALSSCEFQHDTDRQN
GNLAPICQYYLKSSYRVSGSPSYKNLSDFKGNRIQSKNELPVRVGNINELDSPDEHFAYNFTQFLTDPSYQCRKPSFHTY
FQRLTGFVPFTADSCASVTHLYTSTGAWKIDIDPAKVYEVHFLFASKGEEMMSRWGHSMLRLVVCAPTRKTVGPECLADV
AFHVVLSYRANIDDVIVNYWDGLTGKYPSQIMTFAMSEVIDEYTRGQWRDLISLPLKISATEKKILVESALEHYWSYAGD
YKFLSNNCASETDQLMRSALPKNHSYQDTFAASPLGVYRNLKLHNLVDESLLNDEKDAKRKGYFFPSQKESLDRAFNHMR
PFFLGYRDLSEWAEHSKSLERNKVYQTLETFEDIGNAYILEKYANLVQQGLQGKLIARLLQGDNREAAFVQIIAGINQAS
QNRLPWKLAIGGYGVPVAAEVVSDEEVILRLQDGIKWGGAYKELVMKKFPGIDQELVGIKQNLELLTNRRRF

Sequences:

>Translated_632_residues
MKYRSITALGLVFFATICSSAASLNADSEVNTTLIREFLSKTEMRLPPQVIKFVGPQTVDFKDMGALPGDLCSKDVNYKD
LVKSSVLKFRKRIYLHKGLLPYLNGSKSPCGNNSIHNIAARALIFEISRLYDRSDKHWDNATDKAALSSCEFQHDTDRQN
GNLAPICQYYLKSSYRVSGSPSYKNLSDFKGNRIQSKNELPVRVGNINELDSPDEHFAYNFTQFLTDPSYQCRKPSFHTY
FQRLTGFVPFTADSCASVTHLYTSTGAWKIDIDPAKVYEVHFLFASKGEEMMSRWGHSMLRLVVCAPTRKTVGPECLADV
AFHVVLSYRANIDDVIVNYWDGLTGKYPSQIMTFAMSEVIDEYTRGQWRDLISLPLKISATEKKILVESALEHYWSYAGD
YKFLSNNCASETDQLMRSALPKNHSYQDTFAASPLGVYRNLKLHNLVDESLLNDEKDAKRKGYFFPSQKESLDRAFNHMR
PFFLGYRDLSEWAEHSKSLERNKVYQTLETFEDIGNAYILEKYANLVQQGLQGKLIARLLQGDNREAAFVQIIAGINQAS
QNRLPWKLAIGGYGVPVAAEVVSDEEVILRLQDGIKWGGAYKELVMKKFPGIDQELVGIKQNLELLTNRRRF
>Mature_632_residues
MKYRSITALGLVFFATICSSAASLNADSEVNTTLIREFLSKTEMRLPPQVIKFVGPQTVDFKDMGALPGDLCSKDVNYKD
LVKSSVLKFRKRIYLHKGLLPYLNGSKSPCGNNSIHNIAARALIFEISRLYDRSDKHWDNATDKAALSSCEFQHDTDRQN
GNLAPICQYYLKSSYRVSGSPSYKNLSDFKGNRIQSKNELPVRVGNINELDSPDEHFAYNFTQFLTDPSYQCRKPSFHTY
FQRLTGFVPFTADSCASVTHLYTSTGAWKIDIDPAKVYEVHFLFASKGEEMMSRWGHSMLRLVVCAPTRKTVGPECLADV
AFHVVLSYRANIDDVIVNYWDGLTGKYPSQIMTFAMSEVIDEYTRGQWRDLISLPLKISATEKKILVESALEHYWSYAGD
YKFLSNNCASETDQLMRSALPKNHSYQDTFAASPLGVYRNLKLHNLVDESLLNDEKDAKRKGYFFPSQKESLDRAFNHMR
PFFLGYRDLSEWAEHSKSLERNKVYQTLETFEDIGNAYILEKYANLVQQGLQGKLIARLLQGDNREAAFVQIIAGINQAS
QNRLPWKLAIGGYGVPVAAEVVSDEEVILRLQDGIKWGGAYKELVMKKFPGIDQELVGIKQNLELLTNRRRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71820; Mature: 71820

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRSITALGLVFFATICSSAASLNADSEVNTTLIREFLSKTEMRLPPQVIKFVGPQTVD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
FKDMGALPGDLCSKDVNYKDLVKSSVLKFRKRIYLHKGLLPYLNGSKSPCGNNSIHNIAA
HHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHH
RALIFEISRLYDRSDKHWDNATDKAALSSCEFQHDTDRQNGNLAPICQYYLKSSYRVSGS
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PSYKNLSDFKGNRIQSKNELPVRVGNINELDSPDEHFAYNFTQFLTDPSYQCRKPSFHTY
CCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
FQRLTGFVPFTADSCASVTHLYTSTGAWKIDIDPAKVYEVHFLFASKGEEMMSRWGHSML
HHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHEEEEEEEECCCCHHHHHHHHHHHH
RLVVCAPTRKTVGPECLADVAFHVVLSYRANIDDVIVNYWDGLTGKYPSQIMTFAMSEVI
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
DEYTRGQWRDLISLPLKISATEKKILVESALEHYWSYAGDYKFLSNNCASETDQLMRSAL
HHHHCHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHC
PKNHSYQDTFAASPLGVYRNLKLHNLVDESLLNDEKDAKRKGYFFPSQKESLDRAFNHMR
CCCCCCCHHHCCCCHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCC
PFFLGYRDLSEWAEHSKSLERNKVYQTLETFEDIGNAYILEKYANLVQQGLQGKLIARLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
QGDNREAAFVQIIAGINQASQNRLPWKLAIGGYGVPVAAEVVSDEEVILRLQDGIKWGGA
CCCCCCHHHHHHHHHCCHHHCCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHCCCCCCHH
YKELVMKKFPGIDQELVGIKQNLELLTNRRRF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKYRSITALGLVFFATICSSAASLNADSEVNTTLIREFLSKTEMRLPPQVIKFVGPQTVD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
FKDMGALPGDLCSKDVNYKDLVKSSVLKFRKRIYLHKGLLPYLNGSKSPCGNNSIHNIAA
HHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHH
RALIFEISRLYDRSDKHWDNATDKAALSSCEFQHDTDRQNGNLAPICQYYLKSSYRVSGS
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PSYKNLSDFKGNRIQSKNELPVRVGNINELDSPDEHFAYNFTQFLTDPSYQCRKPSFHTY
CCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
FQRLTGFVPFTADSCASVTHLYTSTGAWKIDIDPAKVYEVHFLFASKGEEMMSRWGHSML
HHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHEEEEEEEECCCCHHHHHHHHHHHH
RLVVCAPTRKTVGPECLADVAFHVVLSYRANIDDVIVNYWDGLTGKYPSQIMTFAMSEVI
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
DEYTRGQWRDLISLPLKISATEKKILVESALEHYWSYAGDYKFLSNNCASETDQLMRSAL
HHHHCHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHC
PKNHSYQDTFAASPLGVYRNLKLHNLVDESLLNDEKDAKRKGYFFPSQKESLDRAFNHMR
CCCCCCCHHHCCCCHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCC
PFFLGYRDLSEWAEHSKSLERNKVYQTLETFEDIGNAYILEKYANLVQQGLQGKLIARLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
QGDNREAAFVQIIAGINQASQNRLPWKLAIGGYGVPVAAEVVSDEEVILRLQDGIKWGGA
CCCCCCHHHHHHHHHCCHHHCCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHCCCCCCHH
YKELVMKKFPGIDQELVGIKQNLELLTNRRRF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA