| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is pcaD [H]
Identifier: 42523492
GI number: 42523492
Start: 1927840
End: 1928703
Strand: Direct
Name: pcaD [H]
Synonym: Bd2017
Alternate gene names: 42523492
Gene position: 1927840-1928703 (Clockwise)
Preceding gene: 42523481
Following gene: 42523494
Centisome position: 50.96
GC content: 51.5
Gene sequence:
>864_bases ATGGCTACTTTAAAACTGCATGGACATGAGTATTACTATGAAGATCATGGCCCCAAAGACGCCCCCTGCATCGTGCTGAG TCCTCTTGTTTATACAGACACCACTGTTTATGAGCCCATCGCCCGCATCCTGGCGGATGACTATCGTGTGATCACCTATG ATCACCGCGGCTTGGGTCGCAGTGAACACACTGTCAGCCCCAGCCTGGAAAGCAGCGCCAAGGATGTGGCCGCGCTTATT GAGCAACTGGGTGTCGGACCCTGCCACTTTGTAGGGAACTGTCTGGGAGCCTATATCGGCCTTCGACTGGCCATCCATCG ATCTGACCTGTTGAAAAGCTGCACTTTGATGGGTGCGGTCGCTGAAGGTGAAAGTGACGAAACAATCAAAGCCATGGAAG GCTTTGTCGCCAATATCAAGAAAGAAGGTATGAAAGCCGGAGTCAATGACTTCGCCAAAATGTGGTTCGGAGACACTTTC CGCGCCACGAAAGATCCTATTCAAGTCAGCCGTCGTGAAAAATGGCTGAGTCATATCAAACACATGAAACCAGACGAAAT GGATTCGGCTTTGCAGATCTTCCGTCGCACCGACATGAGTGAAGACCTGAACAAAGTCCATTGTGCCGTTCTGGTTCTGG CCGGTGACGAGGATTCACCTTCCAATCTGGAAGCTTACCGCCGAATGGCGAAAGCTCTTCCGGCTGGTGAATACAAAACC ATCCACCACGCGGGCTTTGCCCTTGTGATCGAACAACCTGAAGAGGTCGCCGAAAACATCCGCACCTTCGTGGGCAAAGT GGAACGTCATCTGCAACATCAATACAAACAAGCTCCACGGGACTTTGACGCCCGTATGATGTGA
Upstream 100 bases:
>100_bases GTTAATTTGAAGCGGTTGGTCAAGGACTGATTTCGTCCAGTGGGCCTTGCGGGCCCCCACGGTGGGAGTAGGCTTTAATT GGAAGCAAAAGGGGGTCTAT
Downstream 100 bases:
>100_bases TGAAGTTGAGCTCCAAAGCCCTCTCGAAAGAGAGGGCTTTCTTATCAGATATACTTGGTGATTTCCTTGATTTCGTCCAA ATCAAGTTCCTCGTGGTTGC
Product: beta-ketoadipate enol-lactone hydrolase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase I; Beta-ketoadipate enol-lactone hydrolase I; Enol-lactone hydrolase I [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGRSEHTVSPSLESSAKDVAALI EQLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAVAEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTF RATKDPIQVSRREKWLSHIKHMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKT IHHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM
Sequences:
>Translated_287_residues MATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGRSEHTVSPSLESSAKDVAALI EQLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAVAEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTF RATKDPIQVSRREKWLSHIKHMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKT IHHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM >Mature_286_residues ATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGRSEHTVSPSLESSAKDVAALIE QLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAVAEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTFR ATKDPIQVSRREKWLSHIKHMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKTI HHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 32232; Mature: 32101
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGR CCEEEECCCEEEECCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCC SEHTVSPSLESSAKDVAALIEQLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAV CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTFRATKDPIQVSRREKWLSHIK HCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH HMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKT CCCCCHHHHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC IHHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM HHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGR CEEEECCCEEEECCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCC SEHTVSPSLESSAKDVAALIEQLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAV CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTFRATKDPIQVSRREKWLSHIK HCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH HMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKT CCCCCHHHHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC IHHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM HHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8181753 [H]