Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is pcaD [H]

Identifier: 42523492

GI number: 42523492

Start: 1927840

End: 1928703

Strand: Direct

Name: pcaD [H]

Synonym: Bd2017

Alternate gene names: 42523492

Gene position: 1927840-1928703 (Clockwise)

Preceding gene: 42523481

Following gene: 42523494

Centisome position: 50.96

GC content: 51.5

Gene sequence:

>864_bases
ATGGCTACTTTAAAACTGCATGGACATGAGTATTACTATGAAGATCATGGCCCCAAAGACGCCCCCTGCATCGTGCTGAG
TCCTCTTGTTTATACAGACACCACTGTTTATGAGCCCATCGCCCGCATCCTGGCGGATGACTATCGTGTGATCACCTATG
ATCACCGCGGCTTGGGTCGCAGTGAACACACTGTCAGCCCCAGCCTGGAAAGCAGCGCCAAGGATGTGGCCGCGCTTATT
GAGCAACTGGGTGTCGGACCCTGCCACTTTGTAGGGAACTGTCTGGGAGCCTATATCGGCCTTCGACTGGCCATCCATCG
ATCTGACCTGTTGAAAAGCTGCACTTTGATGGGTGCGGTCGCTGAAGGTGAAAGTGACGAAACAATCAAAGCCATGGAAG
GCTTTGTCGCCAATATCAAGAAAGAAGGTATGAAAGCCGGAGTCAATGACTTCGCCAAAATGTGGTTCGGAGACACTTTC
CGCGCCACGAAAGATCCTATTCAAGTCAGCCGTCGTGAAAAATGGCTGAGTCATATCAAACACATGAAACCAGACGAAAT
GGATTCGGCTTTGCAGATCTTCCGTCGCACCGACATGAGTGAAGACCTGAACAAAGTCCATTGTGCCGTTCTGGTTCTGG
CCGGTGACGAGGATTCACCTTCCAATCTGGAAGCTTACCGCCGAATGGCGAAAGCTCTTCCGGCTGGTGAATACAAAACC
ATCCACCACGCGGGCTTTGCCCTTGTGATCGAACAACCTGAAGAGGTCGCCGAAAACATCCGCACCTTCGTGGGCAAAGT
GGAACGTCATCTGCAACATCAATACAAACAAGCTCCACGGGACTTTGACGCCCGTATGATGTGA

Upstream 100 bases:

>100_bases
GTTAATTTGAAGCGGTTGGTCAAGGACTGATTTCGTCCAGTGGGCCTTGCGGGCCCCCACGGTGGGAGTAGGCTTTAATT
GGAAGCAAAAGGGGGTCTAT

Downstream 100 bases:

>100_bases
TGAAGTTGAGCTCCAAAGCCCTCTCGAAAGAGAGGGCTTTCTTATCAGATATACTTGGTGATTTCCTTGATTTCGTCCAA
ATCAAGTTCCTCGTGGTTGC

Product: beta-ketoadipate enol-lactone hydrolase

Products: NA

Alternate protein names: 3-oxoadipate enol-lactonase I; Beta-ketoadipate enol-lactone hydrolase I; Enol-lactone hydrolase I [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGRSEHTVSPSLESSAKDVAALI
EQLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAVAEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTF
RATKDPIQVSRREKWLSHIKHMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKT
IHHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM

Sequences:

>Translated_287_residues
MATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGRSEHTVSPSLESSAKDVAALI
EQLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAVAEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTF
RATKDPIQVSRREKWLSHIKHMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKT
IHHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM
>Mature_286_residues
ATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGRSEHTVSPSLESSAKDVAALIE
QLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAVAEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTFR
ATKDPIQVSRREKWLSHIKHMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKTI
HHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012790 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.24 [H]

Molecular weight: Translated: 32232; Mature: 32101

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGR
CCEEEECCCEEEECCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCC
SEHTVSPSLESSAKDVAALIEQLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAV
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTFRATKDPIQVSRREKWLSHIK
HCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
HMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKT
CCCCCHHHHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
IHHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM
HHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ATLKLHGHEYYYEDHGPKDAPCIVLSPLVYTDTTVYEPIARILADDYRVITYDHRGLGR
CEEEECCCEEEECCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCC
SEHTVSPSLESSAKDVAALIEQLGVGPCHFVGNCLGAYIGLRLAIHRSDLLKSCTLMGAV
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGESDETIKAMEGFVANIKKEGMKAGVNDFAKMWFGDTFRATKDPIQVSRREKWLSHIK
HCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
HMKPDEMDSALQIFRRTDMSEDLNKVHCAVLVLAGDEDSPSNLEAYRRMAKALPAGEYKT
CCCCCHHHHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
IHHAGFALVIEQPEEVAENIRTFVGKVERHLQHQYKQAPRDFDARMM
HHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8181753 [H]