Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523456

Identifier: 42523456

GI number: 42523456

Start: 1890213

End: 1891112

Strand: Direct

Name: 42523456

Synonym: Bd1979

Alternate gene names: NA

Gene position: 1890213-1891112 (Clockwise)

Preceding gene: 42523455

Following gene: 42523457

Centisome position: 49.97

GC content: 52.0

Gene sequence:

>900_bases
ATGATTAAAAAGCTCTGGGCTCATTGGGATCAGTTCTGGTTTGCACCGCAAAGTCTGCTGGGGCTTGCCTCTATGCGGGT
CATGTTGTGTGCGACTCTGCTGTATATGAATCTGACCCGTTTCTATAATTTGGAATTTTACACCGATTCCAGCTGGATTC
CGCGCAGTCGTGCGCTGGAAGTGATGCCGGAACTGGGGCGGCCGTTGTTCTTGTGGACGTTCTGGCCGGACAGCATGAAC
TTTGTCATGAATCTGGTGTTGGTGGTGCTGTTGGCGCTGCTGACTGTGGGGATTGGCGGCCGCTGGTTGATGTGGATTGC
CTGGATCATCAATGCCGGTTTCCTGCAAAGAAACTACGCTGTGAACTTTGGTGCGGATGTGATCGGGGCTTTGTTCCTGT
TTTATATGTCCTTCACGCAAAGCTGCGAACGTTTGAGTGTCGTGAATCTGGTGCGCAGAAAAAAGACGTTCCAACTCAGC
GACACGGTCAGCTCGATGATGATTCGCATGATGCAGGTTCAGATTTCTGTGATCTATGCTTACACCGGGTGGGAAAAACT
CAAAGGTGGCAGCTGGTGGGACGGAACCGCTTTGTGGAGTGTTCTGGCAAATCCCCAGATGACCACGATGGACTTTTCCT
TCCTGCGCCACTTCCCGTGGGTGATCCCGGTGATTGGTTATGTGACGATTCTGTTTGAGATTTATTTCCCGGCGATGGTG
GCCTGGCCCAAGACTCGTTACCTGTGTTTGTTGTTGGGACTTTCGTTCCACGCGGGGATCGGTGTGTTTATGGGGTTGAT
CCCTTTTGCCACGGTGATGGTGTCCACGTACTTCCTGTTCCTGGATCCGCAGCTTCTGGAAAAGACGCTTGAGAAAACCC
GCTCTGTGGTGCGCCTTTAA

Upstream 100 bases:

>100_bases
AGGCCGTGCGTTTCCGTGAAGACAGCGTCAGTGATCTGTCCAAAGAGGTCCAGTACATTCGGGAATCCTATTCCTGCGCG
GGTGGGGATGAGGAGAGTTT

Downstream 100 bases:

>100_bases
ATGAACAAAGCCCTGATTGGAAAAATCGTAAATGGACTGCTGGTTGTGGCAGTCTTGTGGGTTCTGATCAATCGCCTTCC
GGGTGTCATTGAAAACTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MIKKLWAHWDQFWFAPQSLLGLASMRVMLCATLLYMNLTRFYNLEFYTDSSWIPRSRALEVMPELGRPLFLWTFWPDSMN
FVMNLVLVVLLALLTVGIGGRWLMWIAWIINAGFLQRNYAVNFGADVIGALFLFYMSFTQSCERLSVVNLVRRKKTFQLS
DTVSSMMIRMMQVQISVIYAYTGWEKLKGGSWWDGTALWSVLANPQMTTMDFSFLRHFPWVIPVIGYVTILFEIYFPAMV
AWPKTRYLCLLLGLSFHAGIGVFMGLIPFATVMVSTYFLFLDPQLLEKTLEKTRSVVRL

Sequences:

>Translated_299_residues
MIKKLWAHWDQFWFAPQSLLGLASMRVMLCATLLYMNLTRFYNLEFYTDSSWIPRSRALEVMPELGRPLFLWTFWPDSMN
FVMNLVLVVLLALLTVGIGGRWLMWIAWIINAGFLQRNYAVNFGADVIGALFLFYMSFTQSCERLSVVNLVRRKKTFQLS
DTVSSMMIRMMQVQISVIYAYTGWEKLKGGSWWDGTALWSVLANPQMTTMDFSFLRHFPWVIPVIGYVTILFEIYFPAMV
AWPKTRYLCLLLGLSFHAGIGVFMGLIPFATVMVSTYFLFLDPQLLEKTLEKTRSVVRL
>Mature_299_residues
MIKKLWAHWDQFWFAPQSLLGLASMRVMLCATLLYMNLTRFYNLEFYTDSSWIPRSRALEVMPELGRPLFLWTFWPDSMN
FVMNLVLVVLLALLTVGIGGRWLMWIAWIINAGFLQRNYAVNFGADVIGALFLFYMSFTQSCERLSVVNLVRRKKTFQLS
DTVSSMMIRMMQVQISVIYAYTGWEKLKGGSWWDGTALWSVLANPQMTTMDFSFLRHFPWVIPVIGYVTILFEIYFPAMV
AWPKTRYLCLLLGLSFHAGIGVFMGLIPFATVMVSTYFLFLDPQLLEKTLEKTRSVVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34748; Mature: 34748

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKLWAHWDQFWFAPQSLLGLASMRVMLCATLLYMNLTRFYNLEFYTDSSWIPRSRALE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHH
VMPELGRPLFLWTFWPDSMNFVMNLVLVVLLALLTVGIGGRWLMWIAWIINAGFLQRNYA
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
VNFGADVIGALFLFYMSFTQSCERLSVVNLVRRKKTFQLSDTVSSMMIRMMQVQISVIYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
YTGWEKLKGGSWWDGTALWSVLANPQMTTMDFSFLRHFPWVIPVIGYVTILFEIYFPAMV
ECCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
AWPKTRYLCLLLGLSFHAGIGVFMGLIPFATVMVSTYFLFLDPQLLEKTLEKTRSVVRL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKKLWAHWDQFWFAPQSLLGLASMRVMLCATLLYMNLTRFYNLEFYTDSSWIPRSRALE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHH
VMPELGRPLFLWTFWPDSMNFVMNLVLVVLLALLTVGIGGRWLMWIAWIINAGFLQRNYA
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
VNFGADVIGALFLFYMSFTQSCERLSVVNLVRRKKTFQLSDTVSSMMIRMMQVQISVIYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
YTGWEKLKGGSWWDGTALWSVLANPQMTTMDFSFLRHFPWVIPVIGYVTILFEIYFPAMV
ECCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
AWPKTRYLCLLLGLSFHAGIGVFMGLIPFATVMVSTYFLFLDPQLLEKTLEKTRSVVRL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA