Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is potE [H]

Identifier: 42523390

GI number: 42523390

Start: 1827663

End: 1828901

Strand: Direct

Name: potE [H]

Synonym: Bd1912

Alternate gene names: 42523390

Gene position: 1827663-1828901 (Clockwise)

Preceding gene: 42523389

Following gene: 42523393

Centisome position: 48.31

GC content: 52.3

Gene sequence:

>1239_bases
ATGTTGGTTTTTTATGCCACGGGCATGATCCTTGGGGCGGGGGTGTATTCGGTGATCGGTAAGGCTGCCGGGGTAGCTCA
AGAGGGATTGTGGCTGAGTTTTATTTTGGCGGCGCTGGCGGCTGTGTTGACGGCTCTGTCCTATGCTGAACTTGCGACAC
TTTTTCCCAAGGCGGGGGCGGAATATGTTTATATGAAAGAGATCTTTCCGCAAAGAAAGATCCTTTCTTTTCTTTGTGGT
TGTCTGATGATCTTTGCCGCTATCATCACGGCTTCGACGGTGTCGCTGTCATTTGCCGCTTATACTCAGGACTTTTTCAA
GGCCCCGGAAATGCTGGTCGCCATAGTCTTGCTGGGTTTTTTCACTCTGGTGAACATCTGGGGGGTGCGCGAATCCGGAT
GGGTGAACATTGTGTTCACCCTGGTTGAGCTATCGGGGCTGGTGATATTTATTTTTGTCGGTTTACGGCAGCCCGATTTC
GGCAAAGTCCTGTCAGTTCCAGTTTCCTGGGGCGTGGTGACCGGAGCGTCTTTGATTTTTTTTGCTTACCTGGGGTTCGA
GAGCATGGTGAATCTGGCTGAAGAGGCAAAAAAGCCTGATAAGAACATTCCCCGCGCGATTTTGCTCAGTCTTTCGCTGA
CCACGGTCGTCTATGTGGCGGTCAGTCTGGCGGCGCTGGCGATGATGAGCCCCGGGGATTTGCAAAAGTCGGATGCTGTC
TTAAGTGCAGCCCTGCAAAAACATTCTCCAGAGGCGGCAAGGGCCTTGGCGGGGATTGCGTTGTTTGCCACAGCCAACAC
GGTGATGATCGCCTTGCTGGGGGCCAGTCGAATCAGTCTGGGGATGGCGCGGGGAAGGGATTTGCCGAAGGTTTTTTCCA
AAATATTACCCCAACGGCAAAGTCCGTGGCTTTCTTCGTTGTTGGTTTTTTTGCTGGCATTGTTGTTCTTGCCATTAAAG
AAAATCGAAGTGCTTGCCAGTGTTTCTTCGTTTGTGACGATCGTGGTTTTTATCATCATCAACGGAGCGGTGGTGTATCT
GCGCCGGAAAGAGCCTCAGCGAAAGCGCCCTTTTCGGGTGCCAGGGGCCGTGGCTGGATGGCCGGTGCTTCCCATACTGG
CGGCAGGTATGGCGTTATTCTTTTTGTTTAACTTTGAAGAGCAGGTGTACTACGTCGGGGTGGGGATTGTGATCTTTGTG
CTTGTGGTTTATCAGGCGCTGCATTTTCGCCGCGCCTGA

Upstream 100 bases:

>100_bases
GTATCCAACCGAGTATATCTACGGTAAAGACCGTCTGGTCATGAGCGTGAAGCAGGAAATTGAAGAGGGTTACTAGGTGA
AAAGAACTCTGGGACTTGTG

Downstream 100 bases:

>100_bases
AGGGGGCCTTACTTGGCTTTTTCTTTTTTGCAGGTTGGATAAATCGCCTGGCCTGACCAAGTTCCATCTTTGCAGGTTAA
AGTGTCAGAAATGCAGATTT

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MLVFYATGMILGAGVYSVIGKAAGVAQEGLWLSFILAALAAVLTALSYAELATLFPKAGAEYVYMKEIFPQRKILSFLCG
CLMIFAAIITASTVSLSFAAYTQDFFKAPEMLVAIVLLGFFTLVNIWGVRESGWVNIVFTLVELSGLVIFIFVGLRQPDF
GKVLSVPVSWGVVTGASLIFFAYLGFESMVNLAEEAKKPDKNIPRAILLSLSLTTVVYVAVSLAALAMMSPGDLQKSDAV
LSAALQKHSPEAARALAGIALFATANTVMIALLGASRISLGMARGRDLPKVFSKILPQRQSPWLSSLLVFLLALLFLPLK
KIEVLASVSSFVTIVVFIIINGAVVYLRRKEPQRKRPFRVPGAVAGWPVLPILAAGMALFFLFNFEEQVYYVGVGIVIFV
LVVYQALHFRRA

Sequences:

>Translated_412_residues
MLVFYATGMILGAGVYSVIGKAAGVAQEGLWLSFILAALAAVLTALSYAELATLFPKAGAEYVYMKEIFPQRKILSFLCG
CLMIFAAIITASTVSLSFAAYTQDFFKAPEMLVAIVLLGFFTLVNIWGVRESGWVNIVFTLVELSGLVIFIFVGLRQPDF
GKVLSVPVSWGVVTGASLIFFAYLGFESMVNLAEEAKKPDKNIPRAILLSLSLTTVVYVAVSLAALAMMSPGDLQKSDAV
LSAALQKHSPEAARALAGIALFATANTVMIALLGASRISLGMARGRDLPKVFSKILPQRQSPWLSSLLVFLLALLFLPLK
KIEVLASVSSFVTIVVFIIINGAVVYLRRKEPQRKRPFRVPGAVAGWPVLPILAAGMALFFLFNFEEQVYYVGVGIVIFV
LVVYQALHFRRA
>Mature_412_residues
MLVFYATGMILGAGVYSVIGKAAGVAQEGLWLSFILAALAAVLTALSYAELATLFPKAGAEYVYMKEIFPQRKILSFLCG
CLMIFAAIITASTVSLSFAAYTQDFFKAPEMLVAIVLLGFFTLVNIWGVRESGWVNIVFTLVELSGLVIFIFVGLRQPDF
GKVLSVPVSWGVVTGASLIFFAYLGFESMVNLAEEAKKPDKNIPRAILLSLSLTTVVYVAVSLAALAMMSPGDLQKSDAV
LSAALQKHSPEAARALAGIALFATANTVMIALLGASRISLGMARGRDLPKVFSKILPQRQSPWLSSLLVFLLALLFLPLK
KIEVLASVSSFVTIVVFIIINGAVVYLRRKEPQRKRPFRVPGAVAGWPVLPILAAGMALFFLFNFEEQVYYVGVGIVIFV
LVVYQALHFRRA

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI33286428, Length=387, Percent_Identity=28.4237726098191, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI258645169, Length=402, Percent_Identity=26.1194029850746, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI4507047, Length=405, Percent_Identity=27.1604938271605, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI258614005, Length=402, Percent_Identity=25.6218905472637, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI258614003, Length=402, Percent_Identity=25.6218905472637, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI7657683, Length=336, Percent_Identity=27.0833333333333, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI186910308, Length=383, Percent_Identity=26.6318537859008, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI186910306, Length=383, Percent_Identity=26.6318537859008, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI186910304, Length=383, Percent_Identity=26.6318537859008, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI115648063, Length=381, Percent_Identity=27.0341207349081, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI115648022, Length=381, Percent_Identity=27.0341207349081, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI71999149, Length=357, Percent_Identity=26.0504201680672, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI187423910, Length=393, Percent_Identity=24.6819338422392, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI7657591, Length=393, Percent_Identity=24.6819338422392, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI110347453, Length=337, Percent_Identity=27.5964391691395, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI114326544, Length=401, Percent_Identity=25.6857855361596, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI114326550, Length=401, Percent_Identity=25.6857855361596, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI71979932, Length=397, Percent_Identity=29.2191435768262, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI181337167, Length=381, Percent_Identity=25.7217847769029, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI33286430, Length=209, Percent_Identity=28.7081339712919, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI9790235, Length=292, Percent_Identity=26.7123287671233, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1786694, Length=369, Percent_Identity=26.0162601626016, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI87081869, Length=366, Percent_Identity=27.0491803278689, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786602, Length=206, Percent_Identity=31.0679611650485, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082250, Length=386, Percent_Identity=25.6476683937824, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87082023, Length=372, Percent_Identity=24.4623655913978, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17532491, Length=385, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17533459, Length=392, Percent_Identity=29.0816326530612, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI32566699, Length=411, Percent_Identity=28.4671532846715, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17531343, Length=389, Percent_Identity=26.4781491002571, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17540018, Length=383, Percent_Identity=26.6318537859008, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17568033, Length=380, Percent_Identity=27.8947368421053, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI193208714, Length=391, Percent_Identity=24.2966751918159, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI32566695, Length=391, Percent_Identity=24.2966751918159, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71982612, Length=360, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71982608, Length=360, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24667468, Length=396, Percent_Identity=31.3131313131313, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24651635, Length=370, Percent_Identity=29.1891891891892, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24651633, Length=370, Percent_Identity=29.1891891891892, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI21357367, Length=383, Percent_Identity=26.8929503916449, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI221331183, Length=427, Percent_Identity=27.1662763466042, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17647653, Length=427, Percent_Identity=27.1662763466042, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24664379, Length=427, Percent_Identity=27.1662763466042, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI221512776, Length=386, Percent_Identity=25.6476683937824, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666159, Length=386, Percent_Identity=25.6476683937824, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI45550968, Length=432, Percent_Identity=28.0092592592593, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI19921172, Length=432, Percent_Identity=28.0092592592593, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24668806, Length=385, Percent_Identity=25.7142857142857, Blast_Score=101, Evalue=8e-22,
Organism=Drosophila melanogaster, GI21356285, Length=385, Percent_Identity=25.7142857142857, Blast_Score=101, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24668802, Length=385, Percent_Identity=25.7142857142857, Blast_Score=101, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24641993, Length=381, Percent_Identity=26.246719160105, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24641995, Length=381, Percent_Identity=26.246719160105, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161077963, Length=370, Percent_Identity=27.5675675675676, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI281366235, Length=382, Percent_Identity=26.9633507853403, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI116007820, Length=382, Percent_Identity=26.9633507853403, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 44651; Mature: 44651

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]