| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523364
Identifier: 42523364
GI number: 42523364
Start: 1805901
End: 1806380
Strand: Direct
Name: 42523364
Synonym: Bd1884
Alternate gene names: NA
Gene position: 1805901-1806380 (Clockwise)
Preceding gene: 42523363
Following gene: 42523366
Centisome position: 47.74
GC content: 54.17
Gene sequence:
>480_bases ATGACGGAGTTAGTAACTTGTGTTTGGTTCGATCACGGCGAGGCCAGCAAAGCCGCGGCTTTTTATGCAAAGACATTCCC GAATAGTGAAGTGGGGCGCGTAAATACAGCTCCCGGTGATTTTCCCGGCGGCAAGAAGGGCACGGAACTGACGGTGGAAT TCACCGTGCTGGGCCGCAAGTTTGTGGGTCTGAATGGCGGCCCGGTTTTCAAGCCCAATGAGTCCGTCAGTTTTATGGTC ATCACTGAAAGTCAGGAAGAGACCGATCGCTATTGGAACGCCATTCTGGAAAACGGCGGGATTGAAAGTGCCTGTGGATG GTGCAAGGATCGCTGGGGCTTTTCATGGCAGATCACGCCCCGGATTCTGCTGGAGCTGACAACGAGTTCTGACAGTGCAA AGGCCCAGCGGGCTTTCGAGTCCATGATGACAATGACCAAGATCGACATCGCCACTCTTGAGGCGGCTGTGCGAAAGTGA
Upstream 100 bases:
>100_bases TCATGCTGCGTTTTCGCGTGGTCGTGGGGCTTGGGGTTGTCGGTTTGGTTCTGGTTCTATTTAAGATGTGAAAAATAAAT CACGTATCAAGGAGAGTTCC
Downstream 100 bases:
>100_bases ACCTTTAAGCTTGATAAAAAAAGGCGCAGTCTCCTGCGCCTTTTTTTTAGTGTGGTTGTACGTCGGTCATTTCAAAGAAG CTTGTTGAAAGTGCGAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; 3-Demethylubiquinone-9 3-Methyltransferase Family
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTELVTCVWFDHGEASKAAAFYAKTFPNSEVGRVNTAPGDFPGGKKGTELTVEFTVLGRKFVGLNGGPVFKPNESVSFMV ITESQEETDRYWNAILENGGIESACGWCKDRWGFSWQITPRILLELTTSSDSAKAQRAFESMMTMTKIDIATLEAAVRK
Sequences:
>Translated_159_residues MTELVTCVWFDHGEASKAAAFYAKTFPNSEVGRVNTAPGDFPGGKKGTELTVEFTVLGRKFVGLNGGPVFKPNESVSFMV ITESQEETDRYWNAILENGGIESACGWCKDRWGFSWQITPRILLELTTSSDSAKAQRAFESMMTMTKIDIATLEAAVRK >Mature_158_residues TELVTCVWFDHGEASKAAAFYAKTFPNSEVGRVNTAPGDFPGGKKGTELTVEFTVLGRKFVGLNGGPVFKPNESVSFMVI TESQEETDRYWNAILENGGIESACGWCKDRWGFSWQITPRILLELTTSSDSAKAQRAFESMMTMTKIDIATLEAAVRK
Specific function: Unknown
COG id: COG3865
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17544; Mature: 17413
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELVTCVWFDHGEASKAAAFYAKTFPNSEVGRVNTAPGDFPGGKKGTELTVEFTVLGRK CCCEEEEEEECCCCCCCHHEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECEE FVGLNGGPVFKPNESVSFMVITESQEETDRYWNAILENGGIESACGWCKDRWGFSWQITP EECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECC RILLELTTSSDSAKAQRAFESMMTMTKIDIATLEAAVRK EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TELVTCVWFDHGEASKAAAFYAKTFPNSEVGRVNTAPGDFPGGKKGTELTVEFTVLGRK CCEEEEEEECCCCCCCHHEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECEE FVGLNGGPVFKPNESVSFMVITESQEETDRYWNAILENGGIESACGWCKDRWGFSWQITP EECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECC RILLELTTSSDSAKAQRAFESMMTMTKIDIATLEAAVRK EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA