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The map label for this gene is ybhR [H]

Identifier: 42523359

GI number: 42523359

Start: 1803494

End: 1804570

Strand: Direct

Name: ybhR [H]

Synonym: Bd1879

Alternate gene names: 42523359

Gene position: 1803494-1804570 (Clockwise)

Preceding gene: 42523358

Following gene: 42523362

Centisome position: 47.67

GC content: 52.09

Gene sequence:

>1077_bases
TTGAAGACGCTGCTGGGTTTTATTAAAAAAGAATTTCGGCAAACCTTGCGTGACCCACGAATGCGCATTCTGCTTTTTCT
GGCCCCTTGTGTGCAACTGACGATTTTTGGTGTGGCCTTATCCACAGAGGCCAATAACATCCGGCTGAGTCTGGTGGGGG
CTCCGAACGATTCTTCGCTGCAGGAGTTGCATCGTAAAGCTCTGGCGTCGGGGTGGTTTGTTCCTGCAAAACCCAGCTTG
AGTGATCCCTATGAACAGATTCAAAAAGGGCAGGCTGATGCTGTTTTGATTGCGCCCACAGGAGGTCTGGATCGGGCCTT
GGGGCGTAAAGAGGGGGAAGTGCAGCTTTTGATCAACGCGACCAATGTCACCCGCGCGCAGGGCATTGAGCGCTATATGG
GAAGTATTTTGCGATCGTTGCATCCACAGGATCCGCCGCTGCAGTTTGATGTGCGTGTGCTTTATAATCCCGCAATGCGC
TCGGCGCTGTTTTTGGTGCCGGGGGTGATGAGCATGCTGGTGTGCCTGATCACAATTTTGCTGACCAGCATGTCTATCGC
CAAGGAAAAGGAGCTGGGCACTTTTGAAACCTTGATTTCCGCCCCGGTGTCGCCTGAGGAAGTGATTCTGGGTAAGACGG
TCCCTTTTGTGCTTTTGGGTTTAAGTAACATTCCGCTGATTGTGGGGGTGGCGGTGGTGTTGTTTGGTATGCCCATGCGC
GGAAGTCTTTGGATGTTGCTGTTGGCGGCTGTCGCGTTTGTGTGTTGCACCGTGGGAATTGGGCTGTTCATATCGACCGT
CGCAAAAAATCAGCAGCAGTCAATGATGGGCGGATTTTTGTATCTGTTTCCATCGGTGCTGCTGTCGGGAATGGTCTTTC
CGGTTGAAAATATGCCCTGGGCGCTGCGGATTTTTTCTTATATCAATCCGCTGACTTATTTCATTGAACTCTTGCGAAAC
ATAATGCTTAAGGGCGGGGACCTGCGCCTGATCGCGGTGAATGTTCTGATACTTGTGGCGATGGCTGTCCTGGCCATCAC
CGCAAGCTGGCGCCGGTTTAAAACGACGCTGTCATAG

Upstream 100 bases:

>100_bases
CCGGTTTCTTCAGCATCCTGCCATCATTTCTGGCCTTGTGCGGGTTGTTTGTTTTGATGATCACTCTGGCGACAAAAAAG
TTTAAACGGGATGTGGAGCC

Downstream 100 bases:

>100_bases
GATGTTGTCCAGCGCCCGGCTGTGGCCGTGACAGGGTCGACAGGCGCTCTAGATCCAACTCGATCACATCCAGCGTGCCG
TAGCTGTCTGCGCGCAAGTG

Product: ABC-type multidrug transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKTLLGFIKKEFRQTLRDPRMRILLFLAPCVQLTIFGVALSTEANNIRLSLVGAPNDSSLQELHRKALASGWFVPAKPSL
SDPYEQIQKGQADAVLIAPTGGLDRALGRKEGEVQLLINATNVTRAQGIERYMGSILRSLHPQDPPLQFDVRVLYNPAMR
SALFLVPGVMSMLVCLITILLTSMSIAKEKELGTFETLISAPVSPEEVILGKTVPFVLLGLSNIPLIVGVAVVLFGMPMR
GSLWMLLLAAVAFVCCTVGIGLFISTVAKNQQQSMMGGFLYLFPSVLLSGMVFPVENMPWALRIFSYINPLTYFIELLRN
IMLKGGDLRLIAVNVLILVAMAVLAITASWRRFKTTLS

Sequences:

>Translated_358_residues
MKTLLGFIKKEFRQTLRDPRMRILLFLAPCVQLTIFGVALSTEANNIRLSLVGAPNDSSLQELHRKALASGWFVPAKPSL
SDPYEQIQKGQADAVLIAPTGGLDRALGRKEGEVQLLINATNVTRAQGIERYMGSILRSLHPQDPPLQFDVRVLYNPAMR
SALFLVPGVMSMLVCLITILLTSMSIAKEKELGTFETLISAPVSPEEVILGKTVPFVLLGLSNIPLIVGVAVVLFGMPMR
GSLWMLLLAAVAFVCCTVGIGLFISTVAKNQQQSMMGGFLYLFPSVLLSGMVFPVENMPWALRIFSYINPLTYFIELLRN
IMLKGGDLRLIAVNVLILVAMAVLAITASWRRFKTTLS
>Mature_358_residues
MKTLLGFIKKEFRQTLRDPRMRILLFLAPCVQLTIFGVALSTEANNIRLSLVGAPNDSSLQELHRKALASGWFVPAKPSL
SDPYEQIQKGQADAVLIAPTGGLDRALGRKEGEVQLLINATNVTRAQGIERYMGSILRSLHPQDPPLQFDVRVLYNPAMR
SALFLVPGVMSMLVCLITILLTSMSIAKEKELGTFETLISAPVSPEEVILGKTVPFVLLGLSNIPLIVGVAVVLFGMPMR
GSLWMLLLAAVAFVCCTVGIGLFISTVAKNQQQSMMGGFLYLFPSVLLSGMVFPVENMPWALRIFSYINPLTYFIELLRN
IMLKGGDLRLIAVNVLILVAMAVLAITASWRRFKTTLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=363, Percent_Identity=27.2727272727273, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787011, Length=370, Percent_Identity=29.1891891891892, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI48994943, Length=345, Percent_Identity=27.8260869565217, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI226510979, Length=364, Percent_Identity=26.0989010989011, Blast_Score=101, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24650855, Length=359, Percent_Identity=23.6768802228412, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24650853, Length=359, Percent_Identity=23.6768802228412, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 39293; Mature: 39293

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLLGFIKKEFRQTLRDPRMRILLFLAPCVQLTIFGVALSTEANNIRLSLVGAPNDSSL
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCHHH
QELHRKALASGWFVPAKPSLSDPYEQIQKGQADAVLIAPTGGLDRALGRKEGEVQLLINA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCEEEEEEE
TNVTRAQGIERYMGSILRSLHPQDPPLQFDVRVLYNPAMRSALFLVPGVMSMLVCLITIL
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHEEECHHHHHHHHHHHHHHHHHHHHHHHH
LTSMSIAKEKELGTFETLISAPVSPEEVILGKTVPFVLLGLSNIPLIVGVAVVLFGMPMR
HHHHHHHHHHCCHHHHHHHCCCCCHHHEEECCHHHHHHHCCCCCHHHHHHHHHHHCCCCC
GSLWMLLLAAVAFVCCTVGIGLFISTVAKNQQQSMMGGFLYLFPSVLLSGMVFPVENMPW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
ALRIFSYINPLTYFIELLRNIMLKGGDLRLIAVNVLILVAMAVLAITASWRRFKTTLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTLLGFIKKEFRQTLRDPRMRILLFLAPCVQLTIFGVALSTEANNIRLSLVGAPNDSSL
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCHHH
QELHRKALASGWFVPAKPSLSDPYEQIQKGQADAVLIAPTGGLDRALGRKEGEVQLLINA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCEEEEEEE
TNVTRAQGIERYMGSILRSLHPQDPPLQFDVRVLYNPAMRSALFLVPGVMSMLVCLITIL
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHEEECHHHHHHHHHHHHHHHHHHHHHHHH
LTSMSIAKEKELGTFETLISAPVSPEEVILGKTVPFVLLGLSNIPLIVGVAVVLFGMPMR
HHHHHHHHHHCCHHHHHHHCCCCCHHHEEECCHHHHHHHCCCCCHHHHHHHHHHHCCCCC
GSLWMLLLAAVAFVCCTVGIGLFISTVAKNQQQSMMGGFLYLFPSVLLSGMVFPVENMPW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
ALRIFSYINPLTYFIELLRNIMLKGGDLRLIAVNVLILVAMAVLAITASWRRFKTTLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]