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The map label for this gene is ybhS [H]

Identifier: 42523358

GI number: 42523358

Start: 1802391

End: 1803497

Strand: Direct

Name: ybhS [H]

Synonym: Bd1878

Alternate gene names: 42523358

Gene position: 1802391-1803497 (Clockwise)

Preceding gene: 42523357

Following gene: 42523359

Centisome position: 47.65

GC content: 50.14

Gene sequence:

>1107_bases
ATGAAACTTCGGGCGATAATGGCCATTGCACAAAAAGAGGTTTTTCACATTGTGCGCGACCCTTTCACATTGGCTTTGGC
GCTGGGAATGCCGGTGATCATGGTTTTGTTTTTTGGATTTGCCATCGAATTCAATATGGAGCGGATTTCGCTGGCGGTGC
ATGATTCCAGCAAGACTCAGAACTCGTGGCTTTTGCAAAGGATCTTTACCAGTTCCGGGTACTTTCGTTCACACGCGGTG
TTTAGTCCCGCTGAAGCCCAGCAGGCCTTGGATGAGGGGCGTGCGCATGCCGCCTTGTTGATTCCACCAGGCTATGCGCG
GGATTTGAAACCGTTTCAGGAAAGTGCGGTGCAGATTCTGGTGGATGGAGCTGACAATTCATCGGCGGGCTCCATTCTGG
GGTATCTGGGAGGCATTCAAAAAAGTGCGAACCGGGCCGAGTTTGGAGCCTTCCGTGAACCGATAGAACTTAAGACGCGT
TTTTTGTTTAATCCGGAACTTAACAGCCGCTGGTTTGTGGTGCCGGGTCTGGCGGCGGCAATCATCGCGATTCTTTCCAT
TTTGCTGACGGCACTGACTGTGGCGCGGGAATGGGAAAATGGCTCGATGGAACTATTGCTTTCCACGCCGGTCAGTCCCG
TGGAAATCATTCTGGGAAAACTTCTGCCTTATTCACTGATGGGCCTTGTGGCGGTGCTTTTTGTTTTCCTGATGTCGCAA
GTGGTGTTTTCGGTGCCCTTTCGCGGGAATTTTCTGTTGTATCTGCTGGCGTGTTTGATTTTTCTTTCCACTTATCTGGC
GCAGGGTTTGTTGATTTCAGTCATCACCCGCAAGCAGCAGATGAGCATGCAGTTTGCGATGCTTTCAGGGTTGCTGCCAA
CAATTCTGCTGTCGGGATTTATTTTTCCGGTCGAGCACATGCCGAAGTTTTTCTTTTATTTTACCATGCTTTTACCGGCC
CGGTGGTTCATTGAAATCAGCCGGGCGTTGTTTTTACAAGGGGCCGGTTTCTTCAGCATCCTGCCATCATTTCTGGCCTT
GTGCGGGTTGTTTGTTTTGATGATCACTCTGGCGACAAAAAAGTTTAAACGGGATGTGGAGCCTTGA

Upstream 100 bases:

>100_bases
CCCTGGAAGCCCCGGAGGGTCTGAAAAGAAAGAACTTCCCGGATCGTGATCCCCGTGATGTCAGTCTGGAGGAGGTCTTT
ATCGCAGAGGTGGAGGGGCA

Downstream 100 bases:

>100_bases
AGACGCTGCTGGGTTTTATTAAAAAAGAATTTCGGCAAACCTTGCGTGACCCACGAATGCGCATTCTGCTTTTTCTGGCC
CCTTGTGTGCAACTGACGAT

Product: ABC-type multidrug transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKLRAIMAIAQKEVFHIVRDPFTLALALGMPVIMVLFFGFAIEFNMERISLAVHDSSKTQNSWLLQRIFTSSGYFRSHAV
FSPAEAQQALDEGRAHAALLIPPGYARDLKPFQESAVQILVDGADNSSAGSILGYLGGIQKSANRAEFGAFREPIELKTR
FLFNPELNSRWFVVPGLAAAIIAILSILLTALTVAREWENGSMELLLSTPVSPVEIILGKLLPYSLMGLVAVLFVFLMSQ
VVFSVPFRGNFLLYLLACLIFLSTYLAQGLLISVITRKQQMSMQFAMLSGLLPTILLSGFIFPVEHMPKFFFYFTMLLPA
RWFIEISRALFLQGAGFFSILPSFLALCGLFVLMITLATKKFKRDVEP

Sequences:

>Translated_368_residues
MKLRAIMAIAQKEVFHIVRDPFTLALALGMPVIMVLFFGFAIEFNMERISLAVHDSSKTQNSWLLQRIFTSSGYFRSHAV
FSPAEAQQALDEGRAHAALLIPPGYARDLKPFQESAVQILVDGADNSSAGSILGYLGGIQKSANRAEFGAFREPIELKTR
FLFNPELNSRWFVVPGLAAAIIAILSILLTALTVAREWENGSMELLLSTPVSPVEIILGKLLPYSLMGLVAVLFVFLMSQ
VVFSVPFRGNFLLYLLACLIFLSTYLAQGLLISVITRKQQMSMQFAMLSGLLPTILLSGFIFPVEHMPKFFFYFTMLLPA
RWFIEISRALFLQGAGFFSILPSFLALCGLFVLMITLATKKFKRDVEP
>Mature_368_residues
MKLRAIMAIAQKEVFHIVRDPFTLALALGMPVIMVLFFGFAIEFNMERISLAVHDSSKTQNSWLLQRIFTSSGYFRSHAV
FSPAEAQQALDEGRAHAALLIPPGYARDLKPFQESAVQILVDGADNSSAGSILGYLGGIQKSANRAEFGAFREPIELKTR
FLFNPELNSRWFVVPGLAAAIIAILSILLTALTVAREWENGSMELLLSTPVSPVEIILGKLLPYSLMGLVAVLFVFLMSQ
VVFSVPFRGNFLLYLLACLIFLSTYLAQGLLISVITRKQQMSMQFAMLSGLLPTILLSGFIFPVEHMPKFFFYFTMLLPA
RWFIEISRALFLQGAGFFSILPSFLALCGLFVLMITLATKKFKRDVEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=336, Percent_Identity=33.9285714285714, Blast_Score=207, Evalue=8e-55,
Organism=Escherichia coli, GI1787010, Length=359, Percent_Identity=29.2479108635098, Blast_Score=162, Evalue=4e-41,
Organism=Escherichia coli, GI48994943, Length=338, Percent_Identity=29.8816568047337, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI226510979, Length=333, Percent_Identity=30.03003003003, Blast_Score=124, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24650855, Length=375, Percent_Identity=23.4666666666667, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24650853, Length=375, Percent_Identity=23.4666666666667, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI85725260, Length=406, Percent_Identity=22.4137931034483, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85725262, Length=406, Percent_Identity=22.4137931034483, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40970; Mature: 40970

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRAIMAIAQKEVFHIVRDPFTLALALGMPVIMVLFFGFAIEFNMERISLAVHDSSKTQ
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECHHHEEEEEECCCCCH
NSWLLQRIFTSSGYFRSHAVFSPAEAQQALDEGRAHAALLIPPGYARDLKPFQESAVQIL
HHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHEEE
VDGADNSSAGSILGYLGGIQKSANRAEFGAFREPIELKTRFLFNPELNSRWFVVPGLAAA
EECCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHEEECCCCCCCEEECCCHHHH
IIAILSILLTALTVAREWENGSMELLLSTPVSPVEIILGKLLPYSLMGLVAVLFVFLMSQ
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFSVPFRGNFLLYLLACLIFLSTYLAQGLLISVITRKQQMSMQFAMLSGLLPTILLSGF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFPVEHMPKFFFYFTMLLPARWFIEISRALFLQGAGFFSILPSFLALCGLFVLMITLATK
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KFKRDVEP
HHHCCCCC
>Mature Secondary Structure
MKLRAIMAIAQKEVFHIVRDPFTLALALGMPVIMVLFFGFAIEFNMERISLAVHDSSKTQ
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECHHHEEEEEECCCCCH
NSWLLQRIFTSSGYFRSHAVFSPAEAQQALDEGRAHAALLIPPGYARDLKPFQESAVQIL
HHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHEEE
VDGADNSSAGSILGYLGGIQKSANRAEFGAFREPIELKTRFLFNPELNSRWFVVPGLAAA
EECCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHEEECCCCCCCEEECCCHHHH
IIAILSILLTALTVAREWENGSMELLLSTPVSPVEIILGKLLPYSLMGLVAVLFVFLMSQ
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFSVPFRGNFLLYLLACLIFLSTYLAQGLLISVITRKQQMSMQFAMLSGLLPTILLSGF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFPVEHMPKFFFYFTMLLPARWFIEISRALFLQGAGFFSILPSFLALCGLFVLMITLATK
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KFKRDVEP
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]