| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523295
Identifier: 42523295
GI number: 42523295
Start: 1736934
End: 1738022
Strand: Direct
Name: 42523295
Synonym: Bd1809
Alternate gene names: NA
Gene position: 1736934-1738022 (Clockwise)
Preceding gene: 42523294
Following gene: 42523300
Centisome position: 45.91
GC content: 48.39
Gene sequence:
>1089_bases ATGAAATATTTCAATAAACTCGGAACAACGGGCAAAGTGATTTTGGGTGTGGTGTTGCTGCTGGTTGTGGCGCGGGCATT CCTGCCTGCGGGGATGAAGTACGGCATCAACTGGTATCTTGGCAATAAAATGGAAAACTATGAAGGCCGCATCGACGATT TTGATCTGACCCTGTATCGCGGGGCCTATCAGATCGAAGGTCTGAAGATCTGGAAGAAAGGAGCCAACCCCGAGCAGCCC TTGATCTCGGCCGAACAGCTGGATCTTTCCATCGCTTGGCGGGCCCTGCTGAAAAAAGAATTTCTGGGGGATCTTTCCGT TCAAAGAGCCAAAATTGTTTTAAGCGACAGCAAGGATGAAAAGAAAGAGGATCTGGGGCAGGGGCAGGACTGGCGTGCAG TTTTTAAGAAACTGATTCCCCTGCGACTTGAATCCGTGAAAGTTGCTGACAGTTCATTTAACTTTGTAAATCGGGATTTT AAAGTGCCGGTGGATGTGCGTCTGGATCGTATCGAAGGGCGTGTTGATAATATCCGCAATACTGATGAAAACAAAGATCC TCTGCCCACCCGGGCCTCGGTGGTTGCGCGGATGCAGGGGCATGCCGATGTAAAGGGTCAGGCTCGTTTGAATCTACTTT CGAAAGTGCCCACCTTCGATACTGATGCCCAGTTACAGAATTTGAAACTGGAAACACTGAATGAATTTTTTATCGCTTAT GGCCCTTTTACCTTCAACAGGGGGCAATTCAGTTTGTATATGGAAAGTGTCAGTCGCGACGGACGCATCAAGGGTTACGC CAAACCGTTTATCAAGGATCTGGATGTCATTGATGACAAGGAGTCTTTTAAAAGCATGGGACAGGCGTTTAACGAAGTGG GTCTAGCCTTGGTGAATCTGATTTTGCGCGACGGGGACAGCAAGTCCCTGGGGGCCAGGATTGAATTTGAAGGAGCTTCC AAAGCACCCAGCATTGATAAATGGGGTGCTTTTTGGTCCTCAGTTCAAAACGGATTTTTTGAGTCGATCCACCAGAGCCT TGAGCACTCCATCTCTCCCAAAGACCTGAAGAAAGAGAAGTCGCCCTAA
Upstream 100 bases:
>100_bases AGTAATGTCTTTCCTCAAAAACGGGGACAGATCCTTTTTCATTCTTTGGGGTGGGCTCATAATGGTGTTTTGGATCTGGC CCCGTGATTGGAGGTTCGCA
Downstream 100 bases:
>100_bases TAGTGGAAGCTCATGCGGTCGGCAATAGCCTTCGGCAAAGGCGGCACCTGAGAACGCGGGATGAAGAACGTGGTCAGGTT GAAGAAGTCGCCAAAGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKYFNKLGTTGKVILGVVLLLVVARAFLPAGMKYGINWYLGNKMENYEGRIDDFDLTLYRGAYQIEGLKIWKKGANPEQP LISAEQLDLSIAWRALLKKEFLGDLSVQRAKIVLSDSKDEKKEDLGQGQDWRAVFKKLIPLRLESVKVADSSFNFVNRDF KVPVDVRLDRIEGRVDNIRNTDENKDPLPTRASVVARMQGHADVKGQARLNLLSKVPTFDTDAQLQNLKLETLNEFFIAY GPFTFNRGQFSLYMESVSRDGRIKGYAKPFIKDLDVIDDKESFKSMGQAFNEVGLALVNLILRDGDSKSLGARIEFEGAS KAPSIDKWGAFWSSVQNGFFESIHQSLEHSISPKDLKKEKSP
Sequences:
>Translated_362_residues MKYFNKLGTTGKVILGVVLLLVVARAFLPAGMKYGINWYLGNKMENYEGRIDDFDLTLYRGAYQIEGLKIWKKGANPEQP LISAEQLDLSIAWRALLKKEFLGDLSVQRAKIVLSDSKDEKKEDLGQGQDWRAVFKKLIPLRLESVKVADSSFNFVNRDF KVPVDVRLDRIEGRVDNIRNTDENKDPLPTRASVVARMQGHADVKGQARLNLLSKVPTFDTDAQLQNLKLETLNEFFIAY GPFTFNRGQFSLYMESVSRDGRIKGYAKPFIKDLDVIDDKESFKSMGQAFNEVGLALVNLILRDGDSKSLGARIEFEGAS KAPSIDKWGAFWSSVQNGFFESIHQSLEHSISPKDLKKEKSP >Mature_362_residues MKYFNKLGTTGKVILGVVLLLVVARAFLPAGMKYGINWYLGNKMENYEGRIDDFDLTLYRGAYQIEGLKIWKKGANPEQP LISAEQLDLSIAWRALLKKEFLGDLSVQRAKIVLSDSKDEKKEDLGQGQDWRAVFKKLIPLRLESVKVADSSFNFVNRDF KVPVDVRLDRIEGRVDNIRNTDENKDPLPTRASVVARMQGHADVKGQARLNLLSKVPTFDTDAQLQNLKLETLNEFFIAY GPFTFNRGQFSLYMESVSRDGRIKGYAKPFIKDLDVIDDKESFKSMGQAFNEVGLALVNLILRDGDSKSLGARIEFEGAS KAPSIDKWGAFWSSVQNGFFESIHQSLEHSISPKDLKKEKSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40894; Mature: 40894
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFNKLGTTGKVILGVVLLLVVARAFLPAGMKYGINWYLGNKMENYEGRIDDFDLTLYR CCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCCCCCCCCCEEEEEC GAYQIEGLKIWKKGANPEQPLISAEQLDLSIAWRALLKKEFLGDLSVQRAKIVLSDSKDE CCEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCH KKEDLGQGQDWRAVFKKLIPLRLESVKVADSSFNFVNRDFKVPVDVRLDRIEGRVDNIRN HHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHEEHHHHCCHHHHCCC TDENKDPLPTRASVVARMQGHADVKGQARLNLLSKVPTFDTDAQLQNLKLETLNEFFIAY CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEE GPFTFNRGQFSLYMESVSRDGRIKGYAKPFIKDLDVIDDKESFKSMGQAFNEVGLALVNL CCEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ILRDGDSKSLGARIEFEGASKAPSIDKWGAFWSSVQNGFFESIHQSLEHSISPKDLKKEK HHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC SP CC >Mature Secondary Structure MKYFNKLGTTGKVILGVVLLLVVARAFLPAGMKYGINWYLGNKMENYEGRIDDFDLTLYR CCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCCCCCCCCCEEEEEC GAYQIEGLKIWKKGANPEQPLISAEQLDLSIAWRALLKKEFLGDLSVQRAKIVLSDSKDE CCEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCH KKEDLGQGQDWRAVFKKLIPLRLESVKVADSSFNFVNRDFKVPVDVRLDRIEGRVDNIRN HHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHEEHHHHCCHHHHCCC TDENKDPLPTRASVVARMQGHADVKGQARLNLLSKVPTFDTDAQLQNLKLETLNEFFIAY CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEE GPFTFNRGQFSLYMESVSRDGRIKGYAKPFIKDLDVIDDKESFKSMGQAFNEVGLALVNL CCEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ILRDGDSKSLGARIEFEGASKAPSIDKWGAFWSSVQNGFFESIHQSLEHSISPKDLKKEK HHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC SP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA