Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523285

Identifier: 42523285

GI number: 42523285

Start: 1722732

End: 1724189

Strand: Direct

Name: 42523285

Synonym: Bd1797

Alternate gene names: NA

Gene position: 1722732-1724189 (Clockwise)

Preceding gene: 42523284

Following gene: 42523286

Centisome position: 45.54

GC content: 53.77

Gene sequence:

>1458_bases
ATGAAAAAGGGCGCCCTTTTAGGACTTCTGCTCGGACTTCTGGTCGGCCTATGGCAACCGCAAGCGCTGGCGATGAATCT
TCAGGAATATCTTCAGGCTGTCATCAACAAGAACAAATCCATTCAGGCTTTTGATGTTTCCAAAGAGGCGGCGGAAGACC
GTCGTGTCTCCGGTGACATTGAACTGGTCCCGGTTTTCACTGCGGGAGTGGGCTATCTGAATGACAAAAGCCCGTTGGGT
CAGTTTGCGCAACTGGGGGGAACTCAGACCACCGCCACGGATTTGAAGCTGGGACTTGCCAAAAGATTTTCCTCTGGCAC
CGATGTGGCTGTGACCGCCAACGCCACGGAAGTTGAGAATGAAGGGGCGCTATTAAATCCCAGTTTTCAAAAATTCTCCT
ATGGCACCCTGGGACTGGGTTTGAGTCAGTCCTTGTGGAAGAACTCTTTTGGTAATGCCACCAGGTTGCGCCAGGATCGT
CAGGAAGCCGTGGCGACGGCCGAGGTCGGCAGATTCGACTTGCAGAAAAAAGTCCTGCTGGTCAGCGCGGAAGCCGCGTA
TTGGGATTATGTCTATCAGAATGAAAACCTGCGCATCGGCCGCGCTTCTTTGGAGCGGGCCCGTCGTATTGAATCCTGGA
CCCGCCGTCGTGTGAACGATGGCATCAGTGACCGTGCTGACTTGTTGTCGGCTCAGGCTTTGGTCGCCGCTCGCCAGTTG
CAACTGGTTTCGGCGGAGGATGATCTGGCGGCGGCAAAAAGACAGATCCGCGACTATCTTGAGCTGCGCGATGATGAAGC
GATGCCGGAAATTTCCGGGGATATTTCCCGCTCACGCGCTTTGAACTCGATGGTGGATGGCAATGGCGGCAAGGTTGTGG
CACTGGAGGCTTATCTGTCTTCATTGAATGCCCGGGCCATGTCCTTGGTGGCTAAAGAAACAGAAGACGGCTATCGTCCG
GATCTGGTGCTTTCAGGATCCTACAACACCAACAACTTCCAGCCGGACAAAAGCATTCCGGATGCGACCTCCAAATGGAC
GGACAGCAAACTTCCGACCTGGAAGGTGGGTCTGAATCTGATCTATTTGTTCGACACGGACGTCAAAGGATCTGCCCAGT
CAGCGGCCCGCAAAGATGCTTTGGCCGCCCAGTTGCAAAGTGAAAGAAAGATCCTGGACAGCGAAAGCTCGTGGATCGAG
CTGAATCGTCGTTATTCCGAGATGAACAAGCGGATTGAATCCGCCTCGCTCATTGCGCGTCTGCAGACTGATGCCGCCAA
GGCTCAGACGGATTTGTTCAACAAGGGCCGTTCGATCACGGCCAATGTGATCAATGCGGAAGAAGATGCCGCGGATGCAG
AGCTGACTTTGACCAGACTGAAATCAGAACAAAGAAAGATGGAGGCTCAGGCCCGCTTGTTCGTCACACTGGATGAAAAC
AACCGGGAGGAGAAATAA

Upstream 100 bases:

>100_bases
ACCCCCGTCGGGATGAGTTCAAATCATTAAATGTTTTGATTTGGATAGTCTGCTAAATTACTTTTTCCTTCGAAAGTGCA
TTTCGGAAGGAAATTGAAAA

Downstream 100 bases:

>100_bases
TATGAATTTGCCTGGTCTTTCGATTAAACGACCTATTTTTATTTCCTGTATCGTTATTCTGATGCTGATCCTGGGGGCGT
TCTCGCTGCGCAAAATGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MKKGALLGLLLGLLVGLWQPQALAMNLQEYLQAVINKNKSIQAFDVSKEAAEDRRVSGDIELVPVFTAGVGYLNDKSPLG
QFAQLGGTQTTATDLKLGLAKRFSSGTDVAVTANATEVENEGALLNPSFQKFSYGTLGLGLSQSLWKNSFGNATRLRQDR
QEAVATAEVGRFDLQKKVLLVSAEAAYWDYVYQNENLRIGRASLERARRIESWTRRRVNDGISDRADLLSAQALVAARQL
QLVSAEDDLAAAKRQIRDYLELRDDEAMPEISGDISRSRALNSMVDGNGGKVVALEAYLSSLNARAMSLVAKETEDGYRP
DLVLSGSYNTNNFQPDKSIPDATSKWTDSKLPTWKVGLNLIYLFDTDVKGSAQSAARKDALAAQLQSERKILDSESSWIE
LNRRYSEMNKRIESASLIARLQTDAAKAQTDLFNKGRSITANVINAEEDAADAELTLTRLKSEQRKMEAQARLFVTLDEN
NREEK

Sequences:

>Translated_485_residues
MKKGALLGLLLGLLVGLWQPQALAMNLQEYLQAVINKNKSIQAFDVSKEAAEDRRVSGDIELVPVFTAGVGYLNDKSPLG
QFAQLGGTQTTATDLKLGLAKRFSSGTDVAVTANATEVENEGALLNPSFQKFSYGTLGLGLSQSLWKNSFGNATRLRQDR
QEAVATAEVGRFDLQKKVLLVSAEAAYWDYVYQNENLRIGRASLERARRIESWTRRRVNDGISDRADLLSAQALVAARQL
QLVSAEDDLAAAKRQIRDYLELRDDEAMPEISGDISRSRALNSMVDGNGGKVVALEAYLSSLNARAMSLVAKETEDGYRP
DLVLSGSYNTNNFQPDKSIPDATSKWTDSKLPTWKVGLNLIYLFDTDVKGSAQSAARKDALAAQLQSERKILDSESSWIE
LNRRYSEMNKRIESASLIARLQTDAAKAQTDLFNKGRSITANVINAEEDAADAELTLTRLKSEQRKMEAQARLFVTLDEN
NREEK
>Mature_485_residues
MKKGALLGLLLGLLVGLWQPQALAMNLQEYLQAVINKNKSIQAFDVSKEAAEDRRVSGDIELVPVFTAGVGYLNDKSPLG
QFAQLGGTQTTATDLKLGLAKRFSSGTDVAVTANATEVENEGALLNPSFQKFSYGTLGLGLSQSLWKNSFGNATRLRQDR
QEAVATAEVGRFDLQKKVLLVSAEAAYWDYVYQNENLRIGRASLERARRIESWTRRRVNDGISDRADLLSAQALVAARQL
QLVSAEDDLAAAKRQIRDYLELRDDEAMPEISGDISRSRALNSMVDGNGGKVVALEAYLSSLNARAMSLVAKETEDGYRP
DLVLSGSYNTNNFQPDKSIPDATSKWTDSKLPTWKVGLNLIYLFDTDVKGSAQSAARKDALAAQLQSERKILDSESSWIE
LNRRYSEMNKRIESASLIARLQTDAAKAQTDLFNKGRSITANVINAEEDAADAELTLTRLKSEQRKMEAQARLFVTLDEN
NREEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53512; Mature: 53512

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGALLGLLLGLLVGLWQPQALAMNLQEYLQAVINKNKSIQAFDVSKEAAEDRRVSGDI
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCE
ELVPVFTAGVGYLNDKSPLGQFAQLGGTQTTATDLKLGLAKRFSSGTDVAVTANATEVEN
EEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEECC
EGALLNPSFQKFSYGTLGLGLSQSLWKNSFGNATRLRQDRQEAVATAEVGRFDLQKKVLL
CCCEECCCHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
VSAEAAYWDYVYQNENLRIGRASLERARRIESWTRRRVNDGISDRADLLSAQALVAARQL
EEECHHHHHEEEECCCCEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QLVSAEDDLAAAKRQIRDYLELRDDEAMPEISGDISRSRALNSMVDGNGGKVVALEAYLS
HEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCEEEEHHHHHH
SLNARAMSLVAKETEDGYRPDLVLSGSYNTNNFQPDKSIPDATSKWTDSKLPTWKVGLNL
HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEE
IYLFDTDVKGSAQSAARKDALAAQLQSERKILDSESSWIELNRRYSEMNKRIESASLIAR
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQTDAAKAQTDLFNKGRSITANVINAEEDAADAELTLTRLKSEQRKMEAQARLFVTLDEN
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCC
NREEK
CCCCC
>Mature Secondary Structure
MKKGALLGLLLGLLVGLWQPQALAMNLQEYLQAVINKNKSIQAFDVSKEAAEDRRVSGDI
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCE
ELVPVFTAGVGYLNDKSPLGQFAQLGGTQTTATDLKLGLAKRFSSGTDVAVTANATEVEN
EEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEECC
EGALLNPSFQKFSYGTLGLGLSQSLWKNSFGNATRLRQDRQEAVATAEVGRFDLQKKVLL
CCCEECCCHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
VSAEAAYWDYVYQNENLRIGRASLERARRIESWTRRRVNDGISDRADLLSAQALVAARQL
EEECHHHHHEEEECCCCEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QLVSAEDDLAAAKRQIRDYLELRDDEAMPEISGDISRSRALNSMVDGNGGKVVALEAYLS
HEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCEEEEHHHHHH
SLNARAMSLVAKETEDGYRPDLVLSGSYNTNNFQPDKSIPDATSKWTDSKLPTWKVGLNL
HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEE
IYLFDTDVKGSAQSAARKDALAAQLQSERKILDSESSWIELNRRYSEMNKRIESASLIAR
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQTDAAKAQTDLFNKGRSITANVINAEEDAADAELTLTRLKSEQRKMEAQARLFVTLDEN
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCC
NREEK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA