Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523237

Identifier: 42523237

GI number: 42523237

Start: 1675972

End: 1678845

Strand: Direct

Name: 42523237

Synonym: Bd1743

Alternate gene names: NA

Gene position: 1675972-1678845 (Clockwise)

Preceding gene: 42523236

Following gene: 42523238

Centisome position: 44.3

GC content: 51.53

Gene sequence:

>2874_bases
ATGAATTGCACTCAATTAAATTCAACGGAGCCTTGGATGAACATGAAGGTACTGGTATCCCTTTTGGTGATCGCGTCTGT
CGTAAATGCACAGGAGCAAAATCCCCCTCTGACCCTGGAAGAAGCCGCCAAGCTTTATAAGCCCACCTACAAGACCAACT
TCAGTACCGATATGACGGCTTTCATGCAGAACTCGCCGATCTTTAATGGACTGGGTTTTGTATATGTCAATCCCAACGGG
GTTTCTCCAAAGATCACTGAAACGGTGACCTTCAACACCAATACAATCAAAGTCCCGGTCACTACGACGACAATTGTGGA
TGTGCCATACACTTATACGGTGCCTGTGACCACCACCACCACGGTCACGGTGCCTTACACCTACACAGTCCCTGTAACGA
CCAGCTGGACAACGACTTCTGTGGTTCGCACCGAAGTTGTCACTCCGTACTCAGTTATTTCAAATTCGGGCAATTTCAAC
CTTACTGCTGGAGTGTCTCCGGTCATTCAATCCACCGTGGGTGATGTGGTCAATATGGCAATGGCCAGCCCCCACAGCCT
GCCAAAGAGTGAAAACTACCAGCTCGTGGGAACTGATGCTCCGGGATACTGGGTGGTGAATGGCGCTCCGACGAGCGCTG
CGGACGTTCGCGCCGCGATTGGGTCAAAGGGTTCTAATCAGCCCTTTGATCCCTGGGGTGCGGGGGCGGTGGATCTGTCG
GGCTGGACGACTACGGGAACAAGCAGCTCGTCTGTCACAAATGTTGTCACCAATCCTGCAGACTATGTCGATGGCAACGG
AGTTCTGCACCGTGGTCGCACTGTGACCGTTTCAACTTATTCTTCCGTTGAAGATCGTACCATTGTTCGTTTGTATTCTT
GGAATGACTCCAACGGAAATGGCATCGTTGATGATACGGATCAGGTTCAGATCCTGCAAGGCGGGCGCTTCACTGGCGAG
GCCACATCAGTGGACACCATTGAAAGTGGCGAACGCGTCACCTACCGAGAAGAAACGGTGACTGAACATCACACGGCCAC
CCATCAGGAAGAGCGCACAGGCACTCGTGAAGAAACCCGCACCGAAACTCACGATGAAGAGCGCACCGGTGTTCGTCAGG
AAGAGCGCACTGAAACCCATGAAGAGGAACGCACCGAAACAACCAAACAGGTGACCCAGAACAAGAAAAACGTCTGGAAA
TTCAGTTTCTCTCCGATCCTGTCATTGGACGTGCAAACTCCGACCAAGATCACAAGTCTTGATTCCCAGTTTGTGGTTCC
GACGGTGTCTGAAGGTGTCAGCAGAAAATTCATTGAGCCGGCATCTCAAAACAAGGGCTTCCTTGTTGAAAAGAAAATCG
CCGTAACAGGTGTCGTGGGCGGGAATGTGGTGGCTCAGTATTCCTCTTGGAAACCGGGCACGGCGATCACCTTGGGGATG
GCTCCCATTGCCGGGACAGAGAAAACTTACCGTACTGTTGTTAAAACCGGCTACGAGGCCGAAAACGTATCGGTGCCTTC
TGTTCCGTCGAAGCTGGCGGATCTGAAAAAGCTTAAAGTCGGCGACTCCCTGAGTTTTGCTCAAACGGGTGGGGTTATGT
TCTCTGCGGGTGTGGCTTACGTGGCCATGAACGTGGGTGTGAACTATGTGGCTTTCGGCCAGTGGAAAACCGAAGTTCAA
AGAGTCGGCGACAGCATCTATTATGTGAATCGCACGGCACTGAAGCTGAATAACTTTGGTGCTTCTATCGGAACCACCCT
GACAGTGGCCTATACGGCCAACCAGTTTAAATCCACAGATTCTCAGTTCTCGTGGTTGTTCAACGCCGCCGACCCACAAG
GAGCCAAGGCCCTGGAGAACTTTGTTTTCAAAGGGATTGCCCTGGATGCCCAGAAAGTTGTGGACTCCAATGGTGAAGCT
TCAGTGATGAAAGTCACCAAGCAGGAAAATATCGCCCGCGGCGCCATGCGCACGATCAGCATGGGGGTGCCTTATGTCAC
CGCCAGCTGGGGTAAAGGTCGTATCAACTCCACTCAGTTGACCCAGTACTTCCCTGACAACACGTTGGGGGATGCGAACT
ATTCTGTGTACTTGAAAGCGCGTGACAGTCGCATGTTCAACTGGATTGAAAACTCAACGACAGCATTCTCTGCTGGCCGC
TACTTTGTTCGTGATGTGAATACCAATGATCTTCAGGACTCCGGCTATATGGGGCAGTTCATTGTGTCTTACACGGACAC
TCATACCAAGGGCTCAGAGCTACAGCGCGTGGTGAATCAACTGGTGGCATTGACGGGGATGCATAAAGAGCTTTATGTCA
AAGTTCCGGATATGAAGAACATCGGTTATAGCACTCTGGCCTTCAGTTTGAATTTTGATAAGTCAGCCACGGATTTCCTG
ATGGCTTTGGCAACGGACCGCCAGGCTTCGCGCAAGCTTGAAAGAGACGCTCAGGTGTTCCTGAATGGTTATATCCGCTC
CAACGGCTTCAACAGAGCGCAAAACTCTTCCGACCAGGATCCTATCAAAATGTGCGGGACGGTGTACAACCTTGATATCA
GTGTTTGTATCCGCCAGGCGCAGGACGCCACTTTGCACGCCACCGGCGAGGCAATTGTTAATCTTCGTGATATGAAGCTG
GCTTTGGATCGCGGTAATCGTAAGGCCTTCACTGTGGCTTATGCGGACTTCGGCAAGTCTTTGACTTCCAGCCCGTTCAC
ATTCCAGGCGATCTTGTCTGCGGCGGTGGCGGGGACAGCGGGTAAAGGTGTGACCTCTTCTTACAGTGTCTCTGGGACAC
GCATTAAGAACTACTCTTTGACGCCAAGCTGGGACGCTGCTTTGGTGAATGAAGTAAAACCTTTGGTTCAATAG

Upstream 100 bases:

>100_bases
GGCGGTTATTCCGGACTGCCAGGCTGCCGGGGACAGTAATATTTTCCAACCAACTATAAACAAAAAGTCTTTTCTTTGTG
TTCGATGAAAATGCCCGTAT

Downstream 100 bases:

>100_bases
GCCCCCGACATTCAAAATTCTTAACGAAAGCCAGGTTTCAGGACCTGGCTTTTTTGTTTTTCATTGCTATAGTTCTGAAT
GGATTGCGAGGTGCTTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 957; Mature: 957

Protein sequence:

>957_residues
MNCTQLNSTEPWMNMKVLVSLLVIASVVNAQEQNPPLTLEEAAKLYKPTYKTNFSTDMTAFMQNSPIFNGLGFVYVNPNG
VSPKITETVTFNTNTIKVPVTTTTIVDVPYTYTVPVTTTTTVTVPYTYTVPVTTSWTTTSVVRTEVVTPYSVISNSGNFN
LTAGVSPVIQSTVGDVVNMAMASPHSLPKSENYQLVGTDAPGYWVVNGAPTSAADVRAAIGSKGSNQPFDPWGAGAVDLS
GWTTTGTSSSSVTNVVTNPADYVDGNGVLHRGRTVTVSTYSSVEDRTIVRLYSWNDSNGNGIVDDTDQVQILQGGRFTGE
ATSVDTIESGERVTYREETVTEHHTATHQEERTGTREETRTETHDEERTGVRQEERTETHEEERTETTKQVTQNKKNVWK
FSFSPILSLDVQTPTKITSLDSQFVVPTVSEGVSRKFIEPASQNKGFLVEKKIAVTGVVGGNVVAQYSSWKPGTAITLGM
APIAGTEKTYRTVVKTGYEAENVSVPSVPSKLADLKKLKVGDSLSFAQTGGVMFSAGVAYVAMNVGVNYVAFGQWKTEVQ
RVGDSIYYVNRTALKLNNFGASIGTTLTVAYTANQFKSTDSQFSWLFNAADPQGAKALENFVFKGIALDAQKVVDSNGEA
SVMKVTKQENIARGAMRTISMGVPYVTASWGKGRINSTQLTQYFPDNTLGDANYSVYLKARDSRMFNWIENSTTAFSAGR
YFVRDVNTNDLQDSGYMGQFIVSYTDTHTKGSELQRVVNQLVALTGMHKELYVKVPDMKNIGYSTLAFSLNFDKSATDFL
MALATDRQASRKLERDAQVFLNGYIRSNGFNRAQNSSDQDPIKMCGTVYNLDISVCIRQAQDATLHATGEAIVNLRDMKL
ALDRGNRKAFTVAYADFGKSLTSSPFTFQAILSAAVAGTAGKGVTSSYSVSGTRIKNYSLTPSWDAALVNEVKPLVQ

Sequences:

>Translated_957_residues
MNCTQLNSTEPWMNMKVLVSLLVIASVVNAQEQNPPLTLEEAAKLYKPTYKTNFSTDMTAFMQNSPIFNGLGFVYVNPNG
VSPKITETVTFNTNTIKVPVTTTTIVDVPYTYTVPVTTTTTVTVPYTYTVPVTTSWTTTSVVRTEVVTPYSVISNSGNFN
LTAGVSPVIQSTVGDVVNMAMASPHSLPKSENYQLVGTDAPGYWVVNGAPTSAADVRAAIGSKGSNQPFDPWGAGAVDLS
GWTTTGTSSSSVTNVVTNPADYVDGNGVLHRGRTVTVSTYSSVEDRTIVRLYSWNDSNGNGIVDDTDQVQILQGGRFTGE
ATSVDTIESGERVTYREETVTEHHTATHQEERTGTREETRTETHDEERTGVRQEERTETHEEERTETTKQVTQNKKNVWK
FSFSPILSLDVQTPTKITSLDSQFVVPTVSEGVSRKFIEPASQNKGFLVEKKIAVTGVVGGNVVAQYSSWKPGTAITLGM
APIAGTEKTYRTVVKTGYEAENVSVPSVPSKLADLKKLKVGDSLSFAQTGGVMFSAGVAYVAMNVGVNYVAFGQWKTEVQ
RVGDSIYYVNRTALKLNNFGASIGTTLTVAYTANQFKSTDSQFSWLFNAADPQGAKALENFVFKGIALDAQKVVDSNGEA
SVMKVTKQENIARGAMRTISMGVPYVTASWGKGRINSTQLTQYFPDNTLGDANYSVYLKARDSRMFNWIENSTTAFSAGR
YFVRDVNTNDLQDSGYMGQFIVSYTDTHTKGSELQRVVNQLVALTGMHKELYVKVPDMKNIGYSTLAFSLNFDKSATDFL
MALATDRQASRKLERDAQVFLNGYIRSNGFNRAQNSSDQDPIKMCGTVYNLDISVCIRQAQDATLHATGEAIVNLRDMKL
ALDRGNRKAFTVAYADFGKSLTSSPFTFQAILSAAVAGTAGKGVTSSYSVSGTRIKNYSLTPSWDAALVNEVKPLVQ
>Mature_957_residues
MNCTQLNSTEPWMNMKVLVSLLVIASVVNAQEQNPPLTLEEAAKLYKPTYKTNFSTDMTAFMQNSPIFNGLGFVYVNPNG
VSPKITETVTFNTNTIKVPVTTTTIVDVPYTYTVPVTTTTTVTVPYTYTVPVTTSWTTTSVVRTEVVTPYSVISNSGNFN
LTAGVSPVIQSTVGDVVNMAMASPHSLPKSENYQLVGTDAPGYWVVNGAPTSAADVRAAIGSKGSNQPFDPWGAGAVDLS
GWTTTGTSSSSVTNVVTNPADYVDGNGVLHRGRTVTVSTYSSVEDRTIVRLYSWNDSNGNGIVDDTDQVQILQGGRFTGE
ATSVDTIESGERVTYREETVTEHHTATHQEERTGTREETRTETHDEERTGVRQEERTETHEEERTETTKQVTQNKKNVWK
FSFSPILSLDVQTPTKITSLDSQFVVPTVSEGVSRKFIEPASQNKGFLVEKKIAVTGVVGGNVVAQYSSWKPGTAITLGM
APIAGTEKTYRTVVKTGYEAENVSVPSVPSKLADLKKLKVGDSLSFAQTGGVMFSAGVAYVAMNVGVNYVAFGQWKTEVQ
RVGDSIYYVNRTALKLNNFGASIGTTLTVAYTANQFKSTDSQFSWLFNAADPQGAKALENFVFKGIALDAQKVVDSNGEA
SVMKVTKQENIARGAMRTISMGVPYVTASWGKGRINSTQLTQYFPDNTLGDANYSVYLKARDSRMFNWIENSTTAFSAGR
YFVRDVNTNDLQDSGYMGQFIVSYTDTHTKGSELQRVVNQLVALTGMHKELYVKVPDMKNIGYSTLAFSLNFDKSATDFL
MALATDRQASRKLERDAQVFLNGYIRSNGFNRAQNSSDQDPIKMCGTVYNLDISVCIRQAQDATLHATGEAIVNLRDMKL
ALDRGNRKAFTVAYADFGKSLTSSPFTFQAILSAAVAGTAGKGVTSSYSVSGTRIKNYSLTPSWDAALVNEVKPLVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104188; Mature: 104188

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCTQLNSTEPWMNMKVLVSLLVIASVVNAQEQNPPLTLEEAAKLYKPTYKTNFSTDMTA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHH
FMQNSPIFNGLGFVYVNPNGVSPKITETVTFNTNTIKVPVTTTTIVDVPYTYTVPVTTTT
HHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEEEEE
TVTVPYTYTVPVTTSWTTTSVVRTEVVTPYSVISNSGNFNLTAGVSPVIQSTVGDVVNMA
EEEEEEEEEEEEECCCCCHHEEEECCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHH
MASPHSLPKSENYQLVGTDAPGYWVVNGAPTSAADVRAAIGSKGSNQPFDPWGAGAVDLS
HCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECC
GWTTTGTSSSSVTNVVTNPADYVDGNGVLHRGRTVTVSTYSSVEDRTIVRLYSWNDSNGN
CCEECCCCCCCEEEEECCCHHHCCCCCEEECCEEEEEEECCCCCCCEEEEEEEECCCCCC
GIVDDTDQVQILQGGRFTGEATSVDTIESGERVTYREETVTEHHTATHQEERTGTREETR
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCHHHHCCCCHHHC
TETHDEERTGVRQEERTETHEEERTETTKQVTQNKKNVWKFSFSPILSLDVQTPTKITSL
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEECC
DSQFVVPTVSEGVSRKFIEPASQNKGFLVEKKIAVTGVVGGNVVAQYSSWKPGTAITLGM
CCCEECCCHHCCHHHHHCCCCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCEEEEEC
APIAGTEKTYRTVVKTGYEAENVSVPSVPSKLADLKKLKVGDSLSFAQTGGVMFSAGVAY
CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCEEEECCEEE
VAMNVGVNYVAFGQWKTEVQRVGDSIYYVNRTALKLNNFGASIGTTLTVAYTANQFKSTD
EEEECCCCEEEECCHHHHHHHHCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCHHCCCC
SQFSWLFNAADPQGAKALENFVFKGIALDAQKVVDSNGEASVMKVTKQENIARGAMRTIS
CCEEEEEECCCCCHHHHHHHHHHHCEEECHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHH
MGVPYVTASWGKGRINSTQLTQYFPDNTLGDANYSVYLKARDSRMFNWIENSTTAFSAGR
CCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHCCCCEEEECCC
YFVRDVNTNDLQDSGYMGQFIVSYTDTHTKGSELQRVVNQLVALTGMHKELYVKVPDMKN
EEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
IGYSTLAFSLNFDKSATDFLMALATDRQASRKLERDAQVFLNGYIRSNGFNRAQNSSDQD
CCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCC
PIKMCGTVYNLDISVCIRQAQDATLHATGEAIVNLRDMKLALDRGNRKAFTVAYADFGKS
HHHHCCEEEECCHHHHHHHCCCCEEEECCHHEEEEEHEEEEEECCCCEEEEEEEHHHCCH
LTSSPFTFQAILSAAVAGTAGKGVTSSYSVSGTRIKNYSLTPSWDAALVNEVKPLVQ
HCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNCTQLNSTEPWMNMKVLVSLLVIASVVNAQEQNPPLTLEEAAKLYKPTYKTNFSTDMTA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHH
FMQNSPIFNGLGFVYVNPNGVSPKITETVTFNTNTIKVPVTTTTIVDVPYTYTVPVTTTT
HHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEEEEE
TVTVPYTYTVPVTTSWTTTSVVRTEVVTPYSVISNSGNFNLTAGVSPVIQSTVGDVVNMA
EEEEEEEEEEEEECCCCCHHEEEECCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHH
MASPHSLPKSENYQLVGTDAPGYWVVNGAPTSAADVRAAIGSKGSNQPFDPWGAGAVDLS
HCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECC
GWTTTGTSSSSVTNVVTNPADYVDGNGVLHRGRTVTVSTYSSVEDRTIVRLYSWNDSNGN
CCEECCCCCCCEEEEECCCHHHCCCCCEEECCEEEEEEECCCCCCCEEEEEEEECCCCCC
GIVDDTDQVQILQGGRFTGEATSVDTIESGERVTYREETVTEHHTATHQEERTGTREETR
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCHHHHCCCCHHHC
TETHDEERTGVRQEERTETHEEERTETTKQVTQNKKNVWKFSFSPILSLDVQTPTKITSL
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEECC
DSQFVVPTVSEGVSRKFIEPASQNKGFLVEKKIAVTGVVGGNVVAQYSSWKPGTAITLGM
CCCEECCCHHCCHHHHHCCCCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCEEEEEC
APIAGTEKTYRTVVKTGYEAENVSVPSVPSKLADLKKLKVGDSLSFAQTGGVMFSAGVAY
CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCEEEECCEEE
VAMNVGVNYVAFGQWKTEVQRVGDSIYYVNRTALKLNNFGASIGTTLTVAYTANQFKSTD
EEEECCCCEEEECCHHHHHHHHCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCHHCCCC
SQFSWLFNAADPQGAKALENFVFKGIALDAQKVVDSNGEASVMKVTKQENIARGAMRTIS
CCEEEEEECCCCCHHHHHHHHHHHCEEECHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHH
MGVPYVTASWGKGRINSTQLTQYFPDNTLGDANYSVYLKARDSRMFNWIENSTTAFSAGR
CCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHCCCCEEEECCC
YFVRDVNTNDLQDSGYMGQFIVSYTDTHTKGSELQRVVNQLVALTGMHKELYVKVPDMKN
EEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
IGYSTLAFSLNFDKSATDFLMALATDRQASRKLERDAQVFLNGYIRSNGFNRAQNSSDQD
CCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCC
PIKMCGTVYNLDISVCIRQAQDATLHATGEAIVNLRDMKLALDRGNRKAFTVAYADFGKS
HHHHCCEEEECCHHHHHHHCCCCEEEECCHHEEEEEHEEEEEECCCCEEEEEEEHHHCCH
LTSSPFTFQAILSAAVAGTAGKGVTSSYSVSGTRIKNYSLTPSWDAALVNEVKPLVQ
HCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA