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The map label for this gene is blc [H]

Identifier: 42523217

GI number: 42523217

Start: 1657075

End: 1657641

Strand: Direct

Name: blc [H]

Synonym: Bd1721

Alternate gene names: 42523217

Gene position: 1657075-1657641 (Clockwise)

Preceding gene: 42523216

Following gene: 42523218

Centisome position: 43.8

GC content: 50.79

Gene sequence:

>567_bases
ATGAAAAATCTGATTCTTTCTGTTTTTGTTCTGGGCTTTGTTTCAACGGGCTGGGCGGCACCGGCAACAGTTCCCTTTGT
GGATCTGAACAAGTATCTGGGCAAGTGGCACGAGGTTGCCAGCATTCCGATGGTGTTTCAAAAACAGTGTGTTGGAAACA
CGACCGCCGAGTATTCTGTGGCGGAAGAGGGCATGATCCAGGTTTTGAATTCCTGTGACACCAAGAGCGGTGATCGCTCC
GTCGCCGAAGGCCGGGCGAAAGTTGTTGATAGCGACAGCAACGCCAAGCTGAAGGTGACGTTTGTTAAAATCATCGACTG
GGTCTTTGGCTTCGGTGGAGACTATTGGATCCTTGATCTGGCTCCTGATTATTCTTATGCGGTGGTTGGTGATCCGACGC
TTCAGTATGCGTGGATTCTTTCACGTCAGCCGGCTTTAAGCCGGGAAGCATTCCTGGCGGCCGAACAAAAATTAAAAACT
CTGGGCTACGACACGTGCTCCATTCTGACATCGGTTCAGGACGGCGGCTTAAGTCAGCGCACGCCTCTTTGTGAATTTGT
GAAGTAG

Upstream 100 bases:

>100_bases
GCGCACTGGTGTTTCCAATATGGAAATAGGCGTGTTCCTATTTACAATAGGCAGGCCCGGGGATTCTGTCTATAACAGCT
TCAGTAGAAAAGGAGCTTTT

Downstream 100 bases:

>100_bases
GGTGATGGATAAACGTCTTTCGAAAATTTCATTCTTTGATCTGATGCTTTTGGCGGAACTGCCGGACCATAAGTCCTTAA
GGTCGCTGTCCCGTTCGCTG

Product: outer membrane lipoprotein Blc

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKNLILSVFVLGFVSTGWAAPATVPFVDLNKYLGKWHEVASIPMVFQKQCVGNTTAEYSVAEEGMIQVLNSCDTKSGDRS
VAEGRAKVVDSDSNAKLKVTFVKIIDWVFGFGGDYWILDLAPDYSYAVVGDPTLQYAWILSRQPALSREAFLAAEQKLKT
LGYDTCSILTSVQDGGLSQRTPLCEFVK

Sequences:

>Translated_188_residues
MKNLILSVFVLGFVSTGWAAPATVPFVDLNKYLGKWHEVASIPMVFQKQCVGNTTAEYSVAEEGMIQVLNSCDTKSGDRS
VAEGRAKVVDSDSNAKLKVTFVKIIDWVFGFGGDYWILDLAPDYSYAVVGDPTLQYAWILSRQPALSREAFLAAEQKLKT
LGYDTCSILTSVQDGGLSQRTPLCEFVK
>Mature_188_residues
MKNLILSVFVLGFVSTGWAAPATVPFVDLNKYLGKWHEVASIPMVFQKQCVGNTTAEYSVAEEGMIQVLNSCDTKSGDRS
VAEGRAKVVDSDSNAKLKVTFVKIIDWVFGFGGDYWILDLAPDYSYAVVGDPTLQYAWILSRQPALSREAFLAAEQKLKT
LGYDTCSILTSVQDGGLSQRTPLCEFVK

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=131, Percent_Identity=39.6946564885496, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI1790592, Length=124, Percent_Identity=34.6774193548387, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 20647; Mature: 20647

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLILSVFVLGFVSTGWAAPATVPFVDLNKYLGKWHEVASIPMVFQKQCVGNTTAEYSV
CCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHH
AEEGMIQVLNSCDTKSGDRSVAEGRAKVVDSDSNAKLKVTFVKIIDWVFGFGGDYWILDL
HHHHHHHHHHHCCCCCCCCHHHCCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCEEEEEE
APDYSYAVVGDPTLQYAWILSRQPALSREAFLAAEQKLKTLGYDTCSILTSVQDGGLSQR
CCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
TPLCEFVK
CCHHHHCC
>Mature Secondary Structure
MKNLILSVFVLGFVSTGWAAPATVPFVDLNKYLGKWHEVASIPMVFQKQCVGNTTAEYSV
CCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHH
AEEGMIQVLNSCDTKSGDRSVAEGRAKVVDSDSNAKLKVTFVKIIDWVFGFGGDYWILDL
HHHHHHHHHHHCCCCCCCCHHHCCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCEEEEEE
APDYSYAVVGDPTLQYAWILSRQPALSREAFLAAEQKLKTLGYDTCSILTSVQDGGLSQR
CCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
TPLCEFVK
CCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]