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The map label for this gene is capF

Identifier: 42523191

GI number: 42523191

Start: 1630440

End: 1631540

Strand: Direct

Name: capF

Synonym: Bd1694

Alternate gene names: NA

Gene position: 1630440-1631540 (Clockwise)

Preceding gene: 42523190

Following gene: 42523192

Centisome position: 43.1

GC content: 45.23

Gene sequence:

>1101_bases
ATGAAGGTTCTGATCACGGGTTCCCAAGGATTTCTGGGCAAGAATCTGATCGTTCGACTTCGGGAGCTTAAAAAGTACGA
GATTGTTGAGTTTAATCGTGAAAATACGGTTGCTGATCTTCCGAAGCTTGTTGGCGGGGCAGATTTTGTATTCCATTTGG
CAGGAGTAAATCGCCCTCAGAATGATTTGGAATTCAAGGCAGGGAACGCGGACCTTACTCAAGAGTTATGCAGGGTTTTG
AAGGAAACTGGAAAATCAATTCCTGTGGTTTATGCCTCTTCCATTCAAGCAGAGCTAGAGAATGCTTATGGGCAGTCAAA
AAAGGCGGCAGAAGATTTTCTGCTTGAACTGACAGGCAAGCTTCCTGTTTCAATCTATAGATTGCCGAATATTTTCGGAA
AGTGGAGTCGGCCTAATTATAATTCAGCTGTAGCCACTTTTTGCCATAATATTTCCCAAGGTTTGCCGATTGCAATTAAC
AATCCAGACGCGGCTGTGACACTTGTCTACGTCGATGATGTGGTATCTCAGTTTTTGACTCACTTGGAAGGTCCCGATGC
CAAGGAGTTGTTCCCGGCCATTGCTCCTACCTACAAAGTGACAGTTGGGGAGCTCGCGAGGCAGATCGAAGCATTTAAGG
AAAGCCGAAGTAGTCTGGTAACAGAGGCTGTTGGGGCTGGGCTGGTTCGGGCTCTTCATGCTACTTATCTTAGCTTTTTG
AAGCCGGATCAGTTTGCCTACTCTGTGCCTCGGTACGGTGATAATCGCGGTGTGTTTGTTGAAATGCTTAAAACAAAAGA
TTCTGGTCAGTTTTCCTTCTTTACTGCGCATCCTGGTATTACGCGTGGTGGACACTATCATCACAGTAAGACTGAGAAGT
TTTTGGTTTTGAAAGGGAAAGCTCGTTATCGTTTCCGTCACATTGTCACTAAAGAGTTCTACGAGCTTGATGTGGATGCT
GTGGATTCGAAGATTGTGGAGACTATTCCTGGCTGGTCTCATGACATTACCAATATTGGCAACGAAGAGTTGGTAGTTAT
GTTATGGGCCAATGAGATTTTTGATCGCGCAAAACCTGATACGGTAGCGCACGAGGTTTAG

Upstream 100 bases:

>100_bases
CAGAACGTCTTGATGTCGCTGGGATGAAAGAGCTTTTGCTTAAGCTTGAATTCATTCGTGCTATTAAAGATGGACGCTCG
GTAAATCCGGAGGATTAGCC

Downstream 100 bases:

>100_bases
TTTGAAGAAAATGAAAGTAATGACAGTTTTAGGTACCAGACCTGAGATTATTCGGTTGTCCCGGGTTTTGGCTAAATTAG
ATCAACACTGTGAACATAAA

Product: capsular polysaccharide synthesis enzyme Cap5F

Products: NA

Alternate protein names: Capsular Polysaccharide Biosynthesis K; Capsular Polysaccharide Synthesis; Capsular Polysaccharide Synthesis CapF; Capsular Polysaccharide Biosynthesis F; Nucleoside-Diphosphate-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase WbjC; UDP-2-Acetamido-2 6-Dideoxy-Beta-L-Talose 4-Dehydrogenase; NAD Dependent Epimerase/Dehydratase; FnlB Protein Involved In UDP-L-FucpNAc Biosynthesis; Epimerase/Dehydratase; Capsular Polysaccharide Synthesis Cap5F; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKVLITGSQGFLGKNLIVRLRELKKYEIVEFNRENTVADLPKLVGGADFVFHLAGVNRPQNDLEFKAGNADLTQELCRVL
KETGKSIPVVYASSIQAELENAYGQSKKAAEDFLLELTGKLPVSIYRLPNIFGKWSRPNYNSAVATFCHNISQGLPIAIN
NPDAAVTLVYVDDVVSQFLTHLEGPDAKELFPAIAPTYKVTVGELARQIEAFKESRSSLVTEAVGAGLVRALHATYLSFL
KPDQFAYSVPRYGDNRGVFVEMLKTKDSGQFSFFTAHPGITRGGHYHHSKTEKFLVLKGKARYRFRHIVTKEFYELDVDA
VDSKIVETIPGWSHDITNIGNEELVVMLWANEIFDRAKPDTVAHEV

Sequences:

>Translated_366_residues
MKVLITGSQGFLGKNLIVRLRELKKYEIVEFNRENTVADLPKLVGGADFVFHLAGVNRPQNDLEFKAGNADLTQELCRVL
KETGKSIPVVYASSIQAELENAYGQSKKAAEDFLLELTGKLPVSIYRLPNIFGKWSRPNYNSAVATFCHNISQGLPIAIN
NPDAAVTLVYVDDVVSQFLTHLEGPDAKELFPAIAPTYKVTVGELARQIEAFKESRSSLVTEAVGAGLVRALHATYLSFL
KPDQFAYSVPRYGDNRGVFVEMLKTKDSGQFSFFTAHPGITRGGHYHHSKTEKFLVLKGKARYRFRHIVTKEFYELDVDA
VDSKIVETIPGWSHDITNIGNEELVVMLWANEIFDRAKPDTVAHEV
>Mature_366_residues
MKVLITGSQGFLGKNLIVRLRELKKYEIVEFNRENTVADLPKLVGGADFVFHLAGVNRPQNDLEFKAGNADLTQELCRVL
KETGKSIPVVYASSIQAELENAYGQSKKAAEDFLLELTGKLPVSIYRLPNIFGKWSRPNYNSAVATFCHNISQGLPIAIN
NPDAAVTLVYVDDVVSQFLTHLEGPDAKELFPAIAPTYKVTVGELARQIEAFKESRSSLVTEAVGAGLVRALHATYLSFL
KPDQFAYSVPRYGDNRGVFVEMLKTKDSGQFSFFTAHPGITRGGHYHHSKTEKFLVLKGKARYRFRHIVTKEFYELDVDA
VDSKIVETIPGWSHDITNIGNEELVVMLWANEIFDRAKPDTVAHEV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40835; Mature: 40835

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLITGSQGFLGKNLIVRLRELKKYEIVEFNRENTVADLPKLVGGADFVFHLAGVNRPQ
CEEEEECCCCCCHHHHHHHHHHHCHHHEEEECCCCCHHHHHHHHCCHHHEEEECCCCCCC
NDLEFKAGNADLTQELCRVLKETGKSIPVVYASSIQAELENAYGQSKKAAEDFLLELTGK
CCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCC
LPVSIYRLPNIFGKWSRPNYNSAVATFCHNISQGLPIAINNPDAAVTLVYVDDVVSQFLT
CCEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEEHHHHHHHHHH
HLEGPDAKELFPAIAPTYKVTVGELARQIEAFKESRSSLVTEAVGAGLVRALHATYLSFL
HCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KPDQFAYSVPRYGDNRGVFVEMLKTKDSGQFSFFTAHPGITRGGHYHHSKTEKFLVLKGK
CCCHHEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECC
ARYRFRHIVTKEFYELDVDAVDSKIVETIPGWSHDITNIGNEELVVMLWANEIFDRAKPD
CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECHHHHHCCCCC
TVAHEV
HHCCCC
>Mature Secondary Structure
MKVLITGSQGFLGKNLIVRLRELKKYEIVEFNRENTVADLPKLVGGADFVFHLAGVNRPQ
CEEEEECCCCCCHHHHHHHHHHHCHHHEEEECCCCCHHHHHHHHCCHHHEEEECCCCCCC
NDLEFKAGNADLTQELCRVLKETGKSIPVVYASSIQAELENAYGQSKKAAEDFLLELTGK
CCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCC
LPVSIYRLPNIFGKWSRPNYNSAVATFCHNISQGLPIAINNPDAAVTLVYVDDVVSQFLT
CCEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEEHHHHHHHHHH
HLEGPDAKELFPAIAPTYKVTVGELARQIEAFKESRSSLVTEAVGAGLVRALHATYLSFL
HCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KPDQFAYSVPRYGDNRGVFVEMLKTKDSGQFSFFTAHPGITRGGHYHHSKTEKFLVLKGK
CCCHHEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECC
ARYRFRHIVTKEFYELDVDAVDSKIVETIPGWSHDITNIGNEELVVMLWANEIFDRAKPD
CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECHHHHHCCCCC
TVAHEV
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA