Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523163

Identifier: 42523163

GI number: 42523163

Start: 1595512

End: 1596252

Strand: Direct

Name: 42523163

Synonym: Bd1663

Alternate gene names: NA

Gene position: 1595512-1596252 (Clockwise)

Preceding gene: 42523161

Following gene: 42523164

Centisome position: 42.18

GC content: 50.74

Gene sequence:

>741_bases
ATGAGACGTCAAAGAGACTTGTTGGTTCTCTTGGGGTTGGTGGCAATCGGCAGTCTTGGCATCGCCGCTTTTCGCGGATT
GTCGACGCCGGAGAAGGCTAACTGCGTTCAGATTTATTTCGATGCGGAATCCCGGGACCAATTGGCCTCTGGGAAAGCCT
TTGCCGATCAGTTGCGTGGATTGTTGGCCCCGTATGTGGGGTATTCTGTTCACGCTTCGGGGATTGCGAACTATCAAAGC
GGAGAAGTGCATCGCTGTGATAAGAATATTTATATTGGAACTCATTTTGACCATCGCGTTCCCCGGGTGTTTGTTGAAGA
CTTTATGAGCGCCAAGGGGAGCGTGGCTTGGTTTGGATATAATGTGTGGCAGATGGGCCCGCGCCTGGAAAACGAGATGG
GTCTGCGTTTTTTAAGAATGGCTCGGCAGGAGTTCACCGGCTTTTTTGATGAGGTTTTGTATGAGGGCGGCTTCTTTAAA
AAGAACAGTAAGACCCTGACTGAACAGGTCGAGCTTCTGCCTTCGGACATGAGCAAATTTTCCATGTTGGCGGAGTCGCG
AAACTCCATCACCCGCGAAATCGTACCCTATATCGTTCAATCAAAAAATCGCTTCTATGTGGCTGACGTGCCAGAGCTTG
AGGCCGGTCACATGAACCTGATGATGGCCGAGATTCTGGCCCGGTTTATGGAATCCAAAGTGCAGCACCGCGGGGTTATC
GCCTTTGGGCTAGGTCATTAA

Upstream 100 bases:

>100_bases
GGGTTCGAAGTATTTAGTTCTGACGATCTTTACATCAACTTAACTCGAGTTTTCAAAAAGACCTCGTTAGCCTTGGTTAT
CCCTTTCAAGTAGGTGAAGA

Downstream 100 bases:

>100_bases
ATGACCGTTCCTGCTTTGCGATTGCTTCACCCGAACGGAGTGGTTAGGCTAGTGGGATGACATCACTTCAGACTGATAAG
TACTTTATTCGTGAAAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRRQRDLLVLLGLVAIGSLGIAAFRGLSTPEKANCVQIYFDAESRDQLASGKAFADQLRGLLAPYVGYSVHASGIANYQS
GEVHRCDKNIYIGTHFDHRVPRVFVEDFMSAKGSVAWFGYNVWQMGPRLENEMGLRFLRMARQEFTGFFDEVLYEGGFFK
KNSKTLTEQVELLPSDMSKFSMLAESRNSITREIVPYIVQSKNRFYVADVPELEAGHMNLMMAEILARFMESKVQHRGVI
AFGLGH

Sequences:

>Translated_246_residues
MRRQRDLLVLLGLVAIGSLGIAAFRGLSTPEKANCVQIYFDAESRDQLASGKAFADQLRGLLAPYVGYSVHASGIANYQS
GEVHRCDKNIYIGTHFDHRVPRVFVEDFMSAKGSVAWFGYNVWQMGPRLENEMGLRFLRMARQEFTGFFDEVLYEGGFFK
KNSKTLTEQVELLPSDMSKFSMLAESRNSITREIVPYIVQSKNRFYVADVPELEAGHMNLMMAEILARFMESKVQHRGVI
AFGLGH
>Mature_246_residues
MRRQRDLLVLLGLVAIGSLGIAAFRGLSTPEKANCVQIYFDAESRDQLASGKAFADQLRGLLAPYVGYSVHASGIANYQS
GEVHRCDKNIYIGTHFDHRVPRVFVEDFMSAKGSVAWFGYNVWQMGPRLENEMGLRFLRMARQEFTGFFDEVLYEGGFFK
KNSKTLTEQVELLPSDMSKFSMLAESRNSITREIVPYIVQSKNRFYVADVPELEAGHMNLMMAEILARFMESKVQHRGVI
AFGLGH

Specific function: Unknown

COG id: COG5298

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27835; Mature: 27835

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQRDLLVLLGLVAIGSLGIAAFRGLSTPEKANCVQIYFDAESRDQLASGKAFADQLRG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCHHHHHHHHH
LLAPYVGYSVHASGIANYQSGEVHRCDKNIYIGTHFDHRVPRVFVEDFMSAKGSVAWFGY
HHHHHHCCEEECCCCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEC
NVWQMGPRLENEMGLRFLRMARQEFTGFFDEVLYEGGFFKKNSKTLTEQVELLPSDMSKF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SMLAESRNSITREIVPYIVQSKNRFYVADVPELEAGHMNLMMAEILARFMESKVQHRGVI
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
AFGLGH
EEECCC
>Mature Secondary Structure
MRRQRDLLVLLGLVAIGSLGIAAFRGLSTPEKANCVQIYFDAESRDQLASGKAFADQLRG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCHHHHHHHHH
LLAPYVGYSVHASGIANYQSGEVHRCDKNIYIGTHFDHRVPRVFVEDFMSAKGSVAWFGY
HHHHHHCCEEECCCCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEC
NVWQMGPRLENEMGLRFLRMARQEFTGFFDEVLYEGGFFKKNSKTLTEQVELLPSDMSKF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SMLAESRNSITREIVPYIVQSKNRFYVADVPELEAGHMNLMMAEILARFMESKVQHRGVI
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
AFGLGH
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA