| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is pstS [H]
Identifier: 42523158
GI number: 42523158
Start: 1590589
End: 1591590
Strand: Direct
Name: pstS [H]
Synonym: Bd1658
Alternate gene names: 42523158
Gene position: 1590589-1591590 (Clockwise)
Preceding gene: 42523156
Following gene: 42523159
Centisome position: 42.05
GC content: 48.1
Gene sequence:
>1002_bases ATGTTGACCAACTTTGTAGTGTCTTTGTCTGTTGTTATGGGCGCGGCTTTGGCGCACGCACAAGCTCCAGTTATCAAAAT CGATGGTTCCTCGACTGTGTTCCCAATCACCGAAGCGATGGCGGAAGAGTTCCAAACTTCCCAGCGTGGTAAAGTGCGTG TGACCGTGGGTATCTCCGGAACAGGCGGGGGCTTCAAAAAGTTCTGCCGTGGTGAAACAGACGTTCAAAATGCATCCCGT CCAATTCAGGCCTCTGAAATCGAAGCTTGCCGTAAAGCGGGCATCAAGTTCCTGGAATTGCCAGTGGCTTATGACGCTAC TGCTGTGGTGGTAAATCCTAAGAACACATGGTTGAAGTCCATCACCGTGGCTGACCTTAAAAAAATGTGGGAGCCAGGCG CTCAAGGCAAAATCAACACCTGGGCTGACGTGAATCCAGCTTGGCCTAAAGAAAAACTGAAGCTTTACGGTGCAGGTTCA GACTCTGGCACCTTTGACTACTTCACTGAAGCCGTTGTTGGTAAATCCAAATCCTCTCGCGGTGACTATACAGCTTCTGA AGATGACAACACTTTGGTGACAGGTGTTTCCAATGATCTTTACGCTTTGGGTTATGTTCCGCTGGCGTACTATGAAGAGA ACAAAGGTAAGCTGAAAGTCGTAGCTATCGTGGGTGGCGACAAAGCCCCTAAGAAAAACGAAGCGGTGCTTCCAGGTCGT GAAACCGTTGAGAACGGTTCTTACTTCCCACTGTCTCGCCCCATCTTTATCTATGTGAGCGAAAAGTCCATGGCGAAGCC GGAAGTAAAGGAGTTCATCAACTTCTATATCGGCAAGTCCTTTGAAATCGTTCCTCAGGTGAAATACGTTCCACTTCCAG CCAAGGCTTATGACATGGTTAAAGAGAACGTTAAAAAGAACAAGCTTGGAACCGTCTTTGGCGGCCACTCTGAAGTGGGT TTGAAAATTGAAGAGTTGATGAAACGTGAAGGTTCGTTGTAG
Upstream 100 bases:
>100_bases TTTTGGTAACGCGAAACGGCTAAAATCATAATAAAACCTTAACAATACAGCGCAATATCATAGTGCTAGAGTTTGTCTCA TAAATCCATAGGGAGATTTT
Downstream 100 bases:
>100_bases TTTAGCCACGTGAGTAAAAGCCAACTTAGAAAACTTTCTGAATTCACATCCGCCGACCACCCGGTCCGGCGGATGCGTCG TTTAAGGGAGAGAGCCATCG
Product: periplasmic phosphate-binding protein of ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLTNFVVSLSVVMGAALAHAQAPVIKIDGSSTVFPITEAMAEEFQTSQRGKVRVTVGISGTGGGFKKFCRGETDVQNASR PIQASEIEACRKAGIKFLELPVAYDATAVVVNPKNTWLKSITVADLKKMWEPGAQGKINTWADVNPAWPKEKLKLYGAGS DSGTFDYFTEAVVGKSKSSRGDYTASEDDNTLVTGVSNDLYALGYVPLAYYEENKGKLKVVAIVGGDKAPKKNEAVLPGR ETVENGSYFPLSRPIFIYVSEKSMAKPEVKEFINFYIGKSFEIVPQVKYVPLPAKAYDMVKENVKKNKLGTVFGGHSEVG LKIEELMKREGSL
Sequences:
>Translated_333_residues MLTNFVVSLSVVMGAALAHAQAPVIKIDGSSTVFPITEAMAEEFQTSQRGKVRVTVGISGTGGGFKKFCRGETDVQNASR PIQASEIEACRKAGIKFLELPVAYDATAVVVNPKNTWLKSITVADLKKMWEPGAQGKINTWADVNPAWPKEKLKLYGAGS DSGTFDYFTEAVVGKSKSSRGDYTASEDDNTLVTGVSNDLYALGYVPLAYYEENKGKLKVVAIVGGDKAPKKNEAVLPGR ETVENGSYFPLSRPIFIYVSEKSMAKPEVKEFINFYIGKSFEIVPQVKYVPLPAKAYDMVKENVKKNKLGTVFGGHSEVG LKIEELMKREGSL >Mature_333_residues MLTNFVVSLSVVMGAALAHAQAPVIKIDGSSTVFPITEAMAEEFQTSQRGKVRVTVGISGTGGGFKKFCRGETDVQNASR PIQASEIEACRKAGIKFLELPVAYDATAVVVNPKNTWLKSITVADLKKMWEPGAQGKINTWADVNPAWPKEKLKLYGAGS DSGTFDYFTEAVVGKSKSSRGDYTASEDDNTLVTGVSNDLYALGYVPLAYYEENKGKLKVVAIVGGDKAPKKNEAVLPGR ETVENGSYFPLSRPIFIYVSEKSMAKPEVKEFINFYIGKSFEIVPQVKYVPLPAKAYDMVKENVKKNKLGTVFGGHSEVG LKIEELMKREGSL
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36229; Mature: 36229
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNFVVSLSVVMGAALAHAQAPVIKIDGSSTVFPITEAMAEEFQTSQRGKVRVTVGISG CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEEEEEC TGGGFKKFCRGETDVQNASRPIQASEIEACRKAGIKFLELPVAYDATAVVVNPKNTWLKS CCCHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCHHHHH ITVADLKKMWEPGAQGKINTWADVNPAWPKEKLKLYGAGSDSGTFDYFTEAVVGKSKSSR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC GDYTASEDDNTLVTGVSNDLYALGYVPLAYYEENKGKLKVVAIVGGDKAPKKNEAVLPGR CCCCCCCCCCEEEEECCCCEEEEECEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC ETVENGSYFPLSRPIFIYVSEKSMAKPEVKEFINFYIGKSFEIVPQVKYVPLPAKAYDMV HHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCEEEECCCHHHHHHH KENVKKNKLGTVFGGHSEVGLKIEELMKREGSL HHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MLTNFVVSLSVVMGAALAHAQAPVIKIDGSSTVFPITEAMAEEFQTSQRGKVRVTVGISG CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEEEEEC TGGGFKKFCRGETDVQNASRPIQASEIEACRKAGIKFLELPVAYDATAVVVNPKNTWLKS CCCHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCHHHHH ITVADLKKMWEPGAQGKINTWADVNPAWPKEKLKLYGAGSDSGTFDYFTEAVVGKSKSSR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC GDYTASEDDNTLVTGVSNDLYALGYVPLAYYEENKGKLKVVAIVGGDKAPKKNEAVLPGR CCCCCCCCCCEEEEECCCCEEEEECEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC ETVENGSYFPLSRPIFIYVSEKSMAKPEVKEFINFYIGKSFEIVPQVKYVPLPAKAYDMV HHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCEEEECCCHHHHHHH KENVKKNKLGTVFGGHSEVGLKIEELMKREGSL HHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]