| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523116
Identifier: 42523116
GI number: 42523116
Start: 1543927
End: 1545129
Strand: Direct
Name: 42523116
Synonym: Bd1612
Alternate gene names: NA
Gene position: 1543927-1545129 (Clockwise)
Preceding gene: 42523115
Following gene: 42523118
Centisome position: 40.81
GC content: 49.21
Gene sequence:
>1203_bases ATGGGCGCAAGCAATCATCATGTGAATCTGCATGTATCGAAATTTGAAGCTCCAGCGAAATTGAAAACGCTGAGCTTCGC CCTGATCGCGATCGGTCTTTTGACTTTCGTGATCGGTCTTATGAAAAATCAGGACAGATTGTGGACTTCTTATCTGGTGT CCTATTTCTACTTCTCTTGCCTGGCCTTGAGTGGTTTGTTCTGGATCGTTATCAACAACGTGGCTAAAGCCGGCTGGTCC GTGTCCATCCGTCGTTATGCTGAAGCAACTACGTCCTTCCTTCCGGCGATTCTAATCGGTGGTTTGGTTCTGTTGGTTGG TTTCAAGCACCTTTACCCTTGGGCGAACCCAGAGGTGGTGGCTGCAAATCCGGTGATCGCGGCGAAAACCGGCTACCTGA ACATGGGTGGCTTCGTGATTCGTCTGTTCATCTTTGCGGTCGGCTGCATGATCTTCCGTCATGTGATCGTGGGCAACTCT TTGAAACAGGACAAGTCCGGTGACGAGTCTTTGACGACGAAGTCTGTGGCTCCGTCTGTTGGTTTCATCGTGTTCTACGC TTTGATGTTCTCTTTGTTCTGCGTGGATCTGTTGATGTCCTTGCTGCCAACTTGGTATTCCACCATCTTTGGTATCTATG GCTTCTCTGGTATGTTCCAGGCGGGCATGGCATTCCTGGCGATCGTTATCGTTTTGATGAGACGCTCTGGTTTGGTTAAA GGTTATGTGACTGAAGAGCACCAGCACGACGTGGTGAAATACCTTAAAGGTTTCTCCATTTTCTGGGCTTACATTGCGTT CTCTCAGTTCATGTTGATCTGGTACGCTAACATCCCTGAGGAAACTGAGTACTACATCGCGCGTGCTCAAGGCGGCTGGA TGAGCATCTCCATGGCTCTTCTGATCTTCCGTTTCGTGGTTCCGTTCCTGGCACTTTTGCCTCGTGGAATGAAACGCAAC GACAACAACGTGTTGTTGATCTCTGTCTTGGTATTGGTAATGCAATACGTGGACATCTACTGGATGGTTTACCCGAACTT CTTCGACGGTCACGTGACCTTCGGATTCTGGGAAATCGGCATCTTCGCTGGTTTCGCGGGTGCGTTCCTTCTGACAATCA TGTCCTTCTGGTCTAAGCACTCTTTGGTTCCGTTGAAAGACCCAAGAATGCACGAAGCGCTGAACCACCACGTTGCTTAC TAA
Upstream 100 bases:
>100_bases GTGATGGGTCCTTATGCTTCCCACATTCCTCAGCAGTACCGCTGGCAGGTTGTTAACTATATCCGCTTCCTAGAGAAGCA AGAAGCTAAGTAGGTTGTAA
Downstream 100 bases:
>100_bases GTAGCACGTGGTCGGCTGACGGAGTGGGGGCCATGGCCCTCAAAACGCTCAGACAGTCCTCGCACAAAGGGAGCCTATCT TGGCTCCCTTTTTTTATTCT
Product: putative molybdopterin oxidoreductase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MGASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSCLALSGLFWIVINNVAKAGWS VSIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVVAANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNS LKQDKSGDESLTTKSVAPSVGFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVK GYVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMALLIFRFVVPFLALLPRGMKRN DNNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIGIFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY
Sequences:
>Translated_400_residues MGASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSCLALSGLFWIVINNVAKAGWS VSIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVVAANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNS LKQDKSGDESLTTKSVAPSVGFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVK GYVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMALLIFRFVVPFLALLPRGMKRN DNNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIGIFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY >Mature_399_residues GASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSCLALSGLFWIVINNVAKAGWSV SIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVVAANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNSL KQDKSGDESLTTKSVAPSVGFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVKG YVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMALLIFRFVVPFLALLPRGMKRND NNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIGIFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45119; Mature: 44988
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSC CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LALSGLFWIVINNVAKAGWSVSIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE AANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNSLKQDKSGDESLTTKSVAPSV ECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHH GFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE GYVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCHHHHHHHH LIFRFVVPFLALLPRGMKRNDNNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIG HHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH IFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure GASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSC CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LALSGLFWIVINNVAKAGWSVSIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE AANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNSLKQDKSGDESLTTKSVAPSV ECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHH GFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE GYVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCHHHHHHHH LIFRFVVPFLALLPRGMKRNDNNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIG HHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH IFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA