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The map label for this gene is nrfI [H]

Identifier: 42523110

GI number: 42523110

Start: 1535947

End: 1537587

Strand: Direct

Name: nrfI [H]

Synonym: Bd1606

Alternate gene names: 42523110

Gene position: 1535947-1537587 (Clockwise)

Preceding gene: 42523109

Following gene: 42523111

Centisome position: 40.6

GC content: 52.29

Gene sequence:

>1641_bases
ATGAAAAAAATATTTCTCATCATTGCTTCATTGTTGGTGACTTGTGCCGCTGTGGCCAAGCCCGGTGATCTGCTGAAATC
CATGCCGGTTCAGGACGGCGGTCGTATCAAGCCTTACGACAGCTTTGCCAAAGAAATGCTGGAAATCGTCTATGGCAAAA
CCAAATTCGAGGGCCGCAATGCCACCGAAATCGTTTTGACCTGGATGCTGTCTCCGCAGGCGTGGGAAGGCAAAAAAATC
TTTGAAGTGCGCAACCACCAGGTTCTGCAGGCGATGAATCTTCCGAAAGACCAGCGCTATTTCAACGGTGAAGAGCTTTT
TGCCAACGAAAGATTCACCCTGCTTCGTCAGGAACTTCAGGCCAAGCGTGAAACCAAAGAAAAGCTGGATCCGTACTTCC
AGGCTTTGCAGCGTTTGGAAAACCAGTTCTTTGTATTTCAGGAAATCGCAGCCGGCCGTATGCTGAAGGTCGCTCCTCCT
AAAGAAGGGGACACGTGGCTGGCGGTGGCGGATTTGCCAGAGCATCTTCAGGCGAAATTCCTGGATGTGACCAAAGCCTT
TGTGACTTATCTGGGTGTGATCGCGGAAAAAGGGGACTCTTCTGTTTCCGGCAAAGCTCTGGATGAAGCCGTGGCGGCCT
TTGAAACGGCGGCGCAGGCGGAAAATCCGGCATTGTACAGCCTGGGTGGTAAAATCACGGCAGAGGTTCACTATAACTCC
TTCCATCCGTTCCGTTGGGCGTATGTGTTCTATTTCCTGGCATTCCTTGTGTTGTTGCTGGTGTGGGCTTTGAGCAAAGA
GTCCCTGATGACGGCGGCGTGGGTGCTGTTGGGCATTGGTTTTGCGCTGAACACTTATGGATTTGGTTTGCGCATGTACA
TCATGGACCGTGCGCCGGTATCCAATATGTATGAAACAGTTGTCTGGGTTGCCTGGGGAACTGTGTTGTTTGCGGCGATT
TTGGAAATCATTTACAAGTACCGGTTGATTCTGGTGGCCGGGACTTTGGTGGCTGCCTTTGGTCTGGTGATCGCGGACTT
TGCGCCGGCAGTTTTGGATCCTTCCTTGCAGCCGCTGGAGCCGGTTTTGCGCAGCAACTACTGGCTGACGATCCACGTGA
TGACAATCACTATCAGTTATGCGGCCTTCTTCCTGGCGTTCGGGTTGGGTGATTTGGGATTGATCTATTATCTGCGTGGG
GAAGAAAAGCACCAGGCGCAGATCAAAGCCATCACCACCAGCATCTATCGCGCTATGCAGATTGGTGTCGCGTTCCTGGC
TCCGGGGATCATCCTTGGTGGTATCTGGGCGGATTACTCTTGGGGCCGTTTCTGGGGTTGGGACCCAAAAGAAACTTGGG
CTTTGATCGCGCTGCTGGGTTATCTGGCGGTGTTGCATGCGCGCTACGCAGGCATGTTGAAGCATTTCGGAATGGTAGTG
ACAGCGGTTATCACTTTCTCGTTGGTGATCATGGCGTGGTACGGAGTGAACTTCGTACTTGGCGCGGGGCTCCATTCCTA
CGGCTTCGGTGCTGGTGGGGTTGAGTATGTGTCTGCTTTCGTGGCAGCGCACATGCTGTTAGTGGTTTATGTGAGTGTGA
TTAGACAAGGCAGAGGGAAGAAGGCGACGAAAGAGTCTTAA

Upstream 100 bases:

>100_bases
TGGGCTCATTGGTGCTTTCATTGGGTATCGTGCTGTTAATGTGGTTTAAACATCTGGACTTCAAACTTGCCCGTAAAACG
GGAGCAGGGACGAAAGAATC

Downstream 100 bases:

>100_bases
ATTTGGTGTGCACACTTTTTGAGCGGACGGGTCCGAGTTTCTCTCTTTTTCAATATGCTTGCAAAAAGAATATGGACAAC
TGGACTTTTCCACCATTAAA

Product: cytochrome C-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MKKIFLIIASLLVTCAAVAKPGDLLKSMPVQDGGRIKPYDSFAKEMLEIVYGKTKFEGRNATEIVLTWMLSPQAWEGKKI
FEVRNHQVLQAMNLPKDQRYFNGEELFANERFTLLRQELQAKRETKEKLDPYFQALQRLENQFFVFQEIAAGRMLKVAPP
KEGDTWLAVADLPEHLQAKFLDVTKAFVTYLGVIAEKGDSSVSGKALDEAVAAFETAAQAENPALYSLGGKITAEVHYNS
FHPFRWAYVFYFLAFLVLLLVWALSKESLMTAAWVLLGIGFALNTYGFGLRMYIMDRAPVSNMYETVVWVAWGTVLFAAI
LEIIYKYRLILVAGTLVAAFGLVIADFAPAVLDPSLQPLEPVLRSNYWLTIHVMTITISYAAFFLAFGLGDLGLIYYLRG
EEKHQAQIKAITTSIYRAMQIGVAFLAPGIILGGIWADYSWGRFWGWDPKETWALIALLGYLAVLHARYAGMLKHFGMVV
TAVITFSLVIMAWYGVNFVLGAGLHSYGFGAGGVEYVSAFVAAHMLLVVYVSVIRQGRGKKATKES

Sequences:

>Translated_546_residues
MKKIFLIIASLLVTCAAVAKPGDLLKSMPVQDGGRIKPYDSFAKEMLEIVYGKTKFEGRNATEIVLTWMLSPQAWEGKKI
FEVRNHQVLQAMNLPKDQRYFNGEELFANERFTLLRQELQAKRETKEKLDPYFQALQRLENQFFVFQEIAAGRMLKVAPP
KEGDTWLAVADLPEHLQAKFLDVTKAFVTYLGVIAEKGDSSVSGKALDEAVAAFETAAQAENPALYSLGGKITAEVHYNS
FHPFRWAYVFYFLAFLVLLLVWALSKESLMTAAWVLLGIGFALNTYGFGLRMYIMDRAPVSNMYETVVWVAWGTVLFAAI
LEIIYKYRLILVAGTLVAAFGLVIADFAPAVLDPSLQPLEPVLRSNYWLTIHVMTITISYAAFFLAFGLGDLGLIYYLRG
EEKHQAQIKAITTSIYRAMQIGVAFLAPGIILGGIWADYSWGRFWGWDPKETWALIALLGYLAVLHARYAGMLKHFGMVV
TAVITFSLVIMAWYGVNFVLGAGLHSYGFGAGGVEYVSAFVAAHMLLVVYVSVIRQGRGKKATKES
>Mature_546_residues
MKKIFLIIASLLVTCAAVAKPGDLLKSMPVQDGGRIKPYDSFAKEMLEIVYGKTKFEGRNATEIVLTWMLSPQAWEGKKI
FEVRNHQVLQAMNLPKDQRYFNGEELFANERFTLLRQELQAKRETKEKLDPYFQALQRLENQFFVFQEIAAGRMLKVAPP
KEGDTWLAVADLPEHLQAKFLDVTKAFVTYLGVIAEKGDSSVSGKALDEAVAAFETAAQAENPALYSLGGKITAEVHYNS
FHPFRWAYVFYFLAFLVLLLVWALSKESLMTAAWVLLGIGFALNTYGFGLRMYIMDRAPVSNMYETVVWVAWGTVLFAAI
LEIIYKYRLILVAGTLVAAFGLVIADFAPAVLDPSLQPLEPVLRSNYWLTIHVMTITISYAAFFLAFGLGDLGLIYYLRG
EEKHQAQIKAITTSIYRAMQIGVAFLAPGIILGGIWADYSWGRFWGWDPKETWALIALLGYLAVLHARYAGMLKHFGMVV
TAVITFSLVIMAWYGVNFVLGAGLHSYGFGAGGVEYVSAFVAAHMLLVVYVSVIRQGRGKKATKES

Specific function: May play a role in cytochrome c biogenesis and may be required for maturation of the NrfA protein [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR007816 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm; PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 60977; Mature: 60977

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFLIIASLLVTCAAVAKPGDLLKSMPVQDGGRIKPYDSFAKEMLEIVYGKTKFEGRN
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
ATEIVLTWMLSPQAWEGKKIFEVRNHQVLQAMNLPKDQRYFNGEELFANERFTLLRQELQ
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHCCHHHHHHHHHHH
AKRETKEKLDPYFQALQRLENQFFVFQEIAAGRMLKVAPPKEGDTWLAVADLPEHLQAKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCHHHHHHH
LDVTKAFVTYLGVIAEKGDSSVSGKALDEAVAAFETAAQAENPALYSLGGKITAEVHYNS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEECC
FHPFRWAYVFYFLAFLVLLLVWALSKESLMTAAWVLLGIGFALNTYGFGLRMYIMDRAPV
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH
SNMYETVVWVAWGTVLFAAILEIIYKYRLILVAGTLVAAFGLVIADFAPAVLDPSLQPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
PVLRSNYWLTIHVMTITISYAAFFLAFGLGDLGLIYYLRGEEKHQAQIKAITTSIYRAMQ
HHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
IGVAFLAPGIILGGIWADYSWGRFWGWDPKETWALIALLGYLAVLHARYAGMLKHFGMVV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVITFSLVIMAWYGVNFVLGAGLHSYGFGAGGVEYVSAFVAAHMLLVVYVSVIRQGRGK
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KATKES
CCCCCC
>Mature Secondary Structure
MKKIFLIIASLLVTCAAVAKPGDLLKSMPVQDGGRIKPYDSFAKEMLEIVYGKTKFEGRN
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
ATEIVLTWMLSPQAWEGKKIFEVRNHQVLQAMNLPKDQRYFNGEELFANERFTLLRQELQ
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHCCHHHHHHHHHHH
AKRETKEKLDPYFQALQRLENQFFVFQEIAAGRMLKVAPPKEGDTWLAVADLPEHLQAKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCHHHHHHH
LDVTKAFVTYLGVIAEKGDSSVSGKALDEAVAAFETAAQAENPALYSLGGKITAEVHYNS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEECC
FHPFRWAYVFYFLAFLVLLLVWALSKESLMTAAWVLLGIGFALNTYGFGLRMYIMDRAPV
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH
SNMYETVVWVAWGTVLFAAILEIIYKYRLILVAGTLVAAFGLVIADFAPAVLDPSLQPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
PVLRSNYWLTIHVMTITISYAAFFLAFGLGDLGLIYYLRGEEKHQAQIKAITTSIYRAMQ
HHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
IGVAFLAPGIILGGIWADYSWGRFWGWDPKETWALIALLGYLAVLHARYAGMLKHFGMVV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVITFSLVIMAWYGVNFVLGAGLHSYGFGAGGVEYVSAFVAAHMLLVVYVSVIRQGRGK
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KATKES
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]