| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523044
Identifier: 42523044
GI number: 42523044
Start: 1460581
End: 1461387
Strand: Direct
Name: 42523044
Synonym: Bd1537
Alternate gene names: NA
Gene position: 1460581-1461387 (Clockwise)
Preceding gene: 42523035
Following gene: 42523045
Centisome position: 38.61
GC content: 48.2
Gene sequence:
>807_bases ATGCTGGATATTTATAATTACGATGACTACAGGCTGTTCTTTAAGGATGTACTTCAATCACAAGAGCGGACTGACAAGAA GTACCGCGGAAGATTGGTTGAAGCGATGCGAATCAGCACCTCGTTGTTTTCGCAGATTCTGAAAGGTGAAAAAAATCTTT CTTCTGAACAGGGCTTGGAGGCCGCAGCCTTCTTTGGTTTTGGTGACAAAGAAACGGATGTCTTTATGCTGATGATCGAG CTGGGGCGGGCGGGTTCCGTCAAGCTGCAGGCGCGGCTTAAAGACAAGATCCAGATCCTGCAGTCCGAAGCCAAGTCCAT CAGTGCCCGGGTTCCCAAGGATGTTGTCCTGAGTGATGTCGACAAAGCCACCTACTATTCCTCCTGGCTCTATACTGGTG TCAGGAATCTGCTGCCAACCCCCGCAGGAAAGGAACTGAAAACCATCGCTGAAAAACTGGGTGTGCCTTTGGAAAAAGTG GACACGGCCATTCAGTTTCTGATTGAAGTGGGCCTGTGCGAAAGAAAGAATGGACAGCTTTATTACAAGCAGGGGTTCAC TCATCTTGATTCAACCCATCCGATGATTCTAAGGCATCACCAGAACTGGCGTCAGCGAGCCATTGCAAAGATGGATTTTT ACAAAGACCCCCATGTCCATTATACAAGTCCCATGTCTTTGTCCGCCGAAGGGGCTCAGAAGATCCGGGATTATCTTCGC GCAAACATTAAGGAAATCATCAACTTGTCGCGCGAGGGAAACCCTGAGATCGGCTATTGCCTTAATATAGACTGGTACGA ATACTGA
Upstream 100 bases:
>100_bases GGTCGCGAAATCTCATTGTGAGACAGGAGTAAGGTCTTGATTTTTGACACGGAAATCGAAAAACAGGTCGGGCTTTGTTT ACCGTTAGTAAACTGGGGGC
Downstream 100 bases:
>100_bases CTTTACCAAAAGTAAACTGAAACCCGGCCGTTTTAACCAACCGGACTTCGCGGAATTTTTCTGGATTCTGTAAAAAGCTT CTCATGCGAACTGAATCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLDIYNYDDYRLFFKDVLQSQERTDKKYRGRLVEAMRISTSLFSQILKGEKNLSSEQGLEAAAFFGFGDKETDVFMLMIE LGRAGSVKLQARLKDKIQILQSEAKSISARVPKDVVLSDVDKATYYSSWLYTGVRNLLPTPAGKELKTIAEKLGVPLEKV DTAIQFLIEVGLCERKNGQLYYKQGFTHLDSTHPMILRHHQNWRQRAIAKMDFYKDPHVHYTSPMSLSAEGAQKIRDYLR ANIKEIINLSREGNPEIGYCLNIDWYEY
Sequences:
>Translated_268_residues MLDIYNYDDYRLFFKDVLQSQERTDKKYRGRLVEAMRISTSLFSQILKGEKNLSSEQGLEAAAFFGFGDKETDVFMLMIE LGRAGSVKLQARLKDKIQILQSEAKSISARVPKDVVLSDVDKATYYSSWLYTGVRNLLPTPAGKELKTIAEKLGVPLEKV DTAIQFLIEVGLCERKNGQLYYKQGFTHLDSTHPMILRHHQNWRQRAIAKMDFYKDPHVHYTSPMSLSAEGAQKIRDYLR ANIKEIINLSREGNPEIGYCLNIDWYEY >Mature_268_residues MLDIYNYDDYRLFFKDVLQSQERTDKKYRGRLVEAMRISTSLFSQILKGEKNLSSEQGLEAAAFFGFGDKETDVFMLMIE LGRAGSVKLQARLKDKIQILQSEAKSISARVPKDVVLSDVDKATYYSSWLYTGVRNLLPTPAGKELKTIAEKLGVPLEKV DTAIQFLIEVGLCERKNGQLYYKQGFTHLDSTHPMILRHHQNWRQRAIAKMDFYKDPHVHYTSPMSLSAEGAQKIRDYLR ANIKEIINLSREGNPEIGYCLNIDWYEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30921; Mature: 30921
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDIYNYDDYRLFFKDVLQSQERTDKKYRGRLVEAMRISTSLFSQILKGEKNLSSEQGLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC AAAFFGFGDKETDVFMLMIELGRAGSVKLQARLKDKIQILQSEAKSISARVPKDVVLSDV EEEEECCCCCCCHHEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DKATYYSSWLYTGVRNLLPTPAGKELKTIAEKLGVPLEKVDTAIQFLIEVGLCERKNGQL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCE YYKQGFTHLDSTHPMILRHHQNWRQRAIAKMDFYKDPHVHYTSPMSLSAEGAQKIRDYLR EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHH ANIKEIINLSREGNPEIGYCLNIDWYEY HHHHHHHHHCCCCCCCEEEEEECCEECC >Mature Secondary Structure MLDIYNYDDYRLFFKDVLQSQERTDKKYRGRLVEAMRISTSLFSQILKGEKNLSSEQGLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC AAAFFGFGDKETDVFMLMIELGRAGSVKLQARLKDKIQILQSEAKSISARVPKDVVLSDV EEEEECCCCCCCHHEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DKATYYSSWLYTGVRNLLPTPAGKELKTIAEKLGVPLEKVDTAIQFLIEVGLCERKNGQL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCE YYKQGFTHLDSTHPMILRHHQNWRQRAIAKMDFYKDPHVHYTSPMSLSAEGAQKIRDYLR EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHH ANIKEIINLSREGNPEIGYCLNIDWYEY HHHHHHHHHCCCCCCCEEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA