Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523024

Identifier: 42523024

GI number: 42523024

Start: 1440626

End: 1440970

Strand: Direct

Name: 42523024

Synonym: Bd1517

Alternate gene names: NA

Gene position: 1440626-1440970 (Clockwise)

Preceding gene: 42523021

Following gene: 42523027

Centisome position: 38.08

GC content: 50.72

Gene sequence:

>345_bases
ATGAAAAAGTGGATCTTGTTTTCTTTGATGTCAGTTGTTGCGTCCTCAGCTTTGGCGGATGGAACGATCACCTGCAAAGG
ATTTGATGCTGACAAGAACAAGGCCGAGGATGTGCTGATGATCGAGGCGGACATCGCGATTCTTCTGACGGCCTCCAACA
ACGAAGGCTTCTTGTCTCCACGCTGGCAAAACGGTCAGGTGAAAGATTATGCCAATGATCTGTATGTTGTCACCGTGGAT
CGTCAGGCGAATACCATCACAACCGACGATCTTCGCAGTGGCACCCGGAAAGTTCACACGGATGCCAAGTGCCGCTATAA
CGGGGAGCCTGACGAAGGCTACTAA

Upstream 100 bases:

>100_bases
CCTGTTTAACAGGGATGGGGGCTTCATAAGTAAATTAAACCACTTTGCGCGGGCAAGGGCCTTGCAACAAAGGGTGGGTG
CTTAAATATTTGGAGGCTTT

Downstream 100 bases:

>100_bases
AGAGATCGTTGCAAAGGGCTTTGCAGGACGGGCCAGGTCGATTTCAGGATCACAGGACGTCCTTTGAACACCAACACGCC
AAAGGTTCCATAGTGTGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKKWILFSLMSVVASSALADGTITCKGFDADKNKAEDVLMIEADIAILLTASNNEGFLSPRWQNGQVKDYANDLYVVTVD
RQANTITTDDLRSGTRKVHTDAKCRYNGEPDEGY

Sequences:

>Translated_114_residues
MKKWILFSLMSVVASSALADGTITCKGFDADKNKAEDVLMIEADIAILLTASNNEGFLSPRWQNGQVKDYANDLYVVTVD
RQANTITTDDLRSGTRKVHTDAKCRYNGEPDEGY
>Mature_114_residues
MKKWILFSLMSVVASSALADGTITCKGFDADKNKAEDVLMIEADIAILLTASNNEGFLSPRWQNGQVKDYANDLYVVTVD
RQANTITTDDLRSGTRKVHTDAKCRYNGEPDEGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12623; Mature: 12623

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWILFSLMSVVASSALADGTITCKGFDADKNKAEDVLMIEADIAILLTASNNEGFLSP
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCEEEEEEECCCCCEECC
RWQNGQVKDYANDLYVVTVDRQANTITTDDLRSGTRKVHTDAKCRYNGEPDEGY
CCCCCCCCCCCCCEEEEEECCCCCEEECHHHCCCCEEECCCCEEEECCCCCCCC
>Mature Secondary Structure
MKKWILFSLMSVVASSALADGTITCKGFDADKNKAEDVLMIEADIAILLTASNNEGFLSP
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCEEEEEEECCCCCEECC
RWQNGQVKDYANDLYVVTVDRQANTITTDDLRSGTRKVHTDAKCRYNGEPDEGY
CCCCCCCCCCCCCEEEEEECCCCCEEECHHHCCCCEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA