| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is aroE
Identifier: 42523015
GI number: 42523015
Start: 1429087
End: 1429920
Strand: Direct
Name: aroE
Synonym: Bd1508
Alternate gene names: NA
Gene position: 1429087-1429920 (Clockwise)
Preceding gene: 42523014
Following gene: 42523016
Centisome position: 37.78
GC content: 53.48
Gene sequence:
>834_bases ATGAGCATCCTCATTCGTGAGATTCGTGCTGATGGCACGCCCGGACAGTTCATGCGTTTTATGCAGACCCTTGCCGGCGA AAAAGGCTGGGACTGGCAGTTCGAGACCGTGAGTGATTTTTCTGCTGAGGTTTTTCAAGGAGCCGCCGCGGTCAAAGTGG CCTCCTCGTTGTCCGGTGAAATTCTGCCGCAGATGAAAGTGTTGCCCACGCAGGTGCGTGCGGTGCAGGTTCTGGATTCG TTCTTCCCTGAAGAGGGCTCCTGGTATCCGCGCATTTTGCTGCATGAGGCTTTGCGTATGGTGCTGGTTTCAGAGGCTCG CGATCTTGATATTCGCACGCCGGCTTTTGTGATCGGTCACGGTGAAGAAGCCCGTGTTGTGGCCTCGGTTCTGGCGCTGA TGGGGATTTCAGATATTTATCTTGTCGGAGAATCCGCGGGACTGGAAGAGCATCAGCAGTCGTTGATGAGGTCTCACCTG GGGATTCGTTTTCATATTCTGCCCATTGACGAACTGACGATGCAGGCGGTGAGTGCTGGCATCGTGGTGAACACTGTGGA TTTGTCAGGCCAGCAGGCGTTGCTGACAGACCTGTCTTATTTTAACTATATGAAGGGCACGGGTTACGCCCTGGACCTGA ATCTGCTGCCGCTGCAAAATCTTTTGCTGGAAGAAGCTGAAAAAGCAGAGCTGCGTGTGCTGCATCCGGTGTTGGTGGCT GAAGCACTGACCCGGCTGTGGTTGGAACGTCTGCGTCCGGATCATAATTTGAGTCATGAGGATATTCGCGAAAGCTGGAC CCGCTTTTTGAAACAAAACTCATCCTCGGTCTAG
Upstream 100 bases:
>100_bases TATCTGTTAAAGTTTCTGCGCGACGAAAAGAAGTTCTCGGGCATCGAAGAACTGAAAAACCAGATTCAAAACGACATGGC CGAAGCCAGAAAGTATTTTG
Downstream 100 bases:
>100_bases TTACAAAAAATGGCACCCTGGAGTAAAGTGAGTCCAGGGGAGTCCTAATGTCTTCACTCAAAATCGGGGAAATTCTAGTC AAGCAAGGTTTGCTCAAGCC
Product: hypothetical protein
Products: 3-dehydroshikimate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSILIREIRADGTPGQFMRFMQTLAGEKGWDWQFETVSDFSAEVFQGAAAVKVASSLSGEILPQMKVLPTQVRAVQVLDS FFPEEGSWYPRILLHEALRMVLVSEARDLDIRTPAFVIGHGEEARVVASVLALMGISDIYLVGESAGLEEHQQSLMRSHL GIRFHILPIDELTMQAVSAGIVVNTVDLSGQQALLTDLSYFNYMKGTGYALDLNLLPLQNLLLEEAEKAELRVLHPVLVA EALTRLWLERLRPDHNLSHEDIRESWTRFLKQNSSSV
Sequences:
>Translated_277_residues MSILIREIRADGTPGQFMRFMQTLAGEKGWDWQFETVSDFSAEVFQGAAAVKVASSLSGEILPQMKVLPTQVRAVQVLDS FFPEEGSWYPRILLHEALRMVLVSEARDLDIRTPAFVIGHGEEARVVASVLALMGISDIYLVGESAGLEEHQQSLMRSHL GIRFHILPIDELTMQAVSAGIVVNTVDLSGQQALLTDLSYFNYMKGTGYALDLNLLPLQNLLLEEAEKAELRVLHPVLVA EALTRLWLERLRPDHNLSHEDIRESWTRFLKQNSSSV >Mature_276_residues SILIREIRADGTPGQFMRFMQTLAGEKGWDWQFETVSDFSAEVFQGAAAVKVASSLSGEILPQMKVLPTQVRAVQVLDSF FPEEGSWYPRILLHEALRMVLVSEARDLDIRTPAFVIGHGEEARVVASVLALMGISDIYLVGESAGLEEHQQSLMRSHLG IRFHILPIDELTMQAVSAGIVVNTVDLSGQQALLTDLSYFNYMKGTGYALDLNLLPLQNLLLEEAEKAELRVLHPVLVAE ALTRLWLERLRPDHNLSHEDIRESWTRFLKQNSSSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.1.1.25
Molecular weight: Translated: 31025; Mature: 30894
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILIREIRADGTPGQFMRFMQTLAGEKGWDWQFETVSDFSAEVFQGAAAVKVASSLSGE CCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCC ILPQMKVLPTQVRAVQVLDSFFPEEGSWYPRILLHEALRMVLVSEARDLDIRTPAFVIGH CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC GEEARVVASVLALMGISDIYLVGESAGLEEHQQSLMRSHLGIRFHILPIDELTMQAVSAG CCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCC IVVNTVDLSGQQALLTDLSYFNYMKGTGYALDLNLLPLQNLLLEEAEKAELRVLHPVLVA EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH EALTRLWLERLRPDHNLSHEDIRESWTRFLKQNSSSV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SILIREIRADGTPGQFMRFMQTLAGEKGWDWQFETVSDFSAEVFQGAAAVKVASSLSGE CHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCC ILPQMKVLPTQVRAVQVLDSFFPEEGSWYPRILLHEALRMVLVSEARDLDIRTPAFVIGH CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC GEEARVVASVLALMGISDIYLVGESAGLEEHQQSLMRSHLGIRFHILPIDELTMQAVSAG CCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCC IVVNTVDLSGQQALLTDLSYFNYMKGTGYALDLNLLPLQNLLLEEAEKAELRVLHPVLVA EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH EALTRLWLERLRPDHNLSHEDIRESWTRFLKQNSSSV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: shikimate; NADP+
Specific reaction: shikimate + NADP+ = 3-dehydroshikimate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA