Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523008

Identifier: 42523008

GI number: 42523008

Start: 1420286

End: 1421422

Strand: Direct

Name: 42523008

Synonym: Bd1501

Alternate gene names: NA

Gene position: 1420286-1421422 (Clockwise)

Preceding gene: 42523007

Following gene: 42523010

Centisome position: 37.54

GC content: 49.96

Gene sequence:

>1137_bases
ATGCTTCTTGGCGTATTCGTTTCTTTGCTTTTGGTTTCCTGTTCGACTTCATTTTTGAAGTACGAAAAAGCTGACCAGCT
GAAAAAAAACGAGGAGTTCGAAGGAGCGGTGACGATTGTAAAGCCGCAGTCGGAAAGCCCACCAGAGACAGCGCCTGCAG
AGCCGGCCCAAGCAGGCAAAGACACCAAAGCTGCTTCCCAACCAGCTACGAAATCCACGGCCAAAACAACAGCCAAAAGT
TCCACTCAAACAACTGACAAGACCGCTGCCAAAGCGCCTGTGAAGGCGTCGGAAAAAACAGCCGTTGCTCCCGCAGTAAA
AGCTCCCTCCAAGGCATCCAAGTCTGCTGCCAAAACAGAAGCCGCGACGGCACAGGCCCCGGTGCGTCAGCCTGATATCG
AAGATTCAGAAGGGTTCAACGGTCGCCGTCCGGTGAATGACCCTTTCCGCGTGGGTGAAGAAGTGGTGCACGACGTGCAT
TATTTCAAAGTCTCTGCCGGGGAGCTTCGCATGAAAGTGGAGCCCTTTGCCATGGTCAACAACCGCAAGTCCTACACTTT
CGCGGTGGAAATCCGCACCAGTCCTCTGTTCAGTTCCTTCTATAGCGTTGAAGACCGTGTAGAGACCTTTGTCGATTACG
AAGACCTGGTGCCGCGTGTGTTTCAATTGCACGTGAAGGAATCCGGTCAGTTGCGTGAAGCCAAGATGCTCTTTGATGTC
GAGAAAAACACGGCGACCTTCTGGGAAAAGAAGGTGACCAAGGACCACGGCGAAGAAGAGAAAAAGCAGAACTGGGAAAT
TCTGCCGTACACCCAAAACGTTTACAGCGCGATTTACTATATGCGAAATTTCAAATGGGAAACGGGCAAAGAGTATTCCT
TCCGCGTCGGTAACGACAACGAGAATCTTGTGTTTTCCGGAAAAGCCCTGCGCCGTGAAGTCCTGAACACCAAGCTGGGA
CCCATTAAAGCCATCGTGGTTCAGCCTAAAATCACTCTCAAAGGCAAATTGAACCCGATCGGGGACAATTTCATCTGGTT
GTCGGATGATGATCGCAAGTATATCTTGAGAATTGAATCCAAAATCAAAATCGGAACATTGGTTTCTGAAGTCGTAGAAA
TTAAACCCGGCAAGTAA

Upstream 100 bases:

>100_bases
CACAAAGCTATTGCGACAAGTTGGAAGAGATCGTCAGAAAGCACCCGGAACAATGGATGTGGGTGCATCGACGGTGGAAG
GATTTCCGGTGAACTTTAAA

Downstream 100 bases:

>100_bases
TTAGCGTTTGCGGTCCGCTTCGAGTCTTTGGGCCGCCAGGGTTTCTATTTCTTTTGCTAAGAATAGATTCTGAGACAGAA
CTTGATAGAAGTTGTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MLLGVFVSLLLVSCSTSFLKYEKADQLKKNEEFEGAVTIVKPQSESPPETAPAEPAQAGKDTKAASQPATKSTAKTTAKS
STQTTDKTAAKAPVKASEKTAVAPAVKAPSKASKSAAKTEAATAQAPVRQPDIEDSEGFNGRRPVNDPFRVGEEVVHDVH
YFKVSAGELRMKVEPFAMVNNRKSYTFAVEIRTSPLFSSFYSVEDRVETFVDYEDLVPRVFQLHVKESGQLREAKMLFDV
EKNTATFWEKKVTKDHGEEEKKQNWEILPYTQNVYSAIYYMRNFKWETGKEYSFRVGNDNENLVFSGKALRREVLNTKLG
PIKAIVVQPKITLKGKLNPIGDNFIWLSDDDRKYILRIESKIKIGTLVSEVVEIKPGK

Sequences:

>Translated_378_residues
MLLGVFVSLLLVSCSTSFLKYEKADQLKKNEEFEGAVTIVKPQSESPPETAPAEPAQAGKDTKAASQPATKSTAKTTAKS
STQTTDKTAAKAPVKASEKTAVAPAVKAPSKASKSAAKTEAATAQAPVRQPDIEDSEGFNGRRPVNDPFRVGEEVVHDVH
YFKVSAGELRMKVEPFAMVNNRKSYTFAVEIRTSPLFSSFYSVEDRVETFVDYEDLVPRVFQLHVKESGQLREAKMLFDV
EKNTATFWEKKVTKDHGEEEKKQNWEILPYTQNVYSAIYYMRNFKWETGKEYSFRVGNDNENLVFSGKALRREVLNTKLG
PIKAIVVQPKITLKGKLNPIGDNFIWLSDDDRKYILRIESKIKIGTLVSEVVEIKPGK
>Mature_378_residues
MLLGVFVSLLLVSCSTSFLKYEKADQLKKNEEFEGAVTIVKPQSESPPETAPAEPAQAGKDTKAASQPATKSTAKTTAKS
STQTTDKTAAKAPVKASEKTAVAPAVKAPSKASKSAAKTEAATAQAPVRQPDIEDSEGFNGRRPVNDPFRVGEEVVHDVH
YFKVSAGELRMKVEPFAMVNNRKSYTFAVEIRTSPLFSSFYSVEDRVETFVDYEDLVPRVFQLHVKESGQLREAKMLFDV
EKNTATFWEKKVTKDHGEEEKKQNWEILPYTQNVYSAIYYMRNFKWETGKEYSFRVGNDNENLVFSGKALRREVLNTKLG
PIKAIVVQPKITLKGKLNPIGDNFIWLSDDDRKYILRIESKIKIGTLVSEVVEIKPGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42255; Mature: 42255

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGVFVSLLLVSCSTSFLKYEKADQLKKNEEFEGAVTIVKPQSESPPETAPAEPAQAGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCC
DTKAASQPATKSTAKTTAKSSTQTTDKTAAKAPVKASEKTAVAPAVKAPSKASKSAAKTE
CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AATAQAPVRQPDIEDSEGFNGRRPVNDPFRVGEEVVHDVHYFKVSAGELRMKVEPFAMVN
HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCEEEEECCEEEEC
NRKSYTFAVEIRTSPLFSSFYSVEDRVETFVDYEDLVPRVFQLHVKESGQLREAKMLFDV
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHEEEEE
EKNTATFWEKKVTKDHGEEEKKQNWEILPYTQNVYSAIYYMRNFKWETGKEYSFRVGNDN
CCCHHHHHHHHHHHHCCCHHHHCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
ENLVFSGKALRREVLNTKLGPIKAIVVQPKITLKGKLNPIGDNFIWLSDDDRKYILRIES
CCEEEECHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCEEEECCCCCEEEEEEEC
KIKIGTLVSEVVEIKPGK
CCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLGVFVSLLLVSCSTSFLKYEKADQLKKNEEFEGAVTIVKPQSESPPETAPAEPAQAGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCC
DTKAASQPATKSTAKTTAKSSTQTTDKTAAKAPVKASEKTAVAPAVKAPSKASKSAAKTE
CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AATAQAPVRQPDIEDSEGFNGRRPVNDPFRVGEEVVHDVHYFKVSAGELRMKVEPFAMVN
HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCEEEEECCEEEEC
NRKSYTFAVEIRTSPLFSSFYSVEDRVETFVDYEDLVPRVFQLHVKESGQLREAKMLFDV
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHEEEEE
EKNTATFWEKKVTKDHGEEEKKQNWEILPYTQNVYSAIYYMRNFKWETGKEYSFRVGNDN
CCCHHHHHHHHHHHHCCCHHHHCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
ENLVFSGKALRREVLNTKLGPIKAIVVQPKITLKGKLNPIGDNFIWLSDDDRKYILRIES
CCEEEECHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCEEEECCCCCEEEEEEEC
KIKIGTLVSEVVEIKPGK
CCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA