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The map label for this gene is ompH

Identifier: 42523002

GI number: 42523002

Start: 1414952

End: 1415452

Strand: Direct

Name: ompH

Synonym: Bd1494

Alternate gene names: NA

Gene position: 1414952-1415452 (Clockwise)

Preceding gene: 42523001

Following gene: 42523003

Centisome position: 37.4

GC content: 41.52

Gene sequence:

>501_bases
ATGAAGAGAATGTTGATCGTGTTGAGCATGCTACTGACGGCATCTTTCGCACAAGCGCAGGCAAAAGTTGGATTTGTAGA
TATGCAAAAAGCTATTCAATCCACTTCTGCGGGTAAGAAAGCAAAAACTGAACTTGAAACAGAGTTCAACAAAAAGAAAA
AAGAACTAGAGAAAAAAGAAGCAGACTTGAAAAAGATGGGTGAAGACCTGGAAAAGAAAAAGTCTGTGCTTTCTGAAGAA
GCGCTTGGTAAAAAACAAGCTGAATTCCAGGAAGAAATGCTGAAGTATCGTGATGTGGTAGGCAAAAGCCAGATCGAGAT
TCAGAAAAAAGAGCGTGAGCTGACGGCTCCGATTCTTGATAAAATGAAAAAAGTGATCGCGAAACTTGCGAAAGATAAAG
GTTACACTCTGGTGCTGGAGAACTCTCAAATGGTTCTTTACGCAACGGCGGATGCGGACCTGACAACTGAAGTAATCGCG
GCCTTCGAAAAAGAAAAGTAG

Upstream 100 bases:

>100_bases
CTAGTTTCTAAGTCGGCCGTGCCGAGGAGGCTGGAGCGCCGGCAGGCGCGAAAGCTGGACTGACTAAATTATTTTTAAAA
CCTTTTAAGGAGGATTTGGA

Downstream 100 bases:

>100_bases
TTGATAAGAAAACGAAAGGGCCTGCAAAGGCCCTTTTCTATTTTAGGAATAGAAGTTCATGGCAAATTATAAAATTCATC
CAAGCAGTGTTATTTCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; OmpH-Like Outer Membrane Protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKRMLIVLSMLLTASFAQAQAKVGFVDMQKAIQSTSAGKKAKTELETEFNKKKKELEKKEADLKKMGEDLEKKKSVLSEE
ALGKKQAEFQEEMLKYRDVVGKSQIEIQKKERELTAPILDKMKKVIAKLAKDKGYTLVLENSQMVLYATADADLTTEVIA
AFEKEK

Sequences:

>Translated_166_residues
MKRMLIVLSMLLTASFAQAQAKVGFVDMQKAIQSTSAGKKAKTELETEFNKKKKELEKKEADLKKMGEDLEKKKSVLSEE
ALGKKQAEFQEEMLKYRDVVGKSQIEIQKKERELTAPILDKMKKVIAKLAKDKGYTLVLENSQMVLYATADADLTTEVIA
AFEKEK
>Mature_166_residues
MKRMLIVLSMLLTASFAQAQAKVGFVDMQKAIQSTSAGKKAKTELETEFNKKKKELEKKEADLKKMGEDLEKKKSVLSEE
ALGKKQAEFQEEMLKYRDVVGKSQIEIQKKERELTAPILDKMKKVIAKLAKDKGYTLVLENSQMVLYATADADLTTEVIA
AFEKEK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18765; Mature: 18765

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMLIVLSMLLTASFAQAQAKVGFVDMQKAIQSTSAGKKAKTELETEFNKKKKELEKKE
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ADLKKMGEDLEKKKSVLSEEALGKKQAEFQEEMLKYRDVVGKSQIEIQKKERELTAPILD
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KMKKVIAKLAKDKGYTLVLENSQMVLYATADADLTTEVIAAFEKEK
HHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKRMLIVLSMLLTASFAQAQAKVGFVDMQKAIQSTSAGKKAKTELETEFNKKKKELEKKE
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ADLKKMGEDLEKKKSVLSEEALGKKQAEFQEEMLKYRDVVGKSQIEIQKKERELTAPILD
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KMKKVIAKLAKDKGYTLVLENSQMVLYATADADLTTEVIAAFEKEK
HHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA