Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522932

Identifier: 42522932

GI number: 42522932

Start: 1337900

End: 1338700

Strand: Direct

Name: 42522932

Synonym: Bd1415

Alternate gene names: NA

Gene position: 1337900-1338700 (Clockwise)

Preceding gene: 42522931

Following gene: 42522935

Centisome position: 35.37

GC content: 55.81

Gene sequence:

>801_bases
ATGCCTGGACAAACCCTGGATCTGAAAAGTTTCAAAATCCCGCTGGGAAAACTTTCCCCGCTTGAAACTTTTCGCACGCG
CCAGGGGGATGTCCTGTCTTATCGCCTGTACCCCGCATGGTCAGACAACCTGATTGTCCTGTATCACGGGGTGGGCAGTG
ACAGCCGGTACATGTGTGTGCTGGCCACCGCCATGGCCCAGGCCGGACTGGGCACCGTGGTGACCCCGGATCTGCGCGGT
CACGGTGCCAGCCTGAATGCGGCCGATCCGCAGTCACAGCATCAATTCGAAATCGATCTTGAAGAGCTTATCATCCACAT
CAAAATGACCCGCGCGGTTTCCCGCGTGATGCTGGCCGGGCACTCGTTGGGTGGCGGTTTTGTGTTGCGTGTGGCAGTGT
CTGATATTCGCAGGCAATTTGCCAGATTCCTGGCGATCTCGCCGTACCTGCCTCCCAGCCTGAATGTTTTCCGTGAGGAC
TTTGGCGGGTGGATTTCACCTGATGGCAACGGTGGTTTTAAAGTTAACATGCCTGTTGAATTTGTCTCTGGCCAGGAAAA
GCTGACTTACAGTGCGGCTTATCTGGCCGCCGTGACTCCGTCGAAAAACATCCTGGCGGACCTTCAGAAGTTGCAGCCGC
CGGTGCAGGTTGTGGTGGCCGAGCTGGATGAACTTATTATTCCGCAGCGCCAGGTGCAGCTGTTCACTGACGCTGGAGCG
AACATCCGCGTGGTGAAGGACTTGAATCACCTCACGATTGTCTCGAAACCGGATGTCTGGCTGCCAGAAATTTCACTTTG
A

Upstream 100 bases:

>100_bases
TGACCACAAGAGTATTTGAAGTCGATAAGAACCAGATTCGCATCTACGACGGCGACTACGAATACTATCAGCTTAAAAAA
CAACAAGAGCAGATGGCTTA

Downstream 100 bases:

>100_bases
GTCGTGAAAATTACGATTGATCCCCCAGGTGGGGAATTTACTCTAAACCGCTTTAGCTCTATCAATGTCCTGCCGAAAAG
TTATACGAAATAACCAAAAT

Product: putative lysophospholipase

Products: NA

Alternate protein names: Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Fold Protein; Lysophospholipase; Alpha/Beta Fold Family Hydrolase

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MPGQTLDLKSFKIPLGKLSPLETFRTRQGDVLSYRLYPAWSDNLIVLYHGVGSDSRYMCVLATAMAQAGLGTVVTPDLRG
HGASLNAADPQSQHQFEIDLEELIIHIKMTRAVSRVMLAGHSLGGGFVLRVAVSDIRRQFARFLAISPYLPPSLNVFRED
FGGWISPDGNGGFKVNMPVEFVSGQEKLTYSAAYLAAVTPSKNILADLQKLQPPVQVVVAELDELIIPQRQVQLFTDAGA
NIRVVKDLNHLTIVSKPDVWLPEISL

Sequences:

>Translated_266_residues
MPGQTLDLKSFKIPLGKLSPLETFRTRQGDVLSYRLYPAWSDNLIVLYHGVGSDSRYMCVLATAMAQAGLGTVVTPDLRG
HGASLNAADPQSQHQFEIDLEELIIHIKMTRAVSRVMLAGHSLGGGFVLRVAVSDIRRQFARFLAISPYLPPSLNVFRED
FGGWISPDGNGGFKVNMPVEFVSGQEKLTYSAAYLAAVTPSKNILADLQKLQPPVQVVVAELDELIIPQRQVQLFTDAGA
NIRVVKDLNHLTIVSKPDVWLPEISL
>Mature_265_residues
PGQTLDLKSFKIPLGKLSPLETFRTRQGDVLSYRLYPAWSDNLIVLYHGVGSDSRYMCVLATAMAQAGLGTVVTPDLRGH
GASLNAADPQSQHQFEIDLEELIIHIKMTRAVSRVMLAGHSLGGGFVLRVAVSDIRRQFARFLAISPYLPPSLNVFREDF
GGWISPDGNGGFKVNMPVEFVSGQEKLTYSAAYLAAVTPSKNILADLQKLQPPVQVVVAELDELIIPQRQVQLFTDAGAN
IRVVKDLNHLTIVSKPDVWLPEISL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29205; Mature: 29074

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGQTLDLKSFKIPLGKLSPLETFRTRQGDVLSYRLYPAWSDNLIVLYHGVGSDSRYMCV
CCCCCCCCCEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHH
LATAMAQAGLGTVVTPDLRGHGASLNAADPQSQHQFEIDLEELIIHIKMTRAVSRVMLAG
HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHC
HSLGGGFVLRVAVSDIRRQFARFLAISPYLPPSLNVFREDFGGWISPDGNGGFKVNMPVE
CCCCCCEEEEHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCEECCCCCCCEEEECCHH
FVSGQEKLTYSAAYLAAVTPSKNILADLQKLQPPVQVVVAELDELIIPQRQVQLFTDAGA
EECCCCCEEEEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEECCCC
NIRVVKDLNHLTIVSKPDVWLPEISL
CEEEEEECCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PGQTLDLKSFKIPLGKLSPLETFRTRQGDVLSYRLYPAWSDNLIVLYHGVGSDSRYMCV
CCCCCCCCEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHH
LATAMAQAGLGTVVTPDLRGHGASLNAADPQSQHQFEIDLEELIIHIKMTRAVSRVMLAG
HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHC
HSLGGGFVLRVAVSDIRRQFARFLAISPYLPPSLNVFREDFGGWISPDGNGGFKVNMPVE
CCCCCCEEEEHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCEECCCCCCCEEEECCHH
FVSGQEKLTYSAAYLAAVTPSKNILADLQKLQPPVQVVVAELDELIIPQRQVQLFTDAGA
EECCCCCEEEEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEECCCC
NIRVVKDLNHLTIVSKPDVWLPEISL
CEEEEEECCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA