Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522886

Identifier: 42522886

GI number: 42522886

Start: 1291277

End: 1291819

Strand: Direct

Name: 42522886

Synonym: Bd1367

Alternate gene names: NA

Gene position: 1291277-1291819 (Clockwise)

Preceding gene: 42522884

Following gene: 42522887

Centisome position: 34.13

GC content: 52.49

Gene sequence:

>543_bases
ATGGAAATCTCACCAAGTGGAAGAAAGCAAGATGCCAAACACAAAGGCTCAACCCCGCATTCGAAGCTGCTGGTGATTGA
TCGCCAGTTTGATGTGCCACTGGAGAAGCTGTTTGCCGCCTTTAGCAGCGCGGAGGCCCTTAAAAGATGGTGGTGGCCGG
AGGGCATTTACGCAGATCACATTGATTGGGAGCTGCGGGACGGCGGCAAGTACTTCATCAATATGAAGGGCTACGATCAG
AGTGCCAGCGGCATGGCCGGTTGGATTGAAGAGGTGGTAAAAAACGAACGCATCGTTATGACCGACCAATTCGCCAATGA
AAAAGGCGAGCCGATCTCGGCCAAAGAAGCCAACATGCCAGGGGAATGGCCCGCCAAAGGCTATATCACCTTCGAGTTTG
AATCCCGCGGGAAGGATCGCAGTGCTTTTAGGCTGTCGCAAGAAGGTATCCCCAATGAATTGCAAGCGGAGTGTATTCAA
GGCTGGGCAGAGTCTTTTGAAAAACTGAAGAAATACTTGGCGGGGCCGGCGCAAGGCCACTAA

Upstream 100 bases:

>100_bases
TGATTTGAGGCCACTTTTAACACAATATGCGTAAAACTCTTAATTCCTGAACCCACTTCTATAAACTTGTCCGGGAAGCG
ATGAGAGCAAAGGAGTTCAA

Downstream 100 bases:

>100_bases
GGTGGCATACATCAAAAGTACGATGATCTTTGCCGTTTGTATTTCGTTGTCGTAATCCCACGAGAAGAATGATTAAGAGA
CTGAAAAGGTCTTGGGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MEISPSGRKQDAKHKGSTPHSKLLVIDRQFDVPLEKLFAAFSSAEALKRWWWPEGIYADHIDWELRDGGKYFINMKGYDQ
SASGMAGWIEEVVKNERIVMTDQFANEKGEPISAKEANMPGEWPAKGYITFEFESRGKDRSAFRLSQEGIPNELQAECIQ
GWAESFEKLKKYLAGPAQGH

Sequences:

>Translated_180_residues
MEISPSGRKQDAKHKGSTPHSKLLVIDRQFDVPLEKLFAAFSSAEALKRWWWPEGIYADHIDWELRDGGKYFINMKGYDQ
SASGMAGWIEEVVKNERIVMTDQFANEKGEPISAKEANMPGEWPAKGYITFEFESRGKDRSAFRLSQEGIPNELQAECIQ
GWAESFEKLKKYLAGPAQGH
>Mature_180_residues
MEISPSGRKQDAKHKGSTPHSKLLVIDRQFDVPLEKLFAAFSSAEALKRWWWPEGIYADHIDWELRDGGKYFINMKGYDQ
SASGMAGWIEEVVKNERIVMTDQFANEKGEPISAKEANMPGEWPAKGYITFEFESRGKDRSAFRLSQEGIPNELQAECIQ
GWAESFEKLKKYLAGPAQGH

Specific function: Unknown

COG id: COG3832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20457; Mature: 20457

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISPSGRKQDAKHKGSTPHSKLLVIDRQFDVPLEKLFAAFSSAEALKRWWWPEGIYADH
CCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECC
IDWELRDGGKYFINMKGYDQSASGMAGWIEEVVKNERIVMTDQFANEKGEPISAKEANMP
CCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC
GEWPAKGYITFEFESRGKDRSAFRLSQEGIPNELQAECIQGWAESFEKLKKYLAGPAQGH
CCCCCCCEEEEEECCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEISPSGRKQDAKHKGSTPHSKLLVIDRQFDVPLEKLFAAFSSAEALKRWWWPEGIYADH
CCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECC
IDWELRDGGKYFINMKGYDQSASGMAGWIEEVVKNERIVMTDQFANEKGEPISAKEANMP
CCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC
GEWPAKGYITFEFESRGKDRSAFRLSQEGIPNELQAECIQGWAESFEKLKKYLAGPAQGH
CCCCCCCEEEEEECCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA