Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522878

Identifier: 42522878

GI number: 42522878

Start: 1284165

End: 1285019

Strand: Direct

Name: 42522878

Synonym: Bd1359

Alternate gene names: NA

Gene position: 1284165-1285019 (Clockwise)

Preceding gene: 42522874

Following gene: 42522882

Centisome position: 33.95

GC content: 49.82

Gene sequence:

>855_bases
ATGAAAAAACTGTTAATGCTTCTTTCACTTCTTTTGATCAATTGCCAGGAAAGTCCCGAAAGCTTTCAGGGAACAGGCAT
GGACATGGGGCAGGGACAGGGGATTATCGGTGGGACCACGGCTTCTTTTCAAAGTGATCTGTCCCAGATGGTTGTCAGTG
TGCGCACTTATTATAACACCCGCATTGAGGTTATAAACGGGCAGAAGGTGGAAATGAACGACGTGTTTCAGTGCACGGGG
ATTCCACTGAGCAGGCAGTTGATTTTGACGGCCGCCCATTGTTTGAAGACTCCGGATGGGTATTTACGCACGGTCGAATT
TAAAACCAAAGCCGGAGAGCATCTGGCTTATGCAGAAGACACGTTCGTGGTGCCAGAACAGTACAAAGCCGGAAATCAGG
ATTATGATTTTGGGATTTTGAAGTTAAAAAAGCAGTTATCTGAGGACATAATTATCACGCCCTTGATGGATCATTCTATC
GGGGATCTGCGCTCTGTTCTGGCGGCAGGGTATGGGCGCACCAATGGTGTTTGGTCTGACATTAAAGGTGATGGCGGCAA
CACCCTGCGTTCGGTTCAATTGACGGTGTCCGCTTTCGCAAAGAACGAAAACCGTTTCCGTGTGCAACAGTCTCAAGGCA
AAGGTTTTTGTCAGGGGGACTCCGGTGGCCCCGCCTTTGCCCGAATTCAAGGACGAACCTATGTGGTGGGGATCGCCTCA
AAAACAACACGATCGTCAGAGTCCGCCACGGTCGACACTGAACGCTGCACCGATGAGGGTATTTATATCAGCGTTCAGAA
GCAATTTGGCATGATCGTGGAGCTGGCCAAGTCCTTGGCCACTGACGTCCCTTAG

Upstream 100 bases:

>100_bases
GACAGCCCGGGGCAGCCACAAGCGGCTTATAGTTCTTCCAAGATCCCGGGGGGCGGGCACGAGACTCGCAAGGGTGCTTT
AAGCCCAGCAAAGGCGCTTT

Downstream 100 bases:

>100_bases
TTAGGGGAATGTCGGTTTTTTGCTGGCGTCCCAGGCAGGATTGGATTGGTGATCGAAGAGGGTGTTGTTCACGCCCGCAG
GCAGGACCCACCCACTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: Serine Protease; Phosphotrypsin; Secreted Trypsin-Like Serine Protease

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKKLLMLLSLLLINCQESPESFQGTGMDMGQGQGIIGGTTASFQSDLSQMVVSVRTYYNTRIEVINGQKVEMNDVFQCTG
IPLSRQLILTAAHCLKTPDGYLRTVEFKTKAGEHLAYAEDTFVVPEQYKAGNQDYDFGILKLKKQLSEDIIITPLMDHSI
GDLRSVLAAGYGRTNGVWSDIKGDGGNTLRSVQLTVSAFAKNENRFRVQQSQGKGFCQGDSGGPAFARIQGRTYVVGIAS
KTTRSSESATVDTERCTDEGIYISVQKQFGMIVELAKSLATDVP

Sequences:

>Translated_284_residues
MKKLLMLLSLLLINCQESPESFQGTGMDMGQGQGIIGGTTASFQSDLSQMVVSVRTYYNTRIEVINGQKVEMNDVFQCTG
IPLSRQLILTAAHCLKTPDGYLRTVEFKTKAGEHLAYAEDTFVVPEQYKAGNQDYDFGILKLKKQLSEDIIITPLMDHSI
GDLRSVLAAGYGRTNGVWSDIKGDGGNTLRSVQLTVSAFAKNENRFRVQQSQGKGFCQGDSGGPAFARIQGRTYVVGIAS
KTTRSSESATVDTERCTDEGIYISVQKQFGMIVELAKSLATDVP
>Mature_284_residues
MKKLLMLLSLLLINCQESPESFQGTGMDMGQGQGIIGGTTASFQSDLSQMVVSVRTYYNTRIEVINGQKVEMNDVFQCTG
IPLSRQLILTAAHCLKTPDGYLRTVEFKTKAGEHLAYAEDTFVVPEQYKAGNQDYDFGILKLKKQLSEDIIITPLMDHSI
GDLRSVLAAGYGRTNGVWSDIKGDGGNTLRSVQLTVSAFAKNENRFRVQQSQGKGFCQGDSGGPAFARIQGRTYVVGIAS
KTTRSSESATVDTERCTDEGIYISVQKQFGMIVELAKSLATDVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31007; Mature: 31007

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLMLLSLLLINCQESPESFQGTGMDMGQGQGIIGGTTASFQSDLSQMVVSVRTYYNT
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCC
RIEVINGQKVEMNDVFQCTGIPLSRQLILTAAHCLKTPDGYLRTVEFKTKAGEHLAYAED
EEEEECCCEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCC
TFVVPEQYKAGNQDYDFGILKLKKQLSEDIIITPLMDHSIGDLRSVLAAGYGRTNGVWSD
EEECCHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
IKGDGGNTLRSVQLTVSAFAKNENRFRVQQSQGKGFCQGDSGGPAFARIQGRTYVVGIAS
CCCCCCCEEEEEEEEEEEHHCCCCEEEEECCCCCEEEECCCCCCEEEEECCCEEEEEECC
KTTRSSESATVDTERCTDEGIYISVQKQFGMIVELAKSLATDVP
CCCCCCCCCEECHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLLMLLSLLLINCQESPESFQGTGMDMGQGQGIIGGTTASFQSDLSQMVVSVRTYYNT
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCC
RIEVINGQKVEMNDVFQCTGIPLSRQLILTAAHCLKTPDGYLRTVEFKTKAGEHLAYAED
EEEEECCCEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCC
TFVVPEQYKAGNQDYDFGILKLKKQLSEDIIITPLMDHSIGDLRSVLAAGYGRTNGVWSD
EEECCHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
IKGDGGNTLRSVQLTVSAFAKNENRFRVQQSQGKGFCQGDSGGPAFARIQGRTYVVGIAS
CCCCCCCEEEEEEEEEEEHHCCCCEEEEECCCCCEEEECCCCCCEEEEECCCEEEEEECC
KTTRSSESATVDTERCTDEGIYISVQKQFGMIVELAKSLATDVP
CCCCCCCCCEECHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA