| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is parA [C]
Identifier: 42522847
GI number: 42522847
Start: 1252996
End: 1253925
Strand: Direct
Name: parA [C]
Synonym: Bd1326
Alternate gene names: 42522847
Gene position: 1252996-1253925 (Clockwise)
Preceding gene: 42522846
Following gene: 42522848
Centisome position: 33.12
GC content: 49.68
Gene sequence:
>930_bases ATGTCCACTTTGGCGCAACAGGAGTTTTGCATTACTCTCAGCGATTTGGCCTCGTTCATGGAGATTCCTCCAAATCAAAT CAAGGCCAAGGCTGAAAAAACTTTGCAGCGAAAGATCAAATCCCCGTGGCTGCTTCCCGAAGAAGCCCGTCAATTGTTGC TGGCTGAAGGTTACAAGTATCCCCACAAGGTGATTTCTATCCAAATGCTTAAAGGTGGGGTGGCCAAGACCACGTCCGTC CTGAACATGGGGCTGCGAGCCGCCATGTACGGCGCACGCGTGCTATTTGTGGACTTGGATCAGCAGGCTAATTTGAGTTT CGCTTTGGGTGTCGAGGACGAGTCCCTTCCAGTCTGGGTGGACATCGTCGAAAAAAAGAAAAGCATCGATGAATGTGTGC GTTTTATCGAACCGCACGTGGATTTGATTCCGTCCAGTCTGAACAATTCGGTTTTGGACCGGGTGTTGCTGAACTCCAAC CGCAACTGGTCTTTGGCGGTGAAAACCCCGCTGGAAAAAATCAAACACCGTTATGACCTGATTCTGATCGACACAGCTCC AGCCCTGAGCGCCACGAACACCGCTGTGACCGTGGCTTCCGACGAGGTGATTTTGCCAGTGAACCCGGACAAGTTCGCCT TTATGGGCCTGCAAAAGAACCTGAGCGAACTGGAAGACATCCGCAGCGACTTCAGTCTGGAGTTCTCGCGTAAAGTTCTC TTTACCAAATTCGATGGACGTGAGAAGTTCAGTCATGAGCTTTTACAAAAGTGCATAGAGTCTTTTGAGGACTCGCTGAT GAAGGGCTATATTCGAACTTCAGCAGAGGTGAAAAACACCGTGCGCTCCGGCAAGAGTCTTTATGCCGGAAAGTCTCCGA TCAAAGCCGACTATGATTTTGTAACCCGTGAAATGTTGGGATTTGTTTAA
Upstream 100 bases:
>100_bases TCAGCCACCTTGAAGAGTTTGGCCCCCGATAAGTTGGTGCGCTGCGTGTTTCCAAGCTTAAAACCCCCTTGTAGGCTTGA AGGACTGACGGAGGTCCTTC
Downstream 100 bases:
>100_bases AAGGAAGTAAACATGCCAGAGATCAAGCATTACGACGCAAAGAAAAAGCATCATCATCCAAAAAAACGCCGTCCTCATCA CGAGGCGCAGGCGGAAATCG
Product: chromosome partitioning protein parA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSTLAQQEFCITLSDLASFMEIPPNQIKAKAEKTLQRKIKSPWLLPEEARQLLLAEGYKYPHKVISIQMLKGGVAKTTSV LNMGLRAAMYGARVLFVDLDQQANLSFALGVEDESLPVWVDIVEKKKSIDECVRFIEPHVDLIPSSLNNSVLDRVLLNSN RNWSLAVKTPLEKIKHRYDLILIDTAPALSATNTAVTVASDEVILPVNPDKFAFMGLQKNLSELEDIRSDFSLEFSRKVL FTKFDGREKFSHELLQKCIESFEDSLMKGYIRTSAEVKNTVRSGKSLYAGKSPIKADYDFVTREMLGFV
Sequences:
>Translated_309_residues MSTLAQQEFCITLSDLASFMEIPPNQIKAKAEKTLQRKIKSPWLLPEEARQLLLAEGYKYPHKVISIQMLKGGVAKTTSV LNMGLRAAMYGARVLFVDLDQQANLSFALGVEDESLPVWVDIVEKKKSIDECVRFIEPHVDLIPSSLNNSVLDRVLLNSN RNWSLAVKTPLEKIKHRYDLILIDTAPALSATNTAVTVASDEVILPVNPDKFAFMGLQKNLSELEDIRSDFSLEFSRKVL FTKFDGREKFSHELLQKCIESFEDSLMKGYIRTSAEVKNTVRSGKSLYAGKSPIKADYDFVTREMLGFV >Mature_308_residues STLAQQEFCITLSDLASFMEIPPNQIKAKAEKTLQRKIKSPWLLPEEARQLLLAEGYKYPHKVISIQMLKGGVAKTTSVL NMGLRAAMYGARVLFVDLDQQANLSFALGVEDESLPVWVDIVEKKKSIDECVRFIEPHVDLIPSSLNNSVLDRVLLNSNR NWSLAVKTPLEKIKHRYDLILIDTAPALSATNTAVTVASDEVILPVNPDKFAFMGLQKNLSELEDIRSDFSLEFSRKVLF TKFDGREKFSHELLQKCIESFEDSLMKGYIRTSAEVKNTVRSGKSLYAGKSPIKADYDFVTREMLGFV
Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 34811; Mature: 34679
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLAQQEFCITLSDLASFMEIPPNQIKAKAEKTLQRKIKSPWLLPEEARQLLLAEGYKY CCCCHHHHHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC PHKVISIQMLKGGVAKTTSVLNMGLRAAMYGARVLFVDLDQQANLSFALGVEDESLPVWV CHHHEEEHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCCHH DIVEKKKSIDECVRFIEPHVDLIPSSLNNSVLDRVLLNSNRNWSLAVKTPLEKIKHRYDL HHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCE ILIDTAPALSATNTAVTVASDEVILPVNPDKFAFMGLQKNLSELEDIRSDFSLEFSRKVL EEEECCCCCCCCCCEEEEECCCEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCEECCEEE FTKFDGREKFSHELLQKCIESFEDSLMKGYIRTSAEVKNTVRSGKSLYAGKSPIKADYDF EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH VTREMLGFV HHHHHHCCC >Mature Secondary Structure STLAQQEFCITLSDLASFMEIPPNQIKAKAEKTLQRKIKSPWLLPEEARQLLLAEGYKY CCCHHHHHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC PHKVISIQMLKGGVAKTTSVLNMGLRAAMYGARVLFVDLDQQANLSFALGVEDESLPVWV CHHHEEEHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCCHH DIVEKKKSIDECVRFIEPHVDLIPSSLNNSVLDRVLLNSNRNWSLAVKTPLEKIKHRYDL HHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCE ILIDTAPALSATNTAVTVASDEVILPVNPDKFAFMGLQKNLSELEDIRSDFSLEFSRKVL EEEECCCCCCCCCCEEEEECCCEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCEECCEEE FTKFDGREKFSHELLQKCIESFEDSLMKGYIRTSAEVKNTVRSGKSLYAGKSPIKADYDF EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH VTREMLGFV HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]