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The map label for this gene is pilA [H]

Identifier: 42522813

GI number: 42522813

Start: 1223248

End: 1223820

Strand: Direct

Name: pilA [H]

Synonym: Bd1290

Alternate gene names: 42522813

Gene position: 1223248-1223820 (Clockwise)

Preceding gene: 42522808

Following gene: 42522814

Centisome position: 32.34

GC content: 48.34

Gene sequence:

>573_bases
ATGTTTTCAGTTAGCAGAAAATCTCAAAGCGGTTTCTCGCTTGTAGAGTTGATGGTCGTTGTTGCGATCATCGGTGTTTT
GGCGTCTATCGCCGTTCCAGCAATCAACAAATACTTGGCGAAAGCTCGTCAGTCCGAAGCTAAGACAAACTTGTCTTCTT
TGTACACGTCAGAGAAAGCTTTCTATGCAGAGTACACTGCATACCATACAATGTTTGGTGCTATCGGTTACTCTCCAGAA
GGTAAATTGAGATACAACGTTGGATTCAATGCGCCGGGTGCTCCAGAGGCGGGTGCTACCAACGGTTATAACAATCCACC
GACAGCGGCTCCGGGGAATACGCGCAATACGGCTGCATATTGCGGTACTACTGGTGTTATTGGTGCTGCGGGTTGTACTG
TGCTAGCGGGTGCAACTAATGCCGTGGTGCCAGGTTTGCCTGCAACATTGCTGAATGGTACCCAATTCCGTGCGGCAGCA
ATTGCTGTTATTCATACTGCTATGCCTGCAGGTGACGTTTGGACGATTGATCAGAATAAAGATCTTCGTAATCCGACGCC
AGGTATCCCATAG

Upstream 100 bases:

>100_bases
ATTACTCAGTCTTATTCGAGACAGGACCTTGATTTCACCATTCGAATTTGACACACTTATGTGGGTAAACAGTTAGTAAA
AGAACCATGGAGGTCTTTAA

Downstream 100 bases:

>100_bases
GTTTTTCATGGATAGTGTGTTAACTAATCTAACACATCTGCAAAAAACAAAAATCCCAAGCGTTTTGCTTGGGATTTTTG
CGTTGTTGATGGTGTGTTCT

Product: fimbrial protein pilA

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MFSVSRKSQSGFSLVELMVVVAIIGVLASIAVPAINKYLAKARQSEAKTNLSSLYTSEKAFYAEYTAYHTMFGAIGYSPE
GKLRYNVGFNAPGAPEAGATNGYNNPPTAAPGNTRNTAAYCGTTGVIGAAGCTVLAGATNAVVPGLPATLLNGTQFRAAA
IAVIHTAMPAGDVWTIDQNKDLRNPTPGIP

Sequences:

>Translated_190_residues
MFSVSRKSQSGFSLVELMVVVAIIGVLASIAVPAINKYLAKARQSEAKTNLSSLYTSEKAFYAEYTAYHTMFGAIGYSPE
GKLRYNVGFNAPGAPEAGATNGYNNPPTAAPGNTRNTAAYCGTTGVIGAAGCTVLAGATNAVVPGLPATLLNGTQFRAAA
IAVIHTAMPAGDVWTIDQNKDLRNPTPGIP
>Mature_190_residues
MFSVSRKSQSGFSLVELMVVVAIIGVLASIAVPAINKYLAKARQSEAKTNLSSLYTSEKAFYAEYTAYHTMFGAIGYSPE
GKLRYNVGFNAPGAPEAGATNGYNNPPTAAPGNTRNTAAYCGTTGVIGAAGCTVLAGATNAVVPGLPATLLNGTQFRAAA
IAVIHTAMPAGDVWTIDQNKDLRNPTPGIP

Specific function: Makes up the pili which are long filamentous (less than 10 nm thick and up to 10 um long) polarly located appendages. They are required for social (S) motility [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 19615; Mature: 19615

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVSRKSQSGFSLVELMVVVAIIGVLASIAVPAINKYLAKARQSEAKTNLSSLYTSEKA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FYAEYTAYHTMFGAIGYSPEGKLRYNVGFNAPGAPEAGATNGYNNPPTAAPGNTRNTAAY
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
CGTTGVIGAAGCTVLAGATNAVVPGLPATLLNGTQFRAAAIAVIHTAMPAGDVWTIDQNK
CCCCCCHHHCCCEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCC
DLRNPTPGIP
CCCCCCCCCC
>Mature Secondary Structure
MFSVSRKSQSGFSLVELMVVVAIIGVLASIAVPAINKYLAKARQSEAKTNLSSLYTSEKA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FYAEYTAYHTMFGAIGYSPEGKLRYNVGFNAPGAPEAGATNGYNNPPTAAPGNTRNTAAY
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
CGTTGVIGAAGCTVLAGATNAVVPGLPATLLNGTQFRAAAIAVIHTAMPAGDVWTIDQNK
CCCCCCHHHCCCEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCC
DLRNPTPGIP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8748037 [H]