| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is kinC [H]
Identifier: 42522783
GI number: 42522783
Start: 1194687
End: 1195883
Strand: Direct
Name: kinC [H]
Synonym: Bd1258
Alternate gene names: 42522783
Gene position: 1194687-1195883 (Clockwise)
Preceding gene: 42522780
Following gene: 42522784
Centisome position: 31.58
GC content: 51.63
Gene sequence:
>1197_bases ATGGAAAACACAAGATCTTCGTCTCAAAATGAGATCCCCGTGAAATGGCTGTCGGTCTTTGCGATCGTAAGTCTGGTGGT CGCCGTACTTAGCTTCGGCTACGAAGTTCACCGCGCCCAGGATTCTGTTCGTCAGTACGTCGGGATTTGGGAAGACGATA TTGCCCGCGCCAAACTTTTCCAGGGCGACCCAACATTGCAAAATAAAATTCTGAAACAGCTTAAAGAAGTCCACACGGCC GTAGTAAAAAGCGAAGTTCAGAACCCTGAATCCCTGCAGTGCCTGATTTCCACGGAAGTGCCAATCACCCTGAACTCTTT GCCAGCCGGAAAAATGGCGGTGTGCTTCGGTCCGTCCGAGTTGGCGGTCAAAGCTCTGACTTCACCGGTGTTTATGTTGG GTGTGGTATTGGGTTTGATTTTGTTGGGGTTCGGCTATCGCCGTGAATTTTTGGCGCGTCTGCACGAACAAAAGCTGGAA TCTGAACTGGCCCGCAATAAAGAGATTTCGGAAATCTCGCGCCAGGTGGCGCATGATATCCGCGGACCGTTGATGGCCCT GACAACTTTAAGCCAGCTGTCCCATGATATGAGCACGGAAAAGAAAGAACTGTTTGATCACGCCGTGGCCCGCATCAAAG GTATCGCCGAAGATCTGCTGGCCAAGGGCCGCAAACAAAATGCGGAGTCCAGTGCGCCGGCAGTTAAAACATCACAGCAG GATCTGACGAACTTGATGGACTCCTTGTTGAAAGAATATCGTTTCTCTCATCCCGCAGTGAATTTCACCTGGCACAAACA CATTCATTCTGATGTGGTGAAGGTGAATCTGGAATCAGTAAAAATCCAGCGTGTGGTCAGTAATCTTTTGAACAACGCTC TGGAGGCTTTGCCGGAATCAGAGGCTGCTATTAATCTGACTTTGATGGAGCGCCAGGATCATTGGCTGCTGCAGATCATG GACAATGGCAGTGGCATCCCCGAGGACATTTTGCCAAAGCTGGCCCAAGAAGGCGTGAGCTACGGCAAAGACAATGGCAA TGGGCTGGGTCTGTACGATGCCAAGAAAACCCTGGAATCAGTAGGCGGCGACCTGCAGATTCGCTCCCGTGTCGGTGTCG GGACTCAGGTGATCCTGCGATTCCCCAAGTCTGCTGAGGCGGTGCTTGACCGCGCGGTGGCGACTCATCATCCTTAA
Upstream 100 bases:
>100_bases ATTAACATCACCCTGTTTCGTCGCCTGAACAATCTTTAGACACCTCTTTGGGGGTCTTGGTTGAGGGCAGGGCGGACCGG GCTTTGCTTGTGTTTAAGGT
Downstream 100 bases:
>100_bases TCCATGTACCGCACATGGAAGTATCTCGTAGTAAAAAATGAACAGGACCTGAAAAACCGGGATCGCTTGCAAAAGCTGGC AAGGCATCGCGGTCTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MENTRSSSQNEIPVKWLSVFAIVSLVVAVLSFGYEVHRAQDSVRQYVGIWEDDIARAKLFQGDPTLQNKILKQLKEVHTA VVKSEVQNPESLQCLISTEVPITLNSLPAGKMAVCFGPSELAVKALTSPVFMLGVVLGLILLGFGYRREFLARLHEQKLE SELARNKEISEISRQVAHDIRGPLMALTTLSQLSHDMSTEKKELFDHAVARIKGIAEDLLAKGRKQNAESSAPAVKTSQQ DLTNLMDSLLKEYRFSHPAVNFTWHKHIHSDVVKVNLESVKIQRVVSNLLNNALEALPESEAAINLTLMERQDHWLLQIM DNGSGIPEDILPKLAQEGVSYGKDNGNGLGLYDAKKTLESVGGDLQIRSRVGVGTQVILRFPKSAEAVLDRAVATHHP
Sequences:
>Translated_398_residues MENTRSSSQNEIPVKWLSVFAIVSLVVAVLSFGYEVHRAQDSVRQYVGIWEDDIARAKLFQGDPTLQNKILKQLKEVHTA VVKSEVQNPESLQCLISTEVPITLNSLPAGKMAVCFGPSELAVKALTSPVFMLGVVLGLILLGFGYRREFLARLHEQKLE SELARNKEISEISRQVAHDIRGPLMALTTLSQLSHDMSTEKKELFDHAVARIKGIAEDLLAKGRKQNAESSAPAVKTSQQ DLTNLMDSLLKEYRFSHPAVNFTWHKHIHSDVVKVNLESVKIQRVVSNLLNNALEALPESEAAINLTLMERQDHWLLQIM DNGSGIPEDILPKLAQEGVSYGKDNGNGLGLYDAKKTLESVGGDLQIRSRVGVGTQVILRFPKSAEAVLDRAVATHHP >Mature_398_residues MENTRSSSQNEIPVKWLSVFAIVSLVVAVLSFGYEVHRAQDSVRQYVGIWEDDIARAKLFQGDPTLQNKILKQLKEVHTA VVKSEVQNPESLQCLISTEVPITLNSLPAGKMAVCFGPSELAVKALTSPVFMLGVVLGLILLGFGYRREFLARLHEQKLE SELARNKEISEISRQVAHDIRGPLMALTTLSQLSHDMSTEKKELFDHAVARIKGIAEDLLAKGRKQNAESSAPAVKTSQQ DLTNLMDSLLKEYRFSHPAVNFTWHKHIHSDVVKVNLESVKIQRVVSNLLNNALEALPESEAAINLTLMERQDHWLLQIM DNGSGIPEDILPKLAQEGVSYGKDNGNGLGLYDAKKTLESVGGDLQIRSRVGVGTQVILRFPKSAEAVLDRAVATHHP
Specific function: Phosphorylates the sporulation-regulatory protein spo0A [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 44028; Mature: 44028
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENTRSSSQNEIPVKWLSVFAIVSLVVAVLSFGYEVHRAQDSVRQYVGIWEDDIARAKLF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHH QGDPTLQNKILKQLKEVHTAVVKSEVQNPESLQCLISTEVPITLNSLPAGKMAVCFGPSE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCEEEEECCHH LAVKALTSPVFMLGVVLGLILLGFGYRREFLARLHEQKLESELARNKEISEISRQVAHDI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RGPLMALTTLSQLSHDMSTEKKELFDHAVARIKGIAEDLLAKGRKQNAESSAPAVKTSQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH DLTNLMDSLLKEYRFSHPAVNFTWHKHIHSDVVKVNLESVKIQRVVSNLLNNALEALPES HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EAAINLTLMERQDHWLLQIMDNGSGIPEDILPKLAQEGVSYGKDNGNGLGLYDAKKTLES CCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VGGDLQIRSRVGVGTQVILRFPKSAEAVLDRAVATHHP CCCCEEEHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MENTRSSSQNEIPVKWLSVFAIVSLVVAVLSFGYEVHRAQDSVRQYVGIWEDDIARAKLF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHH QGDPTLQNKILKQLKEVHTAVVKSEVQNPESLQCLISTEVPITLNSLPAGKMAVCFGPSE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCEEEEECCHH LAVKALTSPVFMLGVVLGLILLGFGYRREFLARLHEQKLESELARNKEISEISRQVAHDI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RGPLMALTTLSQLSHDMSTEKKELFDHAVARIKGIAEDLLAKGRKQNAESSAPAVKTSQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH DLTNLMDSLLKEYRFSHPAVNFTWHKHIHSDVVKVNLESVKIQRVVSNLLNNALEALPES HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EAAINLTLMERQDHWLLQIMDNGSGIPEDILPKLAQEGVSYGKDNGNGLGLYDAKKTLES CCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VGGDLQIRSRVGVGTQVILRFPKSAEAVLDRAVATHHP CCCCEEEHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8002615; 8002614; 8969500; 9384377 [H]