| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is 42522764
Identifier: 42522764
GI number: 42522764
Start: 1171520
End: 1171987
Strand: Direct
Name: 42522764
Synonym: Bd1234
Alternate gene names: NA
Gene position: 1171520-1171987 (Clockwise)
Preceding gene: 42522763
Following gene: 42522765
Centisome position: 30.97
GC content: 53.21
Gene sequence:
>468_bases ATGGGGAAGTGGCTTATACTTATTCTGACGATCTTCGCTTTATCAACCGGGGTTGCAAACGACGGACTGCCGGTGCCTTT GCCGGACGATCCCTATCCTGGTGAGCCTTATCCTGTACCACCTCCAGCTCCACCGAAAGATGTCCCTTATTCGCTAGGGG GCGGGGAAACCGGACGCTTCGGCACCAGAACTTTTGATTTCTTTCCACGCTATGACCTGAATCGCATCAAACGCATTCGA TTGGTGGGGCTGCGCAACAATCTAGAGATTGTTGAAGTGCATATTCAGTACGCGGATTCCTCCGCTGAGCGCCGCGAGTA TCGGTTGGAAGGAGAATTGAAATCCAGTGGAGTGCGTGAAGCTGCTTTGGACGGGCGGCCGATCTATCGCATATCCGTGA AAGCCTCGCCTTCGTACTTCTGGAAAAAGCCCGGTGGATTCCGAGTTGATGTCATCGCCGTGAAGTGA
Upstream 100 bases:
>100_bases CGTGAAGCACATGCGTTGGGATTGATTTCAGACATATTGTCCGTTCCATGATTTTCAAAAACCCCTCGGGTCGACTAGGG TCATTGCCTAGGAGGCCTGC
Downstream 100 bases:
>100_bases GATATGCCTATTTATCGAGCATGAAATTTAGATATGAAAATGCAAAAAGGTCTCGGTTTGTGGGGGGCTTTTCTGTGATT TTCACCTTTTTTCATGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MGKWLILILTIFALSTGVANDGLPVPLPDDPYPGEPYPVPPPAPPKDVPYSLGGGETGRFGTRTFDFFPRYDLNRIKRIR LVGLRNNLEIVEVHIQYADSSAERREYRLEGELKSSGVREAALDGRPIYRISVKASPSYFWKKPGGFRVDVIAVK
Sequences:
>Translated_155_residues MGKWLILILTIFALSTGVANDGLPVPLPDDPYPGEPYPVPPPAPPKDVPYSLGGGETGRFGTRTFDFFPRYDLNRIKRIR LVGLRNNLEIVEVHIQYADSSAERREYRLEGELKSSGVREAALDGRPIYRISVKASPSYFWKKPGGFRVDVIAVK >Mature_154_residues GKWLILILTIFALSTGVANDGLPVPLPDDPYPGEPYPVPPPAPPKDVPYSLGGGETGRFGTRTFDFFPRYDLNRIKRIRL VGLRNNLEIVEVHIQYADSSAERREYRLEGELKSSGVREAALDGRPIYRISVKASPSYFWKKPGGFRVDVIAVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17330; Mature: 17199
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKWLILILTIFALSTGVANDGLPVPLPDDPYPGEPYPVPPPAPPKDVPYSLGGGETGRF CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC GTRTFDFFPRYDLNRIKRIRLVGLRNNLEIVEVHIQYADSSAERREYRLEGELKSSGVRE CCEEEECCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCHHEEEECCCCCCCCCCC AALDGRPIYRISVKASPSYFWKKPGGFRVDVIAVK HHCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEC >Mature Secondary Structure GKWLILILTIFALSTGVANDGLPVPLPDDPYPGEPYPVPPPAPPKDVPYSLGGGETGRF CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC GTRTFDFFPRYDLNRIKRIRLVGLRNNLEIVEVHIQYADSSAERREYRLEGELKSSGVRE CCEEEECCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCHHEEEECCCCCCCCCCC AALDGRPIYRISVKASPSYFWKKPGGFRVDVIAVK HHCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA