Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

Click here to switch to the map view.

The map label for this gene is 42522722

Identifier: 42522722

GI number: 42522722

Start: 1126444

End: 1127034

Strand: Direct

Name: 42522722

Synonym: Bd1184

Alternate gene names: NA

Gene position: 1126444-1127034 (Clockwise)

Preceding gene: 42522721

Following gene: 42522723

Centisome position: 29.78

GC content: 45.35

Gene sequence:

>591_bases
ATGCATAAAATTGTTGTAAGTTTATTGTTTGTTTTTGGGCCTCACTTTGCGGGGGCTCAAGGCATAAAACCAGTCTCTGT
TTCGTATGAAAACCTCATGCGATGCTTCCCCGAGCTTCAAGATGAAAAGCTGTCATTCAAGGTCGACCTCAACCGACTGA
AGGACATCATGGACGAAAAGTTCGTGACCTCCCAATCGCAGCTGCGTCAAAGAAAGATCCACTATCTGAACGCTGACAAA
GAGCTGATGAACCTGATCCTGCGAACCAAGTTTGCCGGGGCCAAGAAGGTCGAAACTGAACTTATTTTGCAGCAAGTCGA
CGAAAAGGGTGTCATCACCGATATCAAGCTGACAAACAATCAGCGTCTGAATCCAAACCAGGACACGATCAACAACTTCC
TGCTCAATGGAGTGATTAAATCAGACGAATACTCCTATAATGACACGAAGCTTAATAATGTGATCTCGACCTACCGCCGG
AACTTTAAAGAGATCCAGGAGATTGACCTGAACGACCGGGAAGGCAAACGCTCCGTCCACTGTGAAAACCAGAAGGATCT
CGGCATTATATGCACCTGTTCTAAAAAATAA

Upstream 100 bases:

>100_bases
ATGGGAAACTGAATCCCGTGCGTATTGCACGAGTGATGATCAGGAAGGTTGCGACCGTTCTGCCGCATCAAGCTGCACTC
CCATGTAATGGGAAAAGGGA

Downstream 100 bases:

>100_bases
ATCTGTTGAATATCGACCTTTTAGATATATACTTTTCCTTGTGTTGATCTAGGATTTTTCTAGAGTTTTAAAAGGTTTAG
GCATTCGAGGTCGAAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MHKIVVSLLFVFGPHFAGAQGIKPVSVSYENLMRCFPELQDEKLSFKVDLNRLKDIMDEKFVTSQSQLRQRKIHYLNADK
ELMNLILRTKFAGAKKVETELILQQVDEKGVITDIKLTNNQRLNPNQDTINNFLLNGVIKSDEYSYNDTKLNNVISTYRR
NFKEIQEIDLNDREGKRSVHCENQKDLGIICTCSKK

Sequences:

>Translated_196_residues
MHKIVVSLLFVFGPHFAGAQGIKPVSVSYENLMRCFPELQDEKLSFKVDLNRLKDIMDEKFVTSQSQLRQRKIHYLNADK
ELMNLILRTKFAGAKKVETELILQQVDEKGVITDIKLTNNQRLNPNQDTINNFLLNGVIKSDEYSYNDTKLNNVISTYRR
NFKEIQEIDLNDREGKRSVHCENQKDLGIICTCSKK
>Mature_196_residues
MHKIVVSLLFVFGPHFAGAQGIKPVSVSYENLMRCFPELQDEKLSFKVDLNRLKDIMDEKFVTSQSQLRQRKIHYLNADK
ELMNLILRTKFAGAKKVETELILQQVDEKGVITDIKLTNNQRLNPNQDTINNFLLNGVIKSDEYSYNDTKLNNVISTYRR
NFKEIQEIDLNDREGKRSVHCENQKDLGIICTCSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22724; Mature: 22724

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKIVVSLLFVFGPHFAGAQGIKPVSVSYENLMRCFPELQDEKLSFKVDLNRLKDIMDEK
CHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
FVTSQSQLRQRKIHYLNADKELMNLILRTKFAGAKKVETELILQQVDEKGVITDIKLTNN
HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
QRLNPNQDTINNFLLNGVIKSDEYSYNDTKLNNVISTYRRNFKEIQEIDLNDREGKRSVH
CCCCCCHHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
CENQKDLGIICTCSKK
CCCCCCCEEEEEECCC
>Mature Secondary Structure
MHKIVVSLLFVFGPHFAGAQGIKPVSVSYENLMRCFPELQDEKLSFKVDLNRLKDIMDEK
CHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
FVTSQSQLRQRKIHYLNADKELMNLILRTKFAGAKKVETELILQQVDEKGVITDIKLTNN
HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
QRLNPNQDTINNFLLNGVIKSDEYSYNDTKLNNVISTYRRNFKEIQEIDLNDREGKRSVH
CCCCCCHHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
CENQKDLGIICTCSKK
CCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA