Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is ankB

Identifier: 42522697

GI number: 42522697

Start: 1096146

End: 1096628

Strand: Direct

Name: ankB

Synonym: Bd1155

Alternate gene names: NA

Gene position: 1096146-1096628 (Clockwise)

Preceding gene: 42522696

Following gene: 42522698

Centisome position: 28.98

GC content: 55.69

Gene sequence:

>483_bases
ATGGCGACCTGGGAAGAATATAAAAAGACAATGGTGGTGGAACCGCTGATTTTTGAAGAGGCCCGCAACGGCAACTGCGA
GGCCTTGAAGCAGTATCTGGATTTTGGCGGAGGTTTGGAAATTCGTAATTTCAAAGGGCACACGCTGTTGATGCTGGCTG
CGTATAACAATCAGGAGGACGCCGCCGAGTTTCTGATCGAACGCGGGGCGGATGTGAACTCCACCGATGATATGGGGAAC
TCGGTTTTGATGGGGGTTTGTTTTAAGGGACATGCCCGTCTTGCGGAGTTGTTGCTCAGTAACGGCGCTCGCTTGGAGGA
CCGCAACCCCCACGGCATGACGGCTTTGGATCTGGCCAAGGTTTTCGGGCGCAAGGAAGTGGTGTCTTTATTAAGTGACC
GGCCGGCTTCCTGGGCGGACCCGATGGAAGTCGCCTGCCGGCTGATTGCGCGCAAGCTGTCGCGGCCAACACCGGAAGCT
TGA

Upstream 100 bases:

>100_bases
CGATCCTGCTTACGGTAGCGGCTTGGCCGAGCGCATGGGTGTAAAGGTTTATTCAGACAAATATGAAAGTGGCAGTGCCC
ATCATTAGGGCGGAGGATGT

Downstream 100 bases:

>100_bases
TATCATATATAGAGAAAGCACTGCCAGATTGTGTAAACACTGTGCAGTGCTAAGTGCCTTGTTTCATTGTGGTACGTGAT
GGTTTTGTAGAGACGCTTTT

Product: ankyrin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQEDAAEFLIERGADVNSTDDMGN
SVLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAKVFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA

Sequences:

>Translated_160_residues
MATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQEDAAEFLIERGADVNSTDDMGN
SVLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAKVFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA
>Mature_159_residues
ATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQEDAAEFLIERGADVNSTDDMGNS
VLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAKVFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI225543463, Length=122, Percent_Identity=33.6065573770492, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI225543461, Length=122, Percent_Identity=33.6065573770492, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI157739945, Length=120, Percent_Identity=32.5, Blast_Score=69, Evalue=1e-12,
Organism=Homo sapiens, GI17864094, Length=110, Percent_Identity=33.6363636363636, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI62988328, Length=114, Percent_Identity=34.2105263157895, Blast_Score=64, Evalue=4e-11,
Organism=Homo sapiens, GI268607595, Length=114, Percent_Identity=34.2105263157895, Blast_Score=64, Evalue=4e-11,
Organism=Homo sapiens, GI24308163, Length=98, Percent_Identity=37.7551020408163, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI148596917, Length=116, Percent_Identity=34.4827586206897, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24656436, Length=114, Percent_Identity=35.0877192982456, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24656431, Length=114, Percent_Identity=35.0877192982456, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161078304, Length=113, Percent_Identity=34.5132743362832, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571867, Length=130, Percent_Identity=35.3846153846154, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571865, Length=130, Percent_Identity=35.3846153846154, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 17773; Mature: 17641

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQED
CCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCHHH
AAEFLIERGADVNSTDDMGNSVLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAK
HHHHHHHCCCCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
VFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA
HHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQED
CCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCHHH
AAEFLIERGADVNSTDDMGNSVLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAK
HHHHHHHCCCCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
VFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA
HHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]