Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522649

Identifier: 42522649

GI number: 42522649

Start: 1036174

End: 1036788

Strand: Direct

Name: 42522649

Synonym: Bd1100

Alternate gene names: NA

Gene position: 1036174-1036788 (Clockwise)

Preceding gene: 42522642

Following gene: 42522650

Centisome position: 27.39

GC content: 50.41

Gene sequence:

>615_bases
TTGATTTTGCCCTTGTTTTTAAGCTCCATTGCCACAGCCCAAGACTCCCAGCCCGTGGTCGGCCGTGACGCTGCTGCGAA
GTACTTCCAACCGCGTGATACGGCTTCATCTTCTTCGTTCAATACCGGCGGCGGTCCGTCGGATCATTATCTGGCTTTGC
ACTTTGGCCGTTACATGGCTTCACAATCCTATGACTGGGGTAAGAACGGCCAAGAGGACGACGTGGGTAAAAATCAATTC
GGGGTCACTTACCGAGTGGGCGAGTGGTACAACTCCATGGATTTGCTGCTAAGAATGGATTATTCCGAATTCGACGTGGG
CGGTGAAACGCCGAACAAGCTTTCGTTTGTTCCGATGATCACCTTCCCGGATGCGACCTCACGTTTCCCTCTGTATTTTG
GAGCCGGTGCCGGATTGGGTGTGTTCTTTAAACAGGCCTCTGGAAAATCTGCACTGTCCCTGGATTACCAGCTGATCGCC
GGCGCTCGATTCTTCAATATCTTTGAAAACACTGGATTCTTCATTGAAGCTGGTTTAAAAAACCACCTTCTTATTCTGTC
CTCGGGGCAGTTCAACGGAACCTTTTTGGCCACTGGCCTGGTGTTTACATTTTGA

Upstream 100 bases:

>100_bases
CTAGTGTTGATGACTTCGCGTGTCAACGACTTCCTCGCCAGAGGGAAAACTGAATAGAATAGAAGCCAGAATTGAGGTGC
GTGTGAAGACTTTTCTATCG

Downstream 100 bases:

>100_bases
AAATTCACAAGCATCTCGTATCTGAAATCGTTACCGCTCTGGATGAAATCTTTGAACAGGGTTTCTATGCTGACAAAGTC
ATCCAGCGCCATCTGAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMASQSYDWGKNGQEDDVGKNQF
GVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMITFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIA
GARFFNIFENTGFFIEAGLKNHLLILSSGQFNGTFLATGLVFTF

Sequences:

>Translated_204_residues
MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMASQSYDWGKNGQEDDVGKNQF
GVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMITFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIA
GARFFNIFENTGFFIEAGLKNHLLILSSGQFNGTFLATGLVFTF
>Mature_204_residues
MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMASQSYDWGKNGQEDDVGKNQF
GVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMITFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIA
GARFFNIFENTGFFIEAGLKNHLLILSSGQFNGTFLATGLVFTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22355; Mature: 22355

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMA
CCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHH
SQSYDWGKNGQEDDVGKNQFGVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMI
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCHHCCCCCCCCCCEEEEEEE
TFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIAGARFFNIFENTGFFIEAGLK
ECCCCCCCCCEEEECCCCCEEEEECCCCCCEEEECEEEECCHHEEEECCCCCEEEEECCC
NHLLILSSGQFNGTFLATGLVFTF
CEEEEEECCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMA
CCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHH
SQSYDWGKNGQEDDVGKNQFGVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMI
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCHHCCCCCCCCCCEEEEEEE
TFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIAGARFFNIFENTGFFIEAGLK
ECCCCCCCCCEEEECCCCCEEEEECCCCCCEEEECEEEECCHHEEEECCCCCEEEEECCC
NHLLILSSGQFNGTFLATGLVFTF
CEEEEEECCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA