Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522641

Identifier: 42522641

GI number: 42522641

Start: 1030460

End: 1031452

Strand: Direct

Name: 42522641

Synonym: Bd1089

Alternate gene names: NA

Gene position: 1030460-1031452 (Clockwise)

Preceding gene: 42522640

Following gene: 42522642

Centisome position: 27.24

GC content: 49.14

Gene sequence:

>993_bases
ATGGCATTTTTTTTGGTCTTCTTATTTTCCTGGAATGTCTTTGCTGGAGAGCCGGATAACTTTTCCGCCCGCCGTGATAA
AAACGCGGTGGTAGCCAATGCGGAAATCAACCGCGTTGTGAATGCTCTTTTGGTGATGGCGCTTGATAACTACAACTACA
GCAGCAAATCCTGTGATCGCAAAAGATTTTTGAAATATCTGGAAGACGATCTGGATCGCAACCTTCCGCAAATCACCAAA
GCGTTGTATTTCAATGTGCCGCAGGCGGGGCCGAAAGTTCACACCGAGGTCCCTTATGGATCAGGCAAGCCGTACACGCA
GCTTTATTTTTCTCAAAGCGCCAAAGTACAGGTGAAGGATGCCACCTTCATTGTCGGATTTGACAAGATCGACCACTTCT
TTTCTCACGGTTCCATGTATTGGGACATGGTCGGACAGGATCCTAAGCTTCCGGCTGACAAAGTGAAAAAGGCGCTGGAA
GTTGGGATCATGCAGGAAAATGCGACGTGGGGGCTGCAGCGACCCGGTGTGAAATCCTATGCCGATCTGATGGCCAACTA
TAAAGGCCTTTATTTCTGGCGTGATCTGTTTGATGGAGCTCCCCCCTTGATCGTGTGCAAAGACGGAAAGTTTGTGCAAA
ACCGCGAATTTGATCTGGCCAATTACTTTGAACCGGCCATGGATGAAACCATCAATTGCAGCAGCTTCGCCACCCAGGAA
ATTCATGACCGGATCACCGCGGTCACAAAAAAATGGAATATGAATTGTCCGGTGGATGCAAATGCCTGCGAGACGGCCAA
AAAAGTCCATGCGGACAAAGCCGCCTTGCTGCTGCATCCGAAGTGTCGTGGCACGGGAAATTCCCAAATTGAAAAAGCCT
CTCCGATGACCACCAAAGATGTGATCGACACCGCGCAAGCCGCAATGTCCGGCGGCGGGGACTATCTGCTGTTTAAGCTT
TTTGGTGAAAAGAAAAAGAAAGGGGCGCAATAA

Upstream 100 bases:

>100_bases
AGCGTGGCCAGCAGCCCTAGCCGTAGTACCAAGGTCTGATTCTGTTTAGGGCCTTGCAACAAACTGGGAAAAATGACGAT
GCCATTGGATAATAGAACCA

Downstream 100 bases:

>100_bases
TGATTTATCTGCTGTTGCTGTCCCTGGCCTGGTCGGCAGGTGAAAAGGTCGATGTGTCGGAAGCCCGTAAAACCTGGAAG
ACCTTCCGTGCTTGCGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MAFFLVFLFSWNVFAGEPDNFSARRDKNAVVANAEINRVVNALLVMALDNYNYSSKSCDRKRFLKYLEDDLDRNLPQITK
ALYFNVPQAGPKVHTEVPYGSGKPYTQLYFSQSAKVQVKDATFIVGFDKIDHFFSHGSMYWDMVGQDPKLPADKVKKALE
VGIMQENATWGLQRPGVKSYADLMANYKGLYFWRDLFDGAPPLIVCKDGKFVQNREFDLANYFEPAMDETINCSSFATQE
IHDRITAVTKKWNMNCPVDANACETAKKVHADKAALLLHPKCRGTGNSQIEKASPMTTKDVIDTAQAAMSGGGDYLLFKL
FGEKKKKGAQ

Sequences:

>Translated_330_residues
MAFFLVFLFSWNVFAGEPDNFSARRDKNAVVANAEINRVVNALLVMALDNYNYSSKSCDRKRFLKYLEDDLDRNLPQITK
ALYFNVPQAGPKVHTEVPYGSGKPYTQLYFSQSAKVQVKDATFIVGFDKIDHFFSHGSMYWDMVGQDPKLPADKVKKALE
VGIMQENATWGLQRPGVKSYADLMANYKGLYFWRDLFDGAPPLIVCKDGKFVQNREFDLANYFEPAMDETINCSSFATQE
IHDRITAVTKKWNMNCPVDANACETAKKVHADKAALLLHPKCRGTGNSQIEKASPMTTKDVIDTAQAAMSGGGDYLLFKL
FGEKKKKGAQ
>Mature_329_residues
AFFLVFLFSWNVFAGEPDNFSARRDKNAVVANAEINRVVNALLVMALDNYNYSSKSCDRKRFLKYLEDDLDRNLPQITKA
LYFNVPQAGPKVHTEVPYGSGKPYTQLYFSQSAKVQVKDATFIVGFDKIDHFFSHGSMYWDMVGQDPKLPADKVKKALEV
GIMQENATWGLQRPGVKSYADLMANYKGLYFWRDLFDGAPPLIVCKDGKFVQNREFDLANYFEPAMDETINCSSFATQEI
HDRITAVTKKWNMNCPVDANACETAKKVHADKAALLLHPKCRGTGNSQIEKASPMTTKDVIDTAQAAMSGGGDYLLFKLF
GEKKKKGAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37102; Mature: 36970

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFFLVFLFSWNVFAGEPDNFSARRDKNAVVANAEINRVVNALLVMALDNYNYSSKSCDR
CCEEEEEEHHCCEECCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCH
KRFLKYLEDDLDRNLPQITKALYFNVPQAGPKVHTEVPYGSGKPYTQLYFSQSAKVQVKD
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEC
ATFIVGFDKIDHFFSHGSMYWDMVGQDPKLPADKVKKALEVGIMQENATWGLQRPGVKSY
EEEEEEHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCEEECCCCCCCCCCCHHHH
ADLMANYKGLYFWRDLFDGAPPLIVCKDGKFVQNREFDLANYFEPAMDETINCSSFATQE
HHHHHCCCHHHHHHHHHCCCCCEEEECCCCEECCCCCCHHHHCCHHHCCCCCCHHHHHHH
IHDRITAVTKKWNMNCPVDANACETAKKVHADKAALLLHPKCRGTGNSQIEKASPMTTKD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
VIDTAQAAMSGGGDYLLFKLFGEKKKKGAQ
HHHHHHHHHCCCCCEEEEEEECHHHHCCCC
>Mature Secondary Structure 
AFFLVFLFSWNVFAGEPDNFSARRDKNAVVANAEINRVVNALLVMALDNYNYSSKSCDR
CEEEEEEHHCCEECCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCH
KRFLKYLEDDLDRNLPQITKALYFNVPQAGPKVHTEVPYGSGKPYTQLYFSQSAKVQVKD
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEC
ATFIVGFDKIDHFFSHGSMYWDMVGQDPKLPADKVKKALEVGIMQENATWGLQRPGVKSY
EEEEEEHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCEEECCCCCCCCCCCHHHH
ADLMANYKGLYFWRDLFDGAPPLIVCKDGKFVQNREFDLANYFEPAMDETINCSSFATQE
HHHHHCCCHHHHHHHHHCCCCCEEEECCCCEECCCCCCHHHHCCHHHCCCCCCHHHHHHH
IHDRITAVTKKWNMNCPVDANACETAKKVHADKAALLLHPKCRGTGNSQIEKASPMTTKD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
VIDTAQAAMSGGGDYLLFKLFGEKKKKGAQ
HHHHHHHHHCCCCCEEEEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA