| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is splA
Identifier: 42522555
GI number: 42522555
Start: 938849
End: 939724
Strand: Direct
Name: splA
Synonym: Bd0994
Alternate gene names: NA
Gene position: 938849-939724 (Clockwise)
Preceding gene: 42522554
Following gene: 42522556
Centisome position: 24.82
GC content: 52.4
Gene sequence:
>876_bases ATGAAACTGTGGAAGGCCGCCCTTGCCGGGGCCCTTATCATGAATCTTGTCGGGTGCGGAGGTGACTCTGCACCTTCGGC ATTTGTAAACACTGATGGGACACTGACCCAGGGTGTGATTTATGGCGAGGACTCCATTCAGGAGGTTTCCACTGCGGACC GCAACACCCGCGCCAACGTGGCGCTGGTTCATTTGGACAAATGGAATGAGATCATCAAAGGCGAGGCTATCTGGACCGTT GATGAGGTCTACGGCACGGGTCAGCAGCTTCCGTGGAGTGGCCAGGAGTCCAAGGCCTTTTGTTCTGGTACTTTGGTGGC TCCGAAGATGGTTCTGACAGCGGGACATTGTTTTACCGAGGACCATTCGTGTGAAAATACCGTATTTGTTTTTAATGACG AGCAGAAGATGGACGGGGCCACCACCCGCAAGGGCTGGCATTGCAAACAGATCGTAGCCCAGAAAAATGACTTCCAGAGC GGATTGGACTATGCCCTGGTTGAGGTGTCCATGCCTAAGGATGAAGTCGAGCCCGCTATCATGTCGACGGCCGTGTCGTT GGTCGGGGACTCGGTGTACTCCATCGGGTATCCGCTGGGCAGCCTTAAGAAAACCGCCCAGGGTAAAGTGCGCCGTGTGA ATGAAATGGGATCTTTAGAGACGAATCTGGATGTTTTCGTCGGAAACTCAGGTTCTCCGGTGTTTGACAGTAAAACTCAT GAATTGATCGGAGTCCTGCACGGTGGTGAAGATGACTTCCAGCCGGACAGCGAAGATGGTTCTGTTCAGATCATGAAATG CGCAGAGGACGACTGTAAGGGCGAATTCGTCATTCCTATTCAGAAAATTCTGGCCGATATCGAGAAACAGAAGTAA
Upstream 100 bases:
>100_bases AAAACGAAGTTGTGGACTCTGAAAACGTGGAAGGTCGTTGGGAACAAGGCCACATGGCTGAAGCTCACCGCGATGACGTA GACTTCACTAAAGGACACTA
Downstream 100 bases:
>100_bases GTTGGGCCATGCTTCTCATCAATACACATAAGCTCGAAAAATCCTTTGCGGGGAAAACCCTGTTTAAAAACGTCTCTTTG GGCATTGAAGAGGGCGAACG
Product: serine protease SplA
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKLWKAALAGALIMNLVGCGGDSAPSAFVNTDGTLTQGVIYGEDSIQEVSTADRNTRANVALVHLDKWNEIIKGEAIWTV DEVYGTGQQLPWSGQESKAFCSGTLVAPKMVLTAGHCFTEDHSCENTVFVFNDEQKMDGATTRKGWHCKQIVAQKNDFQS GLDYALVEVSMPKDEVEPAIMSTAVSLVGDSVYSIGYPLGSLKKTAQGKVRRVNEMGSLETNLDVFVGNSGSPVFDSKTH ELIGVLHGGEDDFQPDSEDGSVQIMKCAEDDCKGEFVIPIQKILADIEKQK
Sequences:
>Translated_291_residues MKLWKAALAGALIMNLVGCGGDSAPSAFVNTDGTLTQGVIYGEDSIQEVSTADRNTRANVALVHLDKWNEIIKGEAIWTV DEVYGTGQQLPWSGQESKAFCSGTLVAPKMVLTAGHCFTEDHSCENTVFVFNDEQKMDGATTRKGWHCKQIVAQKNDFQS GLDYALVEVSMPKDEVEPAIMSTAVSLVGDSVYSIGYPLGSLKKTAQGKVRRVNEMGSLETNLDVFVGNSGSPVFDSKTH ELIGVLHGGEDDFQPDSEDGSVQIMKCAEDDCKGEFVIPIQKILADIEKQK >Mature_291_residues MKLWKAALAGALIMNLVGCGGDSAPSAFVNTDGTLTQGVIYGEDSIQEVSTADRNTRANVALVHLDKWNEIIKGEAIWTV DEVYGTGQQLPWSGQESKAFCSGTLVAPKMVLTAGHCFTEDHSCENTVFVFNDEQKMDGATTRKGWHCKQIVAQKNDFQS GLDYALVEVSMPKDEVEPAIMSTAVSLVGDSVYSIGYPLGSLKKTAQGKVRRVNEMGSLETNLDVFVGNSGSPVFDSKTH ELIGVLHGGEDDFQPDSEDGSVQIMKCAEDDCKGEFVIPIQKILADIEKQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.21.7
Molecular weight: Translated: 31488; Mature: 31488
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLWKAALAGALIMNLVGCGGDSAPSAFVNTDGTLTQGVIYGEDSIQEVSTADRNTRANV CCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHCCCCCCCCE ALVHLDKWNEIIKGEAIWTVDEVYGTGQQLPWSGQESKAFCSGTLVAPKMVLTAGHCFTE EEEEECCHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHEECCCCCCC DHSCENTVFVFNDEQKMDGATTRKGWHCKQIVAQKNDFQSGLDYALVEVSMPKDEVEPAI CCCCCCEEEEECCCHHCCCCCCCCCCHHHHHHHCCCCHHCCCCEEEEEEECCHHHHHHHH MSTAVSLVGDSVYSIGYPLGSLKKTAQGKVRRVNEMGSLETNLDVFVGNSGSPVFDSKTH HHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC ELIGVLHGGEDDFQPDSEDGSVQIMKCAEDDCKGEFVIPIQKILADIEKQK EEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHCCC >Mature Secondary Structure MKLWKAALAGALIMNLVGCGGDSAPSAFVNTDGTLTQGVIYGEDSIQEVSTADRNTRANV CCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHCCCCCCCCE ALVHLDKWNEIIKGEAIWTVDEVYGTGQQLPWSGQESKAFCSGTLVAPKMVLTAGHCFTE EEEEECCHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHEECCCCCCC DHSCENTVFVFNDEQKMDGATTRKGWHCKQIVAQKNDFQSGLDYALVEVSMPKDEVEPAI CCCCCCEEEEECCCHHCCCCCCCCCCHHHHHHHCCCCHHCCCCEEEEEEECCHHHHHHHH MSTAVSLVGDSVYSIGYPLGSLKKTAQGKVRRVNEMGSLETNLDVFVGNSGSPVFDSKTH HHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC ELIGVLHGGEDDFQPDSEDGSVQIMKCAEDDCKGEFVIPIQKILADIEKQK EEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA